MU46613 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU46613
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSkp1, putative
Locationchr1 : 15986387 .. 15988096 (-)
Sequence length795
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GATTTTTCACTTTTTGAATCTTTCGAATCGTCGCTTGTCAGTTAGGGTTTCTTCATATTCCCCGAATCGGGAACAACCCATCGACCAAATTCTCTCAACACAATGTCGTCCTCTAAGAAGATCGTTCTCAGGAGTTCCGACGGCGAAACCTTTGACGTCGATGAAATCGTCGCAGTCGAGTCTCAGACCATCAAGCACATGATCGAAGACGATTGTGTTGACACTGTTATTCCCTTGCCTAATGTTACCAGTGCCATTCTTTCTAAGGTAGTTGAGTATTGTAAGATGCATGTTGAGACCGATGATAAAGATTCTAAAGTCATTGATGATACTCTCAAAACCTGGGATGCTGAATTTGTTAAGGTTGATCAAAATACTCTTTTTGATCTCATCTTGGCTGCTAACTACCTGAACATCAAGAGTCTGCTGGATCTAACATGCCAGACAGTGGCAGATATGATCAAAGGAAAGACACCAGAGGAAATTCGAAAGACATTCAACATCAAGAATGATTTTACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTCGAGTAGTAATATAATACAGTCATTTTTAATTTGATTATATAATAGTAATTAATCAATGTCTTTGTAATGTCTATAAGATTTTAGGGAAGTTAGACTCTTTTCATTTCACTTTCTGGGATGCTCTAAGTTGTAACTTCTCTCTCTTTTTATCGAAGATCAATATCTAGTTTTTGTGGATTTCATATACTTTTCTGTGGAAAGCAATGTCTCAACGTTATCATCTTTAACCTG
Homology
[Close]
BLAST of MU46613 vs. Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.3e-59
Identity = 116/171 (67.84%), Postives = 125/171 (73.10%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MS+ +KI L+SSDGE F++DE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 163 KMHVETDDKDSKVID----------------DTLKTWDAEFVKVDQNTLFDLILAANYLN 222
           K HVE  +K     D                + LKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 223 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

Query: 283  342
           
Sbjct: 181  171

Query: 343  402
           
Sbjct: 241  171

Query: 403  462
           
Sbjct: 301  171

Query: 463  522
           
Sbjct: 361  171

Query: 523  568
           
Sbjct: 421  171

[Close]
BLAST of MU46613 vs. Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-57
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           S+KKIVL+SSDGE+F+V+E VA+ESQTI HM+EDDCVD  +PLPNVTS IL+KV+EYCK 
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 169 HVETDDKDSKVI------DDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTV 228
           HVE     ++ +      DD LK WDA+F+K+DQ TLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 229 ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           ADMIKGKTPEEIR TFNIKNDFTP         NQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

Query: 289  348
           
Sbjct: 182  160

Query: 349  408
           
Sbjct: 242  160

Query: 409  468
           
Sbjct: 302  160

Query: 469  528
           
Sbjct: 362  160

Query: 529  568
           
Sbjct: 422  160

[Close]
BLAST of MU46613 vs. Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.8e-51
Identity = 102/160 (63.75%), Postives = 119/160 (74.38%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           + K I+L+SSDGE+F+++E VAV+SQTIKHMIEDDC D  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 169 HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 228
           HVE       DKD      +D LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123

Query: 229 VADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           VAD ++GKTPE++R  FNIKND+TP         N+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

Query: 289  348
           
Sbjct: 184  163

Query: 349  408
           
Sbjct: 244  163

Query: 409  468
           
Sbjct: 304  163

Query: 469  528
           
Sbjct: 364  163

Query: 529  568
           
Sbjct: 424  163

[Close]
BLAST of MU46613 vs. Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.7e-50
Identity = 100/160 (62.50%), Postives = 117/160 (73.12%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           + K I+L+SSDGE+F+V+E VAVESQTIKHMIEDDCVD  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63

