MELO3C012252.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C012252.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRibulose bisphosphate carboxylase small chain
Locationchr10 : 1692517 .. 1693901 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTGATAGAGATAAGGGTAATGGGTTGTTGCCACGTGTCAAAAGGAAATGGTCAGAGGAAGTGATAAGGTTTGAGATCCCAACTATGTGATCTTAAATTCAAGTTTTTTACCAACTAAATTTACAACCACTAAATTGGGTTGTGAATGGATAAAATGAGGATAGTAAAGAGCTTATAAATACACTACCATTTCACAGTGCAATGCCTCTCAGACTCAACAGCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCGGGAAAAAAAAAAAAAGAGGCATCAAATGGCTTCATCCATTCTCTCATCCGCCGCTGTTGCCTCTGTCAACAGTGCTTCCCCTGCTCAAGCTAGCATGGTGGCACCATTCACTGGCCTCAAATCCGCCGCTGCTTTCCCCGTCACTCGCAAGAACAACGACATCACCACTTTGGCTAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTATCAAATTCAATTTCTTTATTAATTAATTATATATTTGTTTGAGTTGATGAATAATTAGTTCTTCTTTTTTTTTTTCCTTGAAATTTAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTTTCTTACCTTCCTGATATGAGTAACGAGCAATTGGGAAAGGAAGTTGACTACCTTCTCAGGAAGGGATGGATTCCCTGCATTGAATTCGACATTCACGTATGGTTTTTTAATTTAATGGGATTGAATACTTAAATTAATTAGTGTTTGCGAGATTACTTAGTGTTTTTTTTTTCTTCTTCTTAATTTTGGCAGAGTGGATTCGTTTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGCTGCCCATGTTTGGCTGCACCGATTCATCTCAGGTGGTTAATGAGATTGAGGAGGCCAAGAAGGAATACCCCGACGCATACATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTGCAGTGCATCAGTTTCATCGCCTACAAGCCCCCAAGATTCTACACATCTCCTTAAATTCCATATGCTGCGGCTTTCTTGAGGCGAATTTCAACCATTTGCCTTTTTTAAAGCTTCATCACTTGGGTGGTTTCAACCAAATTTCCCTCCTTTAATTTTTTTTCTTTACTCTTTTTTTCCTATTTTTCCATTTTACGTTTTGGTTTGTCTGTTTAATCCCACTATGTTTATTTCCCCGACTTTCCAATTCGAATTGGAATAAATGATGCTTTGATTTGTTCTTGAATTATCCTATCAATCAATCGCTCCTATTTGCATCTTTCCTTGTGAAAATTCAATCTATTTCGCTATGAATGTTCAATTGGGGTTTGTGTTTGTGTTTGTGTGATGGATATT

mRNA sequence

CGTTGATAGAGATAAGGGTAATGGGTTGTTGCCACGTGTCAAAAGGAAATGGTCAGAGGAAGTGATAAGGTTTGAGATCCCAACTATGTGATCTTAAATTCAAGTTTTTTACCAACTAAATTTACAACCACTAAATTGGGTTGTGAATGGATAAAATGAGGATAGTAAAGAGCTTATAAATACACTACCATTTCACAGTGCAATGCCTCTCAGACTCAACAGCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCGGGAAAAAAAAAAAAAGAGGCATCAAATGGCTTCATCCATTCTCTCATCCGCCGCTGTTGCCTCTGTCAACAGTGCTTCCCCTGCTCAAGCTAGCATGGTGGCACCATTCACTGGCCTCAAATCCGCCGCTGCTTTCCCCGTCACTCGCAAGAACAACGACATCACCACTTTGGCTAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTTTCTTACCTTCCTGATATGAGTAACGAGCAATTGGGAAAGGAAGTTGACTACCTTCTCAGGAAGGGATGGATTCCCTGCATTGAATTCGACATTCACAGTGGATTCGTTTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGCTGCCCATGTTTGGCTGCACCGATTCATCTCAGGTGGTTAATGAGATTGAGGAGGCCAAGAAGGAATACCCCGACGCATACATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTGCAGTGCATCAGTTTCATCGCCTACAAGCCCCCAAGATTCTACACATCTCCTTAAATTCCATATGCTGCGGCTTTCTTGAGGCGAATTTCAACCATTTGCCTTTTTTAAAGCTTCATCACTTGGGTGGTTTCAACCAAATTTCCCTCCTTTAATTTTTTTTCTTTACTCTTTTTTTCCTATTTTTCCATTTTACGTTTTGGTTTGTCTGTTTAATCCCACTATGTTTATTTCCCCGACTTTCCAATTCGAATTGGAATAAATGATGCTTTGATTTGTTCTTGAATTATCCTATCAATCAATCGCTCCTATTTGCATCTTTCCTTGTGAAAATTCAATCTATTTCGCTATGAATGTTCAATTGGGGTTTGTGTTTGTGTTTGTGTGATGGATATT

