BLAST of Cp4.1LG01g13630 vs. Swiss-Prot
Match:
RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 3.3e-84
Identity = 149/179 (83.24%), Postives = 164/179 (91.62%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSAAVASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASN +V+CM
Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPG+
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGF 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 179
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
BLAST of Cp4.1LG01g13630 vs. Swiss-Prot
Match:
RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2)
HSP 1 Score: 299.3 bits (765), Expect = 2.9e-80
Identity = 142/181 (78.45%), Postives = 161/181 (88.95%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASS+VSSAAVA+VNR +PAQASMVAPF GLKS A FPVT+KNNDIT++A+NG RV+CM+
Sbjct: 1 MASSMVSSAAVATVNR-TPAQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQ 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPPLG KKFETLSYLP L+ E L+KE+ YLL +GWVPC+EFE GFVYRE+ +PGYY
Sbjct: 61 VWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPAS 180
DGRYWTMWKLPMFGCTDP+QV AE+EEAKK YP AFIR+IGFDNVRQVQCISFI YKPAS
Sbjct: 121 DGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKPAS 180
Query: 181 Y 182
Y
Sbjct: 181 Y 180
BLAST of Cp4.1LG01g13630 vs. Swiss-Prot
Match:
RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 2.4e-79
Identity = 141/183 (77.05%), Postives = 161/183 (87.98%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN--DITTLASNGSRVKC 60
MASSIVSSAAVA+ R++ AQASMVAPF GLKS A FPVT+KNN DIT+LASNG RV+C
Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRC 60
Query: 61 MKVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPG 120
M+VWPP+ +KK+ETLSYLPDL+ EQLLKE+ YLL++GWVPC+EFE E GFVYRENH+SPG
Sbjct: 61 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPG 120
Query: 121 YYDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 180
YYDGRYWTMWKLPMFGCTD QV AE++EAKK YP A+IR+IGFDNVRQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 180
Query: 181 ASY 182
Y
Sbjct: 181 EGY 181
BLAST of Cp4.1LG01g13630 vs. Swiss-Prot
Match:
RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1)
HSP 1 Score: 295.8 bits (756), Expect = 3.2e-79
Identity = 139/183 (75.96%), Postives = 159/183 (86.89%), Query Frame = 1
Query: 1 MASSIVSSAAVASVN--RASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKC 60
MASS++SS VA+V+ R +PAQA MVAPF GLKS++ FPVTRK+NDIT++ASNG RV+C
Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60
Query: 61 MKVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPG 120
M+VWPPLGLKKFETLSYLP L+ E L KE+ YLLR WVPC+EFELE GFVYRENHRSPG
Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPG 120
Query: 121 YYDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 180
YYDGRYWTMWKLPMFGCTD +QV E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
Query: 181 ASY 182
A +
Sbjct: 181 AGF 183
BLAST of Cp4.1LG01g13630 vs. Swiss-Prot
Match:
RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 2.1e-78
Identity = 138/183 (75.41%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 MASSIVSSAAVASVN--RASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKC 60
MASS++SS VA+V+ R +PAQA MVAPF GLKS++ PVTRK+NDIT++ASNG RV+C
Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60
Query: 61 MKVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPG 120
M+VWPPLGLKKFETLSYLP L+ E L KE+ YLLR WVPC+EFELE GFVYRENHRSPG
Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120
Query: 121 YYDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 180
YYDGRYWTMWKLPMFGCTD +QV E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
Query: 181 ASY 182
A +
Sbjct: 181 AGF 183
BLAST of Cp4.1LG01g13630 vs. TrEMBL
Match:
