MELO3C013349 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013349
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSKP1-like protein
Locationchr1 : 15986370 .. 15988095 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTCACTTTTTGAATCTTTCGAATCGTCGCTTGTCAGTTAGGGTTTCTTCATATTCCCCGAATCGGGAACAACCCATCGACCAAATTCTCTCAACACAATGTCGTCCTCTAAGAAGATCGTTCTCAGGAGTTCCGACGGCGAAACCTTTGACGTCGATGAAATCGTCGCAGTCGAGTCTCAGACCATCAAGCACATGATCGAAGACGATTGTGTTGACACTGTTATTCCCTTGCCTAATGTTACCAGTGCCATTCTTTCTAAGGTAGTTGAGTATTGTAAGATGCATGTTGAGACCGATGATAAAGATTCTAAAGTCATTGATGATACTCTCAAAACCTGGGATGCTGAATTTGTTAAGGTTGATCAAAATACTCTTTTTGATCTCATCTTGGTGAGTTCTTTTTTTCCTCTCTCTGGAATTATGAAAATTCATGGTGTTTCTCAGTGAATTTGATTTTTCTTGTTTCTCCGTTTTACTCTGTCGATAATTTGGGGTTCTGGATTGTCATTTGATGATGTTTTTTCTTGCTATGTCCTTCTCTCATTTCTTCTACGAATTGGCTTCTTTGCGATTTCTTTTGTTGATTGGATGATCGGATATATCCTTCGAATGATCTTGCTTCCTTGTTTTAGAAAGAACCCTGGAATTGAAGAGTACTCTCAATCAATGAATCACTTAGGCCCGTTTGGTAAACCTTATTGGTTTTTGGAAACTAAGCCTATTTCGTCTCGTTTTCGTACATTTGCATCTTTAGTGGTGAATTCTGGGCCAAATTCCAGTTTTTTTTTTAAAAAAAACTTTTTTTGTAGTGTTCAAAATTTGACTTGGTTTTTGAAACAATCAAGAAATTTAGAGGTGTAAAAAGTGTTGAGAAAATTATAAACAAAAGACTTAGTTCATCATGTTTCTTTGGGATGGTATGTTTGGTTGATTATTCTAACATGATTTAGGAGGCCAAACTTCAAAGGGTTCCCCTTTTGCTGTATTTTATTGGATTAAGCAACAATCATCAAATTGGTTTAAGCCCATTAAACCTTTTCCCTCAAAATTTTTAGTGATTAGGACGAGGTAGCAAAGGATGCTTCTATCAAAACTGGAATTCCTCAGTTACAAATCATATCAATTTGGTTATTTAATGTCTCCACAGCATTGTTTATGAGATTTATTCACAACACAAGTAATATTTGTTGTATAAATTCTCTATGCATGGGTCTTTTTTATTTTCAATACTGGCTATGGCTTATAATGGGTGTTTTTCTTTTGTTTTGTTTTGTTTTTTTTATTTTTTGGTGCTCCCAAAAATCAGGCTGCTAACTACCTGAACATCAAGAGTCTGCTGGATCTAACATGCCAGACAGTGGCAGATATGATCAAAGGAAAGACACCAGAGGAAATTCGAAAGACATTCAACATCAAGAATGATTTTACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTCGAGTAGTAATATAATACAGTCATTTTTAATTTGATTATATAATAGTAATTAATCAATGTCTTTGTAATGTCTATAAGATTTTAGGGAAGTTAGACTCTTTTCATTTCACTTTCTGGGATGCTCTAAGTTGTAACTTCTCTCTCTTTTTATCGAAGATCAATATCTAGTTTTTGTGGATTTCATATACTTTTCTGTGGAAGCCAATGTCTCAACGTTATCATCTTTAACCTTACGAATACTGTATTTT