Coding sequence (CDS)

ATGGCTTCATCCATTCTCTCATCCGCCGCTGTTGCCTCTGTCAACAGTGCTTCCCCTGCTCAAGCTAGCATGGTGGCACCATTCACTGGCCTCAAATCCGCCGCTGCTTTCCCCGTCACTCGCAAGAACAACGACATCACCACTTTGGCTAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTTTCTTACCTTCCTGATATGAGTAACGAGCAATTGGGAAAGGAAGTTGACTACCTTCTCAGGAAGGGATGGATTCCCTGCATTGAATTCGACATTCACAGTGGATTCGTTTACCGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGCTGCCCATGTTTGGCTGCACCGATTCATCTCAGGTGGTTAATGAGATTGAGGAGGCCAAGAAGGAATACCCCGACGCATACATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTGCAGTGCATCAGTTTCATCGCCTACAAGCCCCCAAGATTCTACACATCTCCTTAA

Protein sequence

MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPRFYTSP
Homology
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BLAST of MELO3C012252.2 vs. NCBI nr
Match: WP_082918361.1 (hypothetical protein [Pseudoalteromonas sp. MQS005] >XP_008446602.1 PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 6.3e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYTSP 186
           FYTSP
Sbjct: 181 FYTSP 185

[Close]
BLAST of MELO3C012252.2 vs. NCBI nr
Match: XP_004135094.1 (PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis sativus] >KGN52085.1 hypothetical protein Csa_5G609710 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 4.1e-94
Identity = 169/185 (91.35%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 RFYTS 185
           RFY+S
Sbjct: 181 RFYSS 185

[Close]
BLAST of MELO3C012252.2 vs. NCBI nr
Match: CCF55356.1 (ribulose-1,5-bisphosphate carboxylase small subunit [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 1.2e-93
Identity = 168/185 (90.81%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSA VASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAVVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 RFYTS 185
           RFY+S
Sbjct: 181 RFYSS 185

[Close]
BLAST of MELO3C012252.2 vs. NCBI nr
Match: WP_082711130.1 (MULTISPECIES: hypothetical protein [Bacteria])

HSP 1 Score: 348.2 bits (892), Expect = 1.7e-92
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EFD+H GFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEFDVHDGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+
Sbjct: 121 DGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPK 180

Query: 181 FYTS 185
           FY+S
Sbjct: 181 FYSS 184

[Close]
BLAST of MELO3C012252.2 vs. NCBI nr
Match: P08474.1 (RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor >AAA33131.1 ribulose bisphosphate carboxylase/oxygenase precursor peptide [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 2.3e-89
Identity = 162/179 (90.50%), Postives = 171/179 (95.53%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASN G+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPG+
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGF 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKP 179
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179

[Close]
BLAST of MELO3C012252.2 vs. TAIR10
Match: AT5G38430.1 (Ribulose bisphosphate carboxylase (small chain) family protein)

HSP 1 Score: 293.1 bits (749), Expect = 1.2e-79
Identity = 137/182 (75.27%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRK-NNDITTLASNGGRVQCM 60
           MASS+LSSAAV +    SPAQA+MVAPFTGLKS+A+FPVTRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPD+++ +L KEVDYLLR  WIPC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLP+FGCTDS+QV+ E+EE KKEYP A+IR+IGFDN RQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 RF 182
            F
Sbjct: 181 SF 178

[Close]
BLAST of MELO3C012252.2 vs. TAIR10
Match: AT5G38420.1 (Ribulose bisphosphate carboxylase (small chain) family protein)