A0A0A0KR46_CUCSA (Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus GN=Csa_5G609710 PE=3 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 1.9e-83
Identity = 151/182 (82.97%), Postives = 166/182 (91.21%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSAAVASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASNG +V+CM
Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPGY
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180
Query: 181 SY 182
+
Sbjct: 181 RF 182
BLAST of Cp4.1LG01g13630 vs. TrEMBL
Match:
H8WR56_CUCSA (Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus GN=ruBisCO PE=2 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 5.6e-83
Identity = 150/182 (82.42%), Postives = 165/182 (90.66%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSA VASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASNG +V+CM
Sbjct: 1 MASSILSSAVVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPGY
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180
Query: 181 SY 182
+
Sbjct: 181 RF 182
BLAST of Cp4.1LG01g13630 vs. TrEMBL
Match:
I7DCG5_ARAEL (Ribulose bisphosphate carboxylase small chain OS=Aralia elata PE=2 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 9.6e-83
Identity = 147/178 (82.58%), Postives = 163/178 (91.57%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASS++SSA+VA+V+RA+PAQASMVAPF GLKSTA FPVTRK NDIT+L SNG RV+CMK
Sbjct: 1 MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPPLGLKKFETLSYLP LT E+L KE+ YLLRSGWVPC+EFELE G+VYRENHRSPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 179
DGRYWTMWKLPMFGCTD +QV E+EE KKEYPNAFIR+IGFDNVRQVQCISFI +KP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178
BLAST of Cp4.1LG01g13630 vs. TrEMBL
Match:
Q3LFQ4_PANGI (Ribulose bisphosphate carboxylase small chain OS=Panax ginseng PE=2 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 4.8e-82
Identity = 147/180 (81.67%), Postives = 161/180 (89.44%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASS++SSA VA+V+RA PAQASMVAPF GLKSTA FPVTRK NDIT+L SNG RV+CMK
Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPPLGLKKFETLSYLP LT EQL KE+ YLLRSGWVPC+EFELE GFVYRE+H SPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPAS 180
DGRYWTMWKLPMFGCTD +QV E+EE KKEYPNA+IR+IGFDNVRQVQCISFI +KP S
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKPPS 180
BLAST of Cp4.1LG01g13630 vs. TrEMBL
Match:
A0A059A414_EUCGR (Ribulose bisphosphate carboxylase small chain OS=Eucalyptus grandis GN=EUGRSUZ_K02223 PE=3 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 1.5e-80
Identity = 144/181 (79.56%), Postives = 161/181 (88.95%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASSIVSSAAVA+VNRASPAQASMVAPF GLKS + FPVTRK+ DIT+LASNG RV+CM+
Sbjct: 1 MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPP+G KKFETLSYLP L+ E+LLKEI YLLR WVPC+EFELEKGFVYR+NH+SPGYY
Sbjct: 61 VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPAS 180
DGRYWTMWKLPMFGCTDP QV E++EA K YPNAF+R+IGFDN RQVQCISFI YKP
Sbjct: 121 DGRYWTMWKLPMFGCTDPLQVLKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180
Query: 181 Y 182
+
Sbjct: 181 F 181
BLAST of Cp4.1LG01g13630 vs. TAIR10
Match:
AT5G38430.1 (AT5G38430.1 Ribulose bisphosphate carboxylase (small chain) family protein)
HSP 1 Score: 283.9 bits (725), Expect = 7.0e-77
Identity = 135/182 (74.18%), Postives = 154/182 (84.62%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRK-NNDITTLASNGSRVKCM 60
MASS++SSAAV + SPAQA+MVAPF GLKS+A FPVTRK NNDIT++ SNG RV CM
Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPP+G KKFETLSYLPDLT +L KE+ YLLR+ W+PC+EFELE GFVYRE+ +PGY
Sbjct: 61 KVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLP+FGCTD AQV E+EE KKEYP AFIR+IGFDN RQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178
Query: 181 SY 182
S+