Query: 169 HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 228
           HVE       DKD      +  LKTWD +FVKVD  TLFDL+ AANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123

Query: 229 VADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           VAD ++GKTP ++R+ FNIKND+TP         N+WAFE
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

Query: 289  348
           
Sbjct: 184  163

Query: 349  408
           
Sbjct: 244  163

Query: 409  468
           
Sbjct: 304  163

Query: 469  528
           
Sbjct: 364  163

Query: 529  568
           
Sbjct: 424  163

[Close]
BLAST of MU46613 vs. Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-49
Identity = 98/153 (64.05%), Postives = 117/153 (76.47%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           SSK IVL SSDG++F+V+E VA++SQTI HM+EDDCV   IPL NV S IL KV+EYCK 
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 169 HVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKG 228
           H    D+ + + ++ L  WD +F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 62  HHV--DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKG 121

Query: 229 KTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           KTPEEIR TFNI+NDFTP         NQWAFE
Sbjct: 122 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

Query: 289  348
           
Sbjct: 182  152

Query: 349  408
           
Sbjct: 242  152

Query: 409  468
           
Sbjct: 302  152

Query: 469  528
           
Sbjct: 362  152

Query: 529  568
           
Sbjct: 422  152

[Close]
BLAST of MU46613 vs. TrEMBL
Match: A0A0A0K4P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G012950 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 144/155 (92.90%), Postives = 145/155 (93.55%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDC DTVIPLPNVTSAILSKV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 163 KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 222
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 223 KGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           KGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

Query: 283  342
           
Sbjct: 181  155

Query: 343  402
           
Sbjct: 241  155

Query: 403  462
           
Sbjct: 301  155

Query: 463  522
           
Sbjct: 361  155

Query: 523  568
           
Sbjct: 421  155

[Close]
BLAST of MU46613 vs. TrEMBL
Match: V4SFP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029465mg PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 124/158 (78.48%), Postives = 133/158 (84.18%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 163 KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 222
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 223 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           DMIKGKTPEEIRKTFNIKNDF+P         NQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

Query: 283  342
           
Sbjct: 181  158

Query: 343  402
           
Sbjct: 241  158

Query: 403  462
           
Sbjct: 301  158

Query: 463  522
           
Sbjct: 361  158

Query: 523  568
           
Sbjct: 421  158

[Close]
BLAST of MU46613 vs. TrEMBL
Match: A0A067FL58_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031498mg PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 124/158 (78.48%), Postives = 133/158 (84.18%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 163 KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 222
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 223 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           DMIKGKTPEEIRKTFNIKNDF+P         NQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

Query: 283  342
           
Sbjct: 181  158

Query: 343  402
           
Sbjct: 241  158

Query: 403  462
           
Sbjct: 301  158

Query: 463  522
           
Sbjct: 361  158

Query: 523  568
           
Sbjct: 421  158

[Close]
BLAST of MU46613 vs. TrEMBL
Match: A0A0S2C4U1_CITRE (WSKP1 protein OS=Citrus reticulata GN=WSKP1 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 124/158 (78.48%), Postives = 134/158 (84.81%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSS KKI L+SSDGETF+V+E VA+ES+TIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESRTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 163 KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 222
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA
Sbjct: 61  KKHVEARSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120

Query: 223 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           DMIKGKTPEEIRKTFNIKNDF+P         NQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

Query: 283  342
           
Sbjct: 181  158

Query: 343  402
           
Sbjct: 241  158

Query: 403  462
           
Sbjct: 301  158

Query: 463  522
           
Sbjct: 361  158

Query: 523  568
           
Sbjct: 421  158

[Close]
BLAST of MU46613 vs. TrEMBL
Match: B9R8D3_RICCO (Skp1, putative OS=Ricinus communis GN=RCOM_1598810 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.8e-62
Identity = 124/157 (78.98%), Postives = 132/157 (84.08%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MS+S+KI L+SSDGETF+VDE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 163 KMHVETDDKDSKV--IDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVAD 222
           K HVET   D +   +DD LKTWDAEFVKVDQ TLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 223 MIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           MIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