mRNA sequence

ATTTTTCACTTTTTGAATCTTTCGAATCGTCGCTTGTCAGTTAGGGTTTCTTCATATTCCCCGAATCGGGAACAACCCATCGACCAAATTCTCTCAACACAATGTCGTCCTCTAAGAAGATCGTTCTCAGGAGTTCCGACGGCGAAACCTTTGACGTCGATGAAATCGTCGCAGTCGAGTCTCAGACCATCAAGCACATGATCGAAGACGATTGTGTTGACACTGTTATTCCCTTGCCTAATGTTACCAGTGCCATTCTTTCTAAGGTAGTTGAGTATTGTAAGATGCATGTTGAGACCGATGATAAAGATTCTAAAGTCATTGATGATACTCTCAAAACCTGGGATGCTGAATTTGTTAAGGTTGATCAAAATACTCTTTTTGATCTCATCTTGGCTGCTAACTACCTGAACATCAAGAGTCTGCTGGATCTAACATGCCAGACAGTGGCAGATATGATCAAAGGAAAGACACCAGAGGAAATTCGAAAGACATTCAACATCAAGAATGATTTTACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTCGAGTAGTAATATAATACAGTCATTTTTAATTTGATTATATAATAGTAATTAATCAATGTCTTTGTAATGTCTATAAGATTTTAGGGAAGTTAGACTCTTTTCATTTCACTTTCTGGGATGCTCTAAGTTGTAACTTCTCTCTCTTTTTATCGAAGATCAATATCTAGTTTTTGTGGATTTCATATACTTTTCTGTGGAAGCCAATGTCTCAACGTTATCATCTTTAACCTTACGAATACTGTATTTT

Coding sequence (CDS)

ATGTCGTCCTCTAAGAAGATCGTTCTCAGGAGTTCCGACGGCGAAACCTTTGACGTCGATGAAATCGTCGCAGTCGAGTCTCAGACCATCAAGCACATGATCGAAGACGATTGTGTTGACACTGTTATTCCCTTGCCTAATGTTACCAGTGCCATTCTTTCTAAGGTAGTTGAGTATTGTAAGATGCATGTTGAGACCGATGATAAAGATTCTAAAGTCATTGATGATACTCTCAAAACCTGGGATGCTGAATTTGTTAAGGTTGATCAAAATACTCTTTTTGATCTCATCTTGGCTGCTAACTACCTGAACATCAAGAGTCTGCTGGATCTAACATGCCAGACAGTGGCAGATATGATCAAAGGAAAGACACCAGAGGAAATTCGAAAGACATTCAACATCAAGAATGATTTTACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTCGAGTAG

Protein sequence

MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE*
Homology
[Close]
BLAST of MELO3C013349 vs. Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-65
Identity = 125/171 (73.10%), Postives = 134/171 (78.36%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MS+ +KI L+SSDGE F++DE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KMHVETDDKDSKVID----------------DTLKTWDAEFVKVDQNTLFDLILAANYLN 120
           K HVE  +K     D                + LKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]
BLAST of MELO3C013349 vs. Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.2e-64
Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           S+KKIVL+SSDGE+F+V+E VA+ESQTI HM+EDDCVD  +PLPNVTS IL+KV+EYCK 
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVETDDKDSKVI------DDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTV 122
           HVE     ++ +      DD LK WDA+F+K+DQ TLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 123 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]
BLAST of MELO3C013349 vs. Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-56
Identity = 109/160 (68.12%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           + K I+L+SSDGE+F+++E VAV+SQTIKHMIEDDC D  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 122
           HVE       DKD      +D LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123

Query: 123 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]
BLAST of MELO3C013349 vs. Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.1e-55
Identity = 107/160 (66.88%), Postives = 124/160 (77.50%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           + K I+L+SSDGE+F+V+E VAVESQTIKHMIEDDCVD  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 122
           HVE       DKD      +  LKTWD +FVKVD  TLFDL+ AANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123