Sbjct: 181 SF 178
BLAST of Cp4.1LG01g13630 vs. TAIR10
Match:
AT1G67090.1 (AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A)
HSP 1 Score: 281.6 bits (719), Expect = 3.5e-76
Identity = 133/182 (73.08%), Postives = 153/182 (84.07%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRK-NNDITTLASNGSRVKCM 60
MASS++SSA + ASPAQA+MVAPF GLKS+A FP TRK NNDIT++ SNG RV CM
Sbjct: 1 MASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
+VWPP+G KKFETLSYLPDLT +L KE+ YL+R+ W+PC+EFELE GFVYRE+ SPGY
Sbjct: 61 QVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLP+FGCTD AQV E+EE KKEYPNAFIR+IGFDN RQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 178
Query: 181 SY 182
S+
Sbjct: 181 SF 178
BLAST of Cp4.1LG01g13630 vs. TAIR10
Match:
AT5G38420.1 (AT5G38420.1 Ribulose bisphosphate carboxylase (small chain) family protein)
HSP 1 Score: 280.0 bits (715), Expect = 1.0e-75
Identity = 133/182 (73.08%), Postives = 152/182 (83.52%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRK-NNDITTLASNGSRVKCM 60
MASS+ SS AV + SPAQA+MVAPF GLKS+A FPVTRK NNDIT++ SNG RV CM
Sbjct: 1 MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPP+G KKFETLSYLPDL+ +L KE+ YLLR+ W+PC+EFELE GFVYRE+ +PGY
Sbjct: 61 KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLP+FGCTD AQV E+EE KKEYP AFIR+IGFDN RQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 178
Query: 181 SY 182
S+
Sbjct: 181 SF 178
BLAST of Cp4.1LG01g13630 vs. TAIR10
Match:
AT5G38410.3 (AT5G38410.3 Ribulose bisphosphate carboxylase (small chain) family protein)
HSP 1 Score: 275.4 bits (703), Expect = 2.5e-74
Identity = 134/187 (71.66%), Postives = 154/187 (82.35%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASS++SSAAV + SPAQA+MVAPF GLKS+A FPVTRK N DIT++ASNG RV CM
Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELE-----KGFVYRENH 120
KVWPP+G KKFETLSYLPDL+ +L KE+ YLLR+ W+PC+EFELE GFVYRE+
Sbjct: 61 KVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHG 120
Query: 121 RSPGYYDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFI 180
+PGYYDGRYWTMWKLP+FGCTD AQV E+EE KKEYP AFIR+IGFDN RQVQCISFI
Sbjct: 121 NTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 180
Query: 181 VYKPASY 182
YKP S+
Sbjct: 181 AYKPPSF 183
BLAST of Cp4.1LG01g13630 vs. NCBI nr
Match:
gi|659091543|ref|XP_008446602.1| (PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis melo])
HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 152/181 (83.98%), Postives = 164/181 (90.61%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASSI+SSAAVASVN ASPAQASMVAPF GLKS A FPVTRKNNDITTLASNG RV+CMK
Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMK 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPPLGLKKFETLSYLPD++ EQL KE+ YLLR GW+PCIEF++ GFVYRENHRSPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPAS 180
DGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+A+IRVIGFDNVRQVQCISFI YKP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPR 180
Query: 181 Y 182
+
Sbjct: 181 F 181
BLAST of Cp4.1LG01g13630 vs. NCBI nr
Match:
gi|449434620|ref|XP_004135094.1| (PREDICTED: ribulose bisphosphate carboxylase small chain, chloroplastic [Cucumis sativus])
HSP 1 Score: 316.6 bits (810), Expect = 2.8e-83
Identity = 151/182 (82.97%), Postives = 166/182 (91.21%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSAAVASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASNG +V+CM
Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPGY
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180
Query: 181 SY 182
+
Sbjct: 181 RF 182
BLAST of Cp4.1LG01g13630 vs. NCBI nr
Match:
gi|379131260|emb|CCF55356.1| (ribulose-1,5-bisphosphate carboxylase small subunit [Cucumis sativus])
HSP 1 Score: 315.1 bits (806), Expect = 8.1e-83
