MELO3C011654.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C011654.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING zinc finger protein-like
Locationchr03 : 12274709 .. 12277060 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAAACCCTTTCCCTTTCCCAATTTCAAAATAAAAACAAAAACTAACTCAACCAAAAAAAATATCCCGATTCAACCTTCTCTTCTTCAAATCCTCCCAATACACATCCACTGGGATTTGAAGGGTAAGATCGCCTCATCGTTGTTGAATATATATTTCTCTCTTGCGTTCTGTTATTTGCTCATTCTGATTGCTTTTGATTGATTCTGTGTCTACAATGTTCTTCCTCGATTTTCATCGTTGTGCATTTCCGCCCACTTCTGTTTGTTTGTACTTCGGGAATTGTTTGTTTTTATGCCATCTATTTCTTTTTCCGTCGTTTGTTCTTGTGTGTTCTGCCTTTTTTATGGGTTGTGATTTAATTGTTTTGCCGCGACTTGTACAATTAATGGGGTTTGTCTCTAATGTAGTGTTAATCTTTGATGTGATTTGGGAAACTGGTCTAGATTAGGTTTATATCTGGCTGACAGAACAATCCATTATCTCTGGGCAATTTTCTTATTCCAACTATGGTGTATCTAATGTTTTTAATTCTTTTCAAGTTACTCATCTCTTTTGTGGACAGGTAGAGAAATTATTGCACGTCCCTTAAGAATGTTCTAAAAACATCGTAGAGTTCTATTTCTGTTTATGTTTACTCGTGTAAATTAAAAAATAGATGTTCGATCTTTTGCAAACCTTGCTTCCATAGCACTGCAACTTAGTTTAGTTAGGGATTGTTCAATTATCTTATTTAAGTAGTTAGACATCATTCGTTATCATGTTGAATTCAATCCAATCTTCTCTAGTGTTATATATCTTTTGATCTCGAATTGATGGTACTTCTGATGTTTATAACTTTGTATAGTAGTGTTGTCTGGTAGGATCCTTGTTGATTTAGTTGGTTTTTTTTTTTTCCTTTTTCTCTTTTCTTTCAGGTTCATCTCTTATATAAAGCATAATTAAGTCATTGAGCATAAAGTTAATCACTAATAAGCCTTGGTCAAATGCAACTATAGCTACTATTGCAGTTGGTCATTTCTGACCAGTAGTTGCCTGTTGTTAGAATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAAACATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCCGCTAATCTTTCCAGTGAGCGGTTCTTCATCCAGGGTTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTGGATTCACAAGGACCAAACAGTGCCAATAGCCATTTCCATAACTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCGTTGGTAATCATCTTCCTCTTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTCGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCGAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAAGGTGTATACTATAAGGCAATGTGAATTGTGACTAGTAGAGACCATCACTTCAGGACTTCTACTTCTACGAAGCCAGTCGCATCTTTCAGGAAAGTTGACTTCATATTTTAGCTTGTTGATATATTAGCTTCCCAATTTGCCGACATCTCAGCTGGATCGTTCATATTCAACATCAAACTCGAGTGGACGATGATTGCATTCCCAGGTAAAAAATAGGTCTCGTTTTCGGTTTAGTGTCCTACTTTTTTTTTTTTTTTTTTTTTTTCACTAAAAATCTTCTTTAGTAAGGAAGTTATTTGTGGTGTCATCTTGATGCTTCTTTGTGCGATATTAACTGTCACCGTGTACTAGATCTGGAAATTAGATATTGTATGGACAAAGCTATAAGAAGCTCAAGTCCTTGCTTGTATAGAGGAATGGACCAATTTATATGCCTGTATCCACCCCACCCCCAAAAAATTTTTAAAAAAAATAAAAAATATTAAGAAGGTGTAGTTTTAGTTTGGT

mRNA sequence

CTCAAAACCCTTTCCCTTTCCCAATTTCAAAATAAAAACAAAAACTAACTCAACCAAAAAAAATATCCCGATTCAACCTTCTCTTCTTCAAATCCTCCCAATACACATCCACTGGGATTTGAAGGGTTCATCTCTTATATAAAGCATAATTAAGTCATTGAGCATAAAGTTAATCACTAATAAGCCTTGGTCAAATGCAACTATAGCTACTATTGCAGTTGGTCATTTCTGACCAGTAGTTGCCTGTTGTTAGAATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAAACATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCCGCTAATCTTTCCAGTGAGCGGTTCTTCATCCAGGGTTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTGGATTCACAAGGACCAAACAGTGCCAATAGCCATTTCCATAACTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCGTTGGTAATCATCTTCCTCTTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTCGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCGAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAAGGTGTATACTATAAGGCAATGTGAATTGTGACTAGTAGAGACCATCACTTCAGGACTTCTACTTCTACGAAGCCAGTCGCATCTTTCAGGAAAGTTGACTTCATATTTTAGCTTGTTGATATATTAGCTTCCCAATTTGCCGACATCTCAGCTGGATCGTTCATATTCAACATCAAACTCGAGTGGACGATGATTGCATTCCCAGGTAAAAAATAGGTCTCGTTTTCGGTTTAGTGTCCTACTTTTTTTTTTTTTTTTTTTTTTTCACTAAAAATCTTCTTTAGTAAGGAAGTTATTTGTGGTGTCATCTTGATGCTTCTTTGTGCGATATTAACTGTCACCGTGTACTAGATCTGGAAATTAGATATTGTATGGACAAAGCTATAAGAAGCTCAAGTCCTTGCTTGTATAGAGGAATGGACCAATTTATATGCCTGTATCCACCCCACCCCCAAAAAATTTTTAAAAAAAATAAAAAATATTAAGAAGGTGTAGTTTTAGTTTGGT