Query: 283  342
           
Sbjct: 181  157

Query: 343  402
           
Sbjct: 241  157

Query: 403  462
           
Sbjct: 301  157

Query: 463  522
           
Sbjct: 361  157

Query: 523  568
           
Sbjct: 421  157

[Close]
BLAST of MU46613 vs. TAIR10
Match: AT5G42190.1 (AT5G42190.1 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein)

HSP 1 Score: 229.2 bits (583), Expect = 3.0e-60
Identity = 116/171 (67.84%), Postives = 125/171 (73.10%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MS+ +KI L+SSDGE F++DE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 163 KMHVETDDKDSKVID----------------DTLKTWDAEFVKVDQNTLFDLILAANYLN 222
           K HVE  +K     D                + LKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 223 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

Query: 283  342
           
Sbjct: 181  171

Query: 343  402
           
Sbjct: 241  171

Query: 403  462
           
Sbjct: 301  171

Query: 463  522
           
Sbjct: 361  171

Query: 523  568
           
Sbjct: 421  171

[Close]
BLAST of MU46613 vs. TAIR10
Match: AT1G75950.1 (AT1G75950.1 S phase kinase-associated protein 1)

HSP 1 Score: 224.2 bits (570), Expect = 9.7e-59
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           S+KKIVL+SSDGE+F+V+E VA+ESQTI HM+EDDCVD  +PLPNVTS IL+KV+EYCK 
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 169 HVETDDKDSKVI------DDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTV 228
           HVE     ++ +      DD LK WDA+F+K+DQ TLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 229 ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           ADMIKGKTPEEIR TFNIKNDFTP         NQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

Query: 289  348
           
Sbjct: 182  160

Query: 349  408
           
Sbjct: 242  160

Query: 409  468
           
Sbjct: 302  160

Query: 469  528
           
Sbjct: 362  160

Query: 529  568
           
Sbjct: 422  160

[Close]
BLAST of MU46613 vs. TAIR10
Match: AT1G20140.1 (AT1G20140.1 SKP1-like 4)

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 102/160 (63.75%), Postives = 119/160 (74.38%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           + K I+L+SSDGE+F+++E VAV+SQTIKHMIEDDC D  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 169 HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 228
           HVE       DKD      +D LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123

Query: 229 VADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           VAD ++GKTPE++R  FNIKND+TP         N+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

Query: 289  348
           
Sbjct: 184  163

Query: 349  408
           
Sbjct: 244  163

Query: 409  468
           
Sbjct: 304  163

Query: 469  528
           
Sbjct: 364  163

Query: 529  568
           
Sbjct: 424  163

[Close]
BLAST of MU46613 vs. TAIR10
Match: AT2G25700.1 (AT2G25700.1 SKP1-like 3)

HSP 1 Score: 198.7 bits (504), Expect = 4.4e-51
Identity = 100/160 (62.50%), Postives = 117/160 (73.12%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           + K I+L+SSDGE+F+V+E VAVESQTIKHMIEDDCVD  IPLPNVT AIL+KV+EYCK 
Sbjct: 4   TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63

Query: 169 HVET-----DDKD--SKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQT 228
           HVE       DKD      +  LKTWD +FVKVD  TLFDL+ AANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123

Query: 229 VADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           VAD ++GKTP ++R+ FNIKND+TP         N+WAFE
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

Query: 289  348
           
Sbjct: 184  163

Query: 349  408
           
Sbjct: 244  163

Query: 409  468
           
Sbjct: 304  163

Query: 469  528
           
Sbjct: 364  163

Query: 529  568
           
Sbjct: 424  163

[Close]
BLAST of MU46613 vs. TAIR10
Match: AT4G34210.1 (AT4G34210.1 SKP1-like 11)

HSP 1 Score: 197.6 bits (501), Expect = 9.7e-51
Identity = 98/153 (64.05%), Postives = 117/153 (76.47%), Query Frame = 1 