Identity = 150/182 (82.42%), Postives = 165/182 (90.66%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSA VASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASNG +V+CM
Sbjct: 1 MASSILSSAVVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPGY
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGY 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPA 180
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPP 180
Query: 181 SY 182
+
Sbjct: 181 RF 182
BLAST of Cp4.1LG01g13630 vs. NCBI nr
Match:
gi|397789258|gb|AFO67218.1| (putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Aralia elata])
HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82
Identity = 147/178 (82.58%), Postives = 163/178 (91.57%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMK 60
MASS++SSA+VA+V+RA+PAQASMVAPF GLKSTA FPVTRK NDIT+L SNG RV+CMK
Sbjct: 1 MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 61 VWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYY 120
VWPPLGLKKFETLSYLP LT E+L KE+ YLLRSGWVPC+EFELE G+VYRENHRSPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120
Query: 121 DGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 179
DGRYWTMWKLPMFGCTD +QV E+EE KKEYPNAFIR+IGFDNVRQVQCISFI +KP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178
BLAST of Cp4.1LG01g13630 vs. NCBI nr
Match:
gi|132138|sp|P08474.1|RBS_CUCSA (RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor [Cucumis sativus])
HSP 1 Score: 312.4 bits (799), Expect = 5.2e-82
Identity = 149/179 (83.24%), Postives = 164/179 (91.62%), Query Frame = 1
Query: 1 MASSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNN-DITTLASNGSRVKCM 60
MASSI+SSAAVASVN ASPAQASMVAPF GLKS+AGFP+TRKNN DITTLASN +V+CM
Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60
Query: 61 KVWPPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGY 120
KVWPPLGL+KFETLSYLPD++ EQL KE YLLR+GWVPC+EF++ GFVYRENHRSPG+
Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGF 120
Query: 121 YDGRYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKP 179
YDGRYWTMWKLPMFGCTD +QV EIEEAKKEYP+AFIRVIGFDNVRQVQCISFI YKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RBS_CUCSA | 3.3e-84 | 83.24 | Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus ... | [more] |
RBS1_MESCR | 2.9e-80 | 78.45 | Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthem... | [more] |
RBS3_SOLTU | 2.4e-79 | 77.05 | Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tubero... | [more] |
RBS_PYRPY | 3.2e-79 | 75.96 | Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia ... | [more] |
RBS_MALSP | 2.1e-78 | 75.41 | Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBC... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KR46_CUCSA | 1.9e-83 | 82.97 | Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus GN=Csa_5G609710... | [more] |
H8WR56_CUCSA | 5.6e-83 | 82.42 | Ribulose bisphosphate carboxylase small chain OS=Cucumis sativus GN=ruBisCO PE=2... | [more] |
I7DCG5_ARAEL | 9.6e-83 | 82.58 | Ribulose bisphosphate carboxylase small chain OS=Aralia elata PE=2 SV=1 | [more] |
Q3LFQ4_PANGI | 4.8e-82 | 81.67 | Ribulose bisphosphate carboxylase small chain OS=Panax ginseng PE=2 SV=1 | [more] |
A0A059A414_EUCGR | 1.5e-80 | 79.56 | Ribulose bisphosphate carboxylase small chain OS=Eucalyptus grandis GN=EUGRSUZ_K... | [more] |
Match Name | E-value | Identity | Description | |
AT5G38430.1 | 7.0e-77 | 74.18 | Ribulose bisphosphate carboxylase (small chain) family protein | [more] |
AT1G67090.1 | 3.5e-76 | 73.08 | ribulose bisphosphate carboxylase small chain 1A | [more] |
AT5G38420.1 | 1.0e-75 | 73.08 | Ribulose bisphosphate carboxylase (small chain) family protein | [more] |
AT5G38410.3 | 2.5e-74 | 71.66 | Ribulose bisphosphate carboxylase (small chain) family protein | [more] |