Query: 123 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           VAD ++GKTP ++R+ FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

[Close]
BLAST of MELO3C013349 vs. Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.0e-55
Identity = 105/153 (68.63%), Postives = 125/153 (81.70%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           SSK IVL SSDG++F+V+E VA++SQTI HM+EDDCV   IPL NV S IL KV+EYCK 
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  HVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKG 122
           H    D+ + + ++ L  WD +F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 62  HHV--DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKG 121

Query: 123 KTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]
BLAST of MELO3C013349 vs. TrEMBL
Match: A0A0A0K4P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G012950 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.5e-81
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDC DTVIPLPNVTSAILSKV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]
BLAST of MELO3C013349 vs. TrEMBL
Match: A0A0S2C4U1_CITRE (WSKP1 protein OS=Citrus reticulata GN=WSKP1 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.0e-69
Identity = 132/158 (83.54%), Postives = 143/158 (90.51%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSS KKI L+SSDGETF+V+E VA+ES+TIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESRTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 61  KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA
Sbjct: 61  KKHVEARSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120

Query: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

[Close]
BLAST of MELO3C013349 vs. TrEMBL
Match: A0A067FL58_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031498mg PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.0e-69
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 61  KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

[Close]
BLAST of MELO3C013349 vs. TrEMBL
Match: V4SFP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029465mg PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.0e-69
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 61  KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

[Close]
BLAST of MELO3C013349 vs. TrEMBL
Match: B9R8D3_RICCO (Skp1, putative OS=Ricinus communis GN=RCOM_1598810 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-68
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MS+S+KI L+SSDGETF+VDE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KMHVETDDKDSKV--IDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVAD 120
           K HVET   D +   +DD LKTWDAEFVKVDQ TLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]
BLAST of MELO3C013349 vs. TAIR10
Match: AT5G42190.1 (AT5G42190.1 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-66
Identity = 125/171 (73.10%), Postives = 134/171 (78.36%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MS+ +KI L+SSDGE F++DE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KMHVETDDKDSKVID----------------DTLKTWDAEFVKVDQNTLFDLILAANYLN 120
           K HVE  +K     D                + LKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]
BLAST of MELO3C013349 vs. TAIR10
Match: AT1G75950.1 (AT1G75950.1 S phase kinase-associated protein 1)

HSP 1 Score: 244.6 bits (623), Expect = 4.1e-65
Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           S+KKIVL+SSDGE+F+V+E VA+ESQTI HM+EDDCVD  +PLPNVTS IL+KV+EYCK 
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVETDDKDSKVI------DDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTV 122
           HVE     ++ +      DD LK WDA+F+K+DQ TLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 123 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]
BLAST of MELO3C013349 vs. TAIR10
Match: AT1G20140.1 (AT1G20140.1 SKP1-like 4)

HSP 1 Score: 220.3 bits (560), Expect = 8.2e-58
Identity = 109/160 (68.12%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           + K I+L+SSDGE+F+++E VAV+SQTIKHMIEDDC D  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 122
           HVE       DKD      +D LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123

Query: 123 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]
BLAST of MELO3C013349 vs. TAIR10
Match: AT2G25700.1 (AT2G25700.1 SKP1-like 3)

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-56
Identity = 107/160 (66.88%), Postives = 124/160 (77.50%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           + K I+L+SSDGE+F+V+E VAVESQTIKHMIEDDCVD  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 122
           HVE       DKD      +  LKTWD +FVKVD  TLFDL+ AANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123

Query: 123 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           VAD ++GKTP ++R+ FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

[Close]
BLAST of MELO3C013349 vs. TAIR10
Match: AT4G34210.1 (AT4G34210.1 SKP1-like 11)

HSP 1 Score: 214.5 bits (545), Expect = 4.5e-56
Identity = 105/153 (68.63%), Postives = 125/153 (81.70%), Query Frame = 1 