Query: 109 SSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYCKM 168
           SSK IVL SSDG++F+V+E VA++SQTI HM+EDDCV   IPL NV S IL KV+EYCK 
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 169 HVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKG 228
           H    D+ + + ++ L  WD +F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 62  HHV--DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKG 121

Query: 229 KTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 288
           KTPEEIR TFNI+NDFTP         NQWAFE
Sbjct: 122 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

Query: 289  348
           
Sbjct: 182  152

Query: 349  408
           
Sbjct: 242  152

Query: 409  468
           
Sbjct: 302  152

Query: 469  528
           
Sbjct: 362  152

Query: 529  568
           
Sbjct: 422  152

[Close]
BLAST of MU46613 vs. NCBI nr
Match: gi|659094228|ref|XP_008447950.1| (PREDICTED: SKP1-like protein 1B [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 3.5e-74
Identity = 146/155 (94.19%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60

Query: 163 KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 222
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 223 KGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           KGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

Query: 283  342
           
Sbjct: 181  155

Query: 343  402
           
Sbjct: 241  155

Query: 403  462
           
Sbjct: 301  155

Query: 463  522
           
Sbjct: 361  155

Query: 523  568
           
Sbjct: 421  155

[Close]
BLAST of MU46613 vs. NCBI nr
Match: gi|449454215|ref|XP_004144851.1| (PREDICTED: SKP1-like protein 1B [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-73
Identity = 144/155 (92.90%), Postives = 145/155 (93.55%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDC DTVIPLPNVTSAILSKV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 163 KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 222
           KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 223 KGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           KGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

Query: 283  342
           
Sbjct: 181  155

Query: 343  402
           
Sbjct: 241  155

Query: 403  462
           
Sbjct: 301  155

Query: 463  522
           
Sbjct: 361  155

Query: 523  568
           
Sbjct: 421  155

[Close]
BLAST of MU46613 vs. NCBI nr
Match: gi|950655873|gb|ALN39177.1| (WSKP1 protein [Citrus reticulata])

HSP 1 Score: 246.5 bits (628), Expect = 5.2e-62
Identity = 124/158 (78.48%), Postives = 134/158 (84.81%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSS KKI L+SSDGETF+V+E VA+ES+TIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESRTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 163 KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 222
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA
Sbjct: 61  KKHVEARSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 120

Query: 223 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           DMIKGKTPEEIRKTFNIKNDF+P         NQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

Query: 283  342
           
Sbjct: 181  158

Query: 343  402
           
Sbjct: 241  158

Query: 403  462
           
Sbjct: 301  158

Query: 463  522
           
Sbjct: 361  158

Query: 523  568
           
Sbjct: 421  158

[Close]
BLAST of MU46613 vs. NCBI nr
Match: gi|567859864|ref|XP_006422586.1| (hypothetical protein CICLE_v10029465mg [Citrus clementina])

HSP 1 Score: 246.5 bits (628), Expect = 5.2e-62
Identity = 124/158 (78.48%), Postives = 133/158 (84.18%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MSS KKI L+SSDGETF+V+E VA+ESQTIKHM+EDDC DTVIPLPNVTS ILSKV+EYC
Sbjct: 1   MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60

Query: 163 KMHVET---DDKDSKVIDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVA 222
           K HVE    D KD K  +D LKTWDA+FVKVDQNTLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 223 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           DMIKGKTPEEIRKTFNIKNDF+P         NQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158

Query: 283  342
           
Sbjct: 181  158

Query: 343  402
           
Sbjct: 241  158

Query: 403  462
           
Sbjct: 301  158

Query: 463  522
           
Sbjct: 361  158

Query: 523  568
           
Sbjct: 421  158

[Close]
BLAST of MU46613 vs. NCBI nr
Match: gi|255539022|ref|XP_002510576.1| (PREDICTED: SKP1-like protein 1B [Ricinus communis])

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-61
Identity = 124/157 (78.98%), Postives = 132/157 (84.08%), Query Frame = 1 