HSP 1 Score: 291.2 bits (744), Expect = 4.5e-79
Identity = 136/182 (74.73%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRK-NNDITTLASNGGRVQCM 60
           MASS+ SS AV +    SPAQA+MVAPFTGLKS+A+FPVTRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPD+S+ +L KEVDYLLR  WIPC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLP+FGCTDS+QV+ E+EE KKEYP A+IR+IGFDN RQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 RF 182
            F
Sbjct: 181 SF 178

[Close]
BLAST of MELO3C012252.2 vs. TAIR10
Match: AT1G67090.1 (ribulose bisphosphate carboxylase small chain 1A)

HSP 1 Score: 289.7 bits (740), Expect = 1.3e-78
Identity = 134/182 (73.63%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRK-NNDITTLASNGGRVQCM 60
           MASS+LSSA +     ASPAQA+MVAPF GLKS+AAFP TRK NNDIT++ SNGGRV CM
Sbjct: 1   MASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           +VWPP+G KKFETLSYLPD+++ +L KEVDYL+R  WIPC+EF++  GFVYRE+  SPGY
Sbjct: 61  QVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLP+FGCTDS+QV+ E+EE KKEYP+A+IR+IGFDN RQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 RF 182
            F
Sbjct: 181 SF 178

[Close]
BLAST of MELO3C012252.2 vs. TAIR10
Match: AT5G38410.3 (Ribulose bisphosphate carboxylase (small chain) family protein)

HSP 1 Score: 288.5 bits (737), Expect = 2.9e-78
Identity = 139/187 (74.33%), Postives = 160/187 (85.56%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRK-NNDITTLASNGGRVQCM 60
           MASS+LSSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRK N DIT++ASNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIH-----SGFVYRENH 120
           KVWPP+G KKFETLSYLPD+S+ +L KEVDYLLR  WIPC+EF++       GFVYRE+ 
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHG 120

Query: 121 RSPGYYDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFI 180
            +PGYYDGRYWTMWKLP+FGCTDS+QV+ E+EE KKEYP A+IR+IGFDN RQVQCISFI
Sbjct: 121 NTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 180

Query: 181 AYKPPRF 182
           AYKPP F
Sbjct: 181 AYKPPSF 183

[Close]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match: sp|P08474|RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus OX=3659 GN=RBCS PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 7.6e-92
Identity = 162/179 (90.50%), Postives = 171/179 (95.53%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASN G+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPG+
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGF 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKP 179
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179

[Close]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match: sp|P24007|RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia OX=3767 GN=RBCS PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.9e-82
Identity = 142/183 (77.60%), Postives = 166/183 (90.71%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNS--ASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQC 60
           MASS++SS  VA+V++   +PAQA MVAPF GLKS++AFPVTRK+NDIT++ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60

Query: 61  MKVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPG 120
           M+VWPPLGLKKFETLSYLP +S+E L KEVDYLLRK W+PC+EF++ +GFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPG 120

Query: 121 YYDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKP 180
           YYDGRYWTMWKLPMFGCTDSSQV+ E+EEAKK YP ++IR+IGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 181 PRF 182
             F
Sbjct: 181 AGF 183

[Close]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match: sp|Q02980|RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. OX=3751 GN=RBCS PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.3e-82
Identity = 142/183 (77.60%), Postives = 164/183 (89.62%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNS--ASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQC 60
           MASS++SS  VA+V++   +PAQA MVAPFTGLKS++A PVTRK+NDIT++ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60

Query: 61  MKVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPG 120
           M+VWPPLGLKKFETLSYLP +S E L KEVDYLLRK W+PC+EF++  GFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120

Query: 121 YYDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKP 180
           YYDGRYWTMWKLPMFGCTDSSQV+ E+EEAKK YP ++IR+IGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 181 PRF 182
             F
Sbjct: 181 AGF 183

[Close]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match: sp|P10798|RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCS-3B PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 7.3e-79
Identity = 139/182 (76.37%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRK-NNDITTLASNGGRVQCM 60
           MASS+LSSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRK N DIT++ASNGGRV CM
Sbjct: 1   MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPP+G KKFETLSYLPD+S+ +L KEVDYLLR  WIPC+EF++  GFVYRE+  +PGY
Sbjct: 61  KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLP+FGCTDS+QV+ E+EE KKEYP A+IR+IGFDN RQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178