Query: 3   SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 62
           SSK IVL SSDG++F+V+E VA++SQTI HM+EDDCV   IPL NV S IL KV+EYCK 
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  HVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKG 122
           H    D+ + + ++ L  WD +F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 62  HHV--DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKG 121

Query: 123 KTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]
BLAST of MELO3C013349 vs. NCBI nr
Match: gi|659094228|ref|XP_008447950.1| (PREDICTED: SKP1-like protein 1B [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.7e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60

Query: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]
BLAST of MELO3C013349 vs. NCBI nr
Match: gi|449454215|ref|XP_004144851.1| (PREDICTED: SKP1-like protein 1B [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 6.5e-81
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDC DTVIPLPNVTSAILSKV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]
BLAST of MELO3C013349 vs. NCBI nr
Match: gi|950655873|gb|ALN39177.1| (WSKP1 protein [Citrus reticulata])

HSP 1 Score: 268.9 bits (686), Expect = 5.7e-69
Identity = 132/158 (83.54%), Postives = 143/158 (90.51%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSS KKI L+SSDGETF+V+E VA+ES+TIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESRTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 61  KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA
Sbjct: 61  KKHVEARSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120

Query: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

[Close]
BLAST of MELO3C013349 vs. NCBI nr
Match: gi|567859864|ref|XP_006422586.1| (hypothetical protein CICLE_v10029465mg [Citrus clementina])

HSP 1 Score: 268.9 bits (686), Expect = 5.7e-69
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 61  KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

[Close]
BLAST of MELO3C013349 vs. NCBI nr
Match: gi|255539022|ref|XP_002510576.1| (PREDICTED: SKP1-like protein 1B [Ricinus communis])

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 1 

Query: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60
           MS+S+KI L+SSDGETF+VDE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KMHVETDDKDSKV--IDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVAD 120
           K HVET   D +   +DD LKTWDAEFVKVDQ TLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