Query: 103 MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 162
           MS+S+KI L+SSDGETF+VDE VA+ESQTIKHMIEDDC D  IPLPNVTS ILSKV+EYC
Sbjct: 1   MSTSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 163 KMHVETDDKDSKV--IDDTLKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVAD 222
           K HVET   D +   +DD LKTWDAEFVKVDQ TLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 223 MIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 282
           MIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

Query: 283  342
           
Sbjct: 181  157

Query: 343  402
           
Sbjct: 241  157

Query: 403  462
           
Sbjct: 301  157

Query: 463  522
           
Sbjct: 361  157

Query: 523  568
           
Sbjct: 421  157

The following BLAST results are available for this feature:
BLAST of MU46613 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKP1B_ARATH5.3e-5967.84SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1[more]
SKP1A_ARATH1.7e-5769.18SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1[more]
ASK4_ARATH1.8e-5163.75SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1[more]
ASK3_ARATH7.7e-5062.50SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1[more]
ASK11_ARATH1.7e-4964.05SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1[more]
BLAST of MU46613 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4P4_CUCSA1.1e-7492.90Uncharacterized protein OS=Cucumis sativus GN=Csa_7G012950 PE=3 SV=1[more]
V4SFP4_9ROSI4.3e-6378.48Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029465mg PE=3 SV=1[more]
A0A067FL58_CITSI4.3e-6378.48Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031498mg PE=3 SV=1[more]
A0A0S2C4U1_CITRE4.3e-6378.48WSKP1 protein OS=Citrus reticulata GN=WSKP1 PE=2 SV=1[more]
B9R8D3_RICCO2.8e-6278.98Skp1, putative OS=Ricinus communis GN=RCOM_1598810 PE=3 SV=1[more]
BLAST of MU46613 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42190.13.0e-6067.84 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein[more]
AT1G75950.19.7e-5969.18 S phase kinase-associated protein 1[more]
AT1G20140.11.0e-5263.75 SKP1-like 4[more]
AT2G25700.14.4e-5162.50 SKP1-like 3[more]
AT4G34210.19.7e-5164.05 SKP1-like 11[more]
BLAST of MU46613 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094228|ref|XP_008447950.1|3.5e-7494.19PREDICTED: SKP1-like protein 1B [Cucumis melo][more]
gi|449454215|ref|XP_004144851.1|1.3e-7392.90PREDICTED: SKP1-like protein 1B [Cucumis sativus][more]
gi|950655873|gb|ALN39177.1|5.2e-6278.48WSKP1 protein [Citrus reticulata][more]
gi|567859864|ref|XP_006422586.1|5.2e-6278.48hypothetical protein CICLE_v10029465mg [Citrus clementina][more]
gi|255539022|ref|XP_002510576.1|3.4e-6178.98PREDICTED: SKP1-like protein 1B [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR011333SKP1/BTB/POZ_sf
IPR016072Skp1_comp_dimer
IPR016073Skp1_comp_POZ
IPR016897SKP1
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C013349MELO3C013349gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D05A1115D05A11EST
46D25D0646D25D06EST
FA1YG19FM1FA1YG19FM1EST
GA35YO23FM1GA35YO23FM1EST
PH11H9PH11H9EST
PH19C6PH19C6EST
PH1G5PH1G5EST
PH20D9PH20D9EST
PH3C12PH3C12EST
PS35E06PS35E06EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 4..105
score: 5.6
IPR011333SKP1/BTB/POZ domainunknownSSF54695POZ domaincoord: 6..67
score: 9.42
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 106..153
score: 7.8
IPR016072SKP1 component, dimerisationunknownSSF81382Skp1 dimerisation domain-likecoord: 78..153
score: 7.59
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 5..64
score: 2.0
IPR016897S-phase kinase-associated protein 1PIRPIRSF028729SCF_Skpcoord: 1..155
score: 2.2
NoneNo IPR availableGENE3DG3DSA:3.30.710.10coord: 2..155
score: 3.7
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 1..155
score: 1.2