Query: 181 RF 182
            F
Sbjct: 181 SF 178

[Close]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match: sp|P16032|RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=RBCS-1 PE=2 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-78
Identity = 139/181 (76.80%), Postives = 159/181 (87.85%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASS++SSAAVA+VN  +PAQASMVAPF GLKS AAFPVT+KNNDIT++A+NGGRVQCM+
Sbjct: 1   MASSMVSSAAVATVN-RTPAQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQ 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLG KKFETLSYLP +S E L KEV YLL  GW+PC+EF+   GFVYRE+  +PGYY
Sbjct: 61  VWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTD SQVV E+EEAKK YP+A+IR+IGFDNVRQVQCISFIAYKP  
Sbjct: 121 DGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKPAS 180

Query: 181 F 182
           +
Sbjct: 181 Y 180

[Close]
BLAST of MELO3C012252.2 vs. TrEMBL
Match: tr|A0A1S3BG44|A0A1S3BG44_CUCME (Ribulose bisphosphate carboxylase small chain OS=Cucumis melo OX=3656 GN=LOC103489286 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 4.2e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYTSP 186
           FYTSP
Sbjct: 181 FYTSP 185

[Close]
BLAST of MELO3C012252.2 vs. TrEMBL
Match: tr|A0A0A0KR46|A0A0A0KR46_CUCSA (Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus OX=3659 GN=Csa_5G609710 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.7e-94
Identity = 169/185 (91.35%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSAAVASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 RFYTS 185
           RFY+S
Sbjct: 181 RFYSS 185

[Close]
BLAST of MELO3C012252.2 vs. TrEMBL
Match: tr|H8WR56|H8WR56_CUCSA (Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus OX=3659 GN=ruBisCO PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 7.8e-94
Identity = 168/185 (90.81%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNN-DITTLASNGGRVQCM 60
           MASSILSSA VASVNSASPAQASMVAPFTGLKS+A FP+TRKNN DITTLASNGG+VQCM
Sbjct: 1   MASSILSSAVVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60

Query: 61  KVWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGY 120
           KVWPPLGL+KFETLSYLPDMSNEQL KE DYLLR GW+PC+EFDI SGFVYRENHRSPGY
Sbjct: 61  KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120

Query: 121 YDGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPP 180
           YDGRYWTMWKLPMFGCTDSSQV+ EIEEAKKEYPDA+IRVIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180

Query: 181 RFYTS 185
           RFY+S
Sbjct: 181 RFYSS 185

[Close]
BLAST of MELO3C012252.2 vs. TrEMBL
Match: tr|I7DCG5|I7DCG5_ARAEL (Ribulose bisphosphate carboxylase small chain OS=Aralia elata OX=82095 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-85
Identity = 149/183 (81.42%), Postives = 171/183 (93.44%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASS++SSA+VA+V+ A+PAQASMVAPFTGLKS AAFPVTRK NDIT+L SNGGRVQCMK
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLP ++NE+L KEVDYLLR GW+PC+EF++  G+VYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTDSSQV+NE+EE KKEYP+A+IR+IGFDNVRQVQCISFIA+KPP+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKPPQ 180

Query: 181 FYT 184
             T
Sbjct: 181 IST 183

[Close]
BLAST of MELO3C012252.2 vs. TrEMBL
Match: tr|A0A218XIM2|A0A218XIM2_PUNGR (Ribulose bisphosphate carboxylase small chain OS=Punica granatum OX=22663 GN=CDL15_Pgr027445 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.7e-85
Identity = 151/184 (82.07%), Postives = 169/184 (91.85%), Query Frame = 0 

Query: 1   MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
           MASS+LSSA V   N+ +PAQA++VAPFTGLKSA+AFPVTRKN DIT+LASNGGRVQCMK
Sbjct: 1   MASSMLSSAVVG--NAKTPAQATLVAPFTGLKSASAFPVTRKNADITSLASNGGRVQCMK 60

Query: 61  VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
           VWPPLGLKKFETLSYLP +S  QLG+EVDYLLR GW+PC+EFD+ SGFVYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPPLSEAQLGREVDYLLRMGWVPCLEFDVGSGFVYRENHRSPGYY 120