The following BLAST results are available for this feature:
BLAST of MELO3C013349 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKP1B_ARATH2.3e-6573.10SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1[more]
SKP1A_ARATH7.2e-6474.84SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1[more]
ASK4_ARATH1.5e-5668.13SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1[more]
ASK3_ARATH6.1e-5566.88SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1[more]
ASK11_ARATH8.0e-5568.63SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1[more]
BLAST of MELO3C013349 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4P4_CUCSA4.5e-8198.71Uncharacterized protein OS=Cucumis sativus GN=Csa_7G012950 PE=3 SV=1[more]
A0A0S2C4U1_CITRE4.0e-6983.54WSKP1 protein OS=Citrus reticulata GN=WSKP1 PE=2 SV=1[more]
A0A067FL58_CITSI4.0e-6983.54Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031498mg PE=3 SV=1[more]
V4SFP4_9ROSI4.0e-6983.54Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029465mg PE=3 SV=1[more]
B9R8D3_RICCO1.2e-6884.71Skp1, putative OS=Ricinus communis GN=RCOM_1598810 PE=3 SV=1[more]
BLAST of MELO3C013349 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42190.11.3e-6673.10 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein[more]
AT1G75950.14.1e-6574.84 S phase kinase-associated protein 1[more]
AT1G20140.18.2e-5868.13 SKP1-like 4[more]
AT2G25700.13.5e-5666.88 SKP1-like 3[more]
AT4G34210.14.5e-5668.63 SKP1-like 11[more]
BLAST of MELO3C013349 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094228|ref|XP_008447950.1|1.7e-81100.00PREDICTED: SKP1-like protein 1B [Cucumis melo][more]
gi|449454215|ref|XP_004144851.1|6.5e-8198.71PREDICTED: SKP1-like protein 1B [Cucumis sativus][more]
gi|950655873|gb|ALN39177.1|5.7e-6983.54WSKP1 protein [Citrus reticulata][more]
gi|567859864|ref|XP_006422586.1|5.7e-6983.54hypothetical protein CICLE_v10029465mg [Citrus clementina][more]
gi|255539022|ref|XP_002510576.1|1.7e-6884.71PREDICTED: SKP1-like protein 1B [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR011333SKP1/BTB/POZ_sf
IPR016072Skp1_comp_dimer
IPR016073Skp1_comp_POZ
IPR016897SKP1
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46613melon EST collection version 4.0transcribed_cluster
MU47628melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013349T1MELO3C013349T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46613MU46613transcribed_cluster
MU47628MU47628transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 4..105
score: 5.6
IPR011333SKP1/BTB/POZ domainunknownSSF54695POZ domaincoord: 6..67
score: 9.42
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 106..153
score: 7.8
IPR016072SKP1 component, dimerisationunknownSSF81382Skp1 dimerisation domain-likecoord: 78..153
score: 7.59
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 5..64
score: 2.0
IPR016897S-phase kinase-associated protein 1PIRPIRSF028729SCF_Skpcoord: 1..155
score: 2.2
NoneNo IPR availableGENE3DG3DSA:3.30.710.10coord: 2..155
score: 3.7
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 1..155
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C013349Csa7G012950Cucumber (Chinese Long) v2cumeB531
MELO3C013349Cla015822Watermelon (97103) v1mewmB239
MELO3C013349ClCG02G004050Watermelon (Charleston Gray)mewcgB196
MELO3C013349Cla97C02G030870Watermelon (97103) v2mewmbB179
MELO3C013349CSPI07G01030Wild cucumber (PI 183967)cpimeB539
MELO3C013349Cucsa.370480Cucumber (Gy14) v1cgymeB603
MELO3C013349CmoCh11G017450Cucurbita moschata (Rifu)cmomeB091
MELO3C013349Lsi11G012050Bottle gourd (USVL1VR-Ls)lsimeB096
MELO3C013349Cp4.1LG04g04850Cucurbita pepo (Zucchini)cpemeB610
MELO3C013349Carg03976Silver-seed gourdcarmeB0952
MELO3C013349Carg05711Silver-seed gourdcarmeB0988
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013349Cucumber (Gy14) v2cgybmeB088
MELO3C013349Cucumber (Gy14) v2cgybmeB469
MELO3C013349Silver-seed gourdcarmeB0321
MELO3C013349Silver-seed gourdcarmeB0353
MELO3C013349Silver-seed gourdcarmeB0801
MELO3C013349Cucumber (Chinese Long) v3cucmeB106
MELO3C013349Cucumber (Chinese Long) v3cucmeB549
MELO3C013349Watermelon (97103) v2mewmbB184
MELO3C013349Wax gourdmewgoB213
MELO3C013349Wax gourdmewgoB231
MELO3C013349Melon (DHL92) v3.5.1memeB038
MELO3C013349Cucumber (Gy14) v1cgymeB394
MELO3C013349Cucurbita maxima (Rimu)cmameB092
MELO3C013349Cucurbita maxima (Rimu)cmameB462
MELO3C013349Cucurbita maxima (Rimu)cmameB510
MELO3C013349Cucurbita maxima (Rimu)cmameB565
MELO3C013349Cucurbita moschata (Rifu)cmomeB453
MELO3C013349Cucurbita moschata (Rifu)cmomeB503
MELO3C013349Cucurbita moschata (Rifu)cmomeB554
MELO3C013349Wild cucumber (PI 183967)cpimeB102
MELO3C013349Cucumber (Chinese Long) v2cumeB104
MELO3C013349Watermelon (Charleston Gray)mewcgB201
MELO3C013349Watermelon (97103) v1mewmB247
MELO3C013349Cucurbita pepo (Zucchini)cpemeB224
MELO3C013349Cucurbita pepo (Zucchini)cpemeB272
MELO3C013349Bottle gourd (USVL1VR-Ls)lsimeB064