Query: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
           DGRYWTMWKLPMFGCTDSSQV+ E++EAKK YPDA+IR+IGFDNVRQVQCISFIAYKPPR
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKELQEAKKAYPDAFIRIIGFDNVRQVQCISFIAYKPPR 180

Query: 181 FYTS 185
           +  S
Sbjct: 181 YAQS 182

The following BLAST results are available for this feature:
BLAST of MELO3C012252.2 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_082918361.16.3e-103100.00hypothetical protein [Pseudoalteromonas sp. MQS005] >XP_008446602.1 PREDICTED: r... [more]
XP_004135094.14.1e-9491.35PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis... [more]
CCF55356.11.2e-9390.81ribulose-1,5-bisphosphate carboxylase small subunit [Cucumis sativus][more]
WP_082711130.11.7e-9287.50MULTISPECIES: hypothetical protein [Bacteria][more]
P08474.12.3e-8990.50RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Shor... [more]
BLAST of MELO3C012252.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38430.11.2e-7975.27Ribulose bisphosphate carboxylase (small chain) family protein[more]
AT5G38420.14.5e-7974.73Ribulose bisphosphate carboxylase (small chain) family protein[more]
AT1G67090.11.3e-7873.63ribulose bisphosphate carboxylase small chain 1A[more]
AT5G38410.32.9e-7874.33Ribulose bisphosphate carboxylase (small chain) family protein[more]
BLAST of MELO3C012252.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P08474|RBS_CUCSA7.6e-9290.50Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus ... [more]
sp|P24007|RBS_PYRPY1.9e-8277.60Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia ... [more]
sp|Q02980|RBS_MALSP9.3e-8277.60Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. OX=375... [more]
sp|P10798|RBS3B_ARATH7.3e-7976.37Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis t... [more]
sp|P16032|RBS1_MESCR1.6e-7876.80Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthem... [more]
BLAST of MELO3C012252.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BG44|A0A1S3BG44_CUCME4.2e-103100.00Ribulose bisphosphate carboxylase small chain OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0A0KR46|A0A0A0KR46_CUCSA2.7e-9491.35Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus OX=3659 GN=Csa_... [more]
tr|H8WR56|H8WR56_CUCSA7.8e-9490.81Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus OX=3659 GN=ruBi... [more]
tr|I7DCG5|I7DCG5_ARAEL1.3e-8581.42Ribulose bisphosphate carboxylase small chain OS=Aralia elata OX=82095 PE=2 SV=1[more]
tr|A0A218XIM2|A0A218XIM2_PUNGR8.7e-8582.07Ribulose bisphosphate carboxylase small chain OS=Punica granatum OX=22663 GN=CDL... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024680RuBisCO_ssu_N
IPR036385RuBisCO_ssu_sf
IPR000894RuBisCO_sc_dom
IPR024681RuBisCO_sc
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0009853 photorespiration
biological_process GO:0015979 photosynthesis
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009058 biosynthetic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012252.2.1MELO3C012252.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024681Ribulose bisphosphate carboxylase, small chainPRINTSPR00152RUBISCOSMALLcoord: 96..111
score: 55.04
coord: 118..147
score: 82.87
coord: 152..178
score: 83.31
coord: 21..38
score: 76.88
coord: 68..94
score: 71.29
coord: 47..65
score: 73.4
IPR000894Ribulose bisphosphate carboxylase small chain, domainSMARTSM00961RuBisCO_small_2_acoord: 69..178
e-value: 2.9E-40
score: 149.8
IPR000894Ribulose bisphosphate carboxylase small chain, domainPFAMPF00101RuBisCO_smallcoord: 70..178
e-value: 9.3E-41
score: 137.7
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilyGENE3DG3DSA:3.30.190.10coord: 59..184
e-value: 7.6E-62
score: 208.9
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilySUPERFAMILYSSF55239RuBisCO, small subunitcoord: 59..179
IPR024680Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminalPFAMPF12338RbcScoord: 2..44
e-value: 1.5E-22
score: 79.4
NoneNo IPR availablePANTHERPTHR31262:SF0RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDcoord: 1..179
NoneNo IPR availablePANTHERPTHR31262FAMILY NOT NAMEDcoord: 1..179
NoneNo IPR availableCDDcd03527RuBisCO_smallcoord: 68..178
e-value: 1.09462E-59
score: 182.842

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C012252.2Csa5G609710Cucumber (Chinese Long) v2cumedB359
MELO3C012252.2CSPI05G25310Wild cucumber (PI 183967)cpimedB363
MELO3C012252.2Cucsa.283540Cucumber (Gy14) v1cgymedB471
MELO3C012252.2CmaCh18G010180Cucurbita maxima (Rimu)cmamedB408
MELO3C012252.2CmaCh04G015060Cucurbita maxima (Rimu)cmamedB726
MELO3C012252.2CmoCh04G015760Cucurbita moschata (Rifu)cmomedB720
MELO3C012252.2CmoCh18G010270Cucurbita moschata (Rifu)cmomedB395
MELO3C012252.2Lsi04G002500Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C012252.2Cp4.1LG01g13630Cucurbita pepo (Zucchini)cpemedB423
MELO3C012252.2Cp4.1LG09g03060Cucurbita pepo (Zucchini)cpemedB028
MELO3C012252.2CsGy5G024760Cucumber (Gy14) v2cgybmedB318
MELO3C012252.2Cla020400Watermelon (97103) v1medwmB061
MELO3C012252.2ClCG05G022680Watermelon (Charleston Gray)medwcgB061
MELO3C012252.2Cla97C05G104530Watermelon (97103) v2medwmbB056
MELO3C012252.2Bhi07G001100Wax gourdmedwgoB071
MELO3C012252.2Carg21594Silver-seed gourdcarmedB1022
MELO3C012252.2Carg01843Silver-seed gourdcarmedB0846
MELO3C012252.2CsaV3_5G034360Cucumber (Chinese Long) v3cucmedB375
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C012252.2Silver-seed gourdcarmedB0604
MELO3C012252.2Cucumber (Chinese Long) v3cucmedB004
MELO3C012252.2Cucumber (Chinese Long) v3cucmedB006
MELO3C012252.2Watermelon (97103) v2medwmbB054
MELO3C012252.2Watermelon (97103) v2medwmbB059
MELO3C012252.2Wax gourdmedwgoB059
MELO3C012252.2Wax gourdmedwgoB069
MELO3C012252.2Cucumber (Gy14) v2cgybmedB006
MELO3C012252.2Cucurbita moschata (Rifu)cmomedB195
MELO3C012252.2Cucurbita maxima (Rimu)cmamedB206
MELO3C012252.2Cucumber (Gy14) v1cgymedB353
MELO3C012252.2Cucurbita maxima (Rimu)cmamedB090
MELO3C012252.2Cucurbita maxima (Rimu)cmamedB301
MELO3C012252.2Cucurbita maxima (Rimu)cmamedB733
MELO3C012252.2Cucurbita maxima (Rimu)cmamedB747
MELO3C012252.2Cucurbita moschata (Rifu)cmomedB082
MELO3C012252.2Cucurbita moschata (Rifu)cmomedB288
MELO3C012252.2Cucurbita moschata (Rifu)cmomedB728
MELO3C012252.2Cucurbita moschata (Rifu)cmomedB744
MELO3C012252.2Cucurbita pepo (Zucchini)cpemedB187
MELO3C012252.2Cucurbita pepo (Zucchini)cpemedB432
MELO3C012252.2Cucurbita pepo (Zucchini)cpemedB706
MELO3C012252.2Wild cucumber (PI 183967)cpimedB004
MELO3C012252.2Wild cucumber (PI 183967)cpimedB006
MELO3C012252.2Cucumber (Chinese Long) v2cumedB005
MELO3C012252.2Cucumber (Chinese Long) v2cumedB006
MELO3C012252.2Melon (DHL92) v3.6.1medmedB022
MELO3C012252.2Melon (DHL92) v3.6.1medmedB025
MELO3C012252.2Bottle gourd (USVL1VR-Ls)lsimedB177
MELO3C012252.2Bottle gourd (USVL1VR-Ls)lsimedB411
MELO3C012252.2Watermelon (Charleston Gray)medwcgB063
MELO3C012252.2Watermelon (97103) v1medwmB067
MELO3C012252.2Watermelon (97103) v1medwmB079