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAAACATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCCGCTAATCTTTCCAGTGAGCGGTTCTTCATCCAGGGTTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTGGATTCACAAGGACCAAACAGTGCCAATAGCCATTTCCATAACTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCGTTGGTAATCATCTTCCTCTTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTCGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCGAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

Protein sequence

MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSANSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT
BLAST of MELO3C011654.2 vs. NCBI nr
Match: XP_008445733.1 (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 5.0e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of MELO3C011654.2 vs. NCBI nr
Match: XP_004140883.1 (PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.1 PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_011656553.1 PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >KGN46000.1 hypothetical protein Csa_6G042350 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of MELO3C011654.2 vs. NCBI nr
Match: XP_022949151.1 (uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949154.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949155.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949156.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949157.1 uncharacterized protein LOC111452589 [Cucurbita moschata])

HSP 1 Score: 476.9 bits (1226), Expect = 4.6e-131
Identity = 240/265 (90.57%), Postives = 252/265 (95.09%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVEN+N ERVKS S FSGD L+FPVSG +SR NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of MELO3C011654.2 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.3 bits (1222), Expect = 1.3e-130
Identity = 239/265 (90.19%), Postives = 251/265 (94.72%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVEN+N ERVKS S FSGD L+FPVSG +SR NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of MELO3C011654.2 vs. NCBI nr
Match: XP_022998137.1 (uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998139.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998140.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998141.1 uncharacterized protein LOC111492874 [Cucurbita maxima])

HSP 1 Score: 471.9 bits (1213), Expect = 1.5e-129
Identity = 238/265 (89.81%), Postives = 250/265 (94.34%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVEN+N ERVKS S FSGD L+FPVSG +SR NQV H+NLRRGHHVRQLD Q  N+A
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDLQRSNNA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

BLAST of MELO3C011654.2 vs. TAIR10
Match: AT3G29270.1 (RING/U-box superfamily protein)

HSP 1 Score: 306.2 bits (783), Expect = 1.9e-83
Identity = 164/266 (61.65%), Postives = 196/266 (73.68%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  R+  H   ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNS 180
           F+LWMVE +N ER  S      D       G++    +     L   HH     SQ   S
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTV 240
            + + H    + +Q+SLRK LVFFV LTAKFPLV+IFLLI+LYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

BLAST of MELO3C011654.2 vs. TAIR10
Match: AT1G74370.1 (RING/U-box superfamily protein)

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-56
Identity = 130/275 (47.27%), Postives = 165/275 (60.00%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGR----EEVLECPICWESFNIVE 60
           MWN AS  +    G  S   + +      + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 61  NVPHVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 120
           NVP+VLWCGHT+CK C+LGLQ A V+K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 121 CKNYFLLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQ 180
            KN++LLWMVE++N  R ++           P         Q    N   G     L  +
Sbjct: 121 SKNFYLLWMVESMNGSRSEA-----------PSDNKRVASGQRDLRNRCDGVSNTALGDE 180

Query: 181 GPNSANSHFHN-----FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAI 240
           G     S ++      F   RL  S+RK +    HL AKFPLV+IFLL+ LYA+P SAA+
Sbjct: 181 GLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAV 240

Query: 241 LALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           L +Y  VT   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 LGVYFFVTFALAVPSFLVLYFAFPSLNWLIREIAT 261

BLAST of MELO3C011654.2 vs. TAIR10
Match: AT1G69330.1 (RING/U-box superfamily protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 118/235 (50.21%), Postives = 151/235 (64.26%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GLK S + ++  +++CSDDE+S+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENINVERVKSHSAFSGDPLIFPVSGSS-------SRVNQVSHNNLRRGHHVRQL 180
           FLLWMVE++N +R                  S+       S  N  S+NNL     +R  
Sbjct: 121 FLLWMVESLNGDRTXXXXXXXXXXXXTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLR-- 180

Query: 181 DSQGPNSANSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPAS 228
            +Q  +    H H+    R   S  K L FF+  T+KFP VIIFLLIV +A+P S
Sbjct: 181 -NQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGS 231

BLAST of MELO3C011654.2 vs. TAIR10
Match: AT1G21651.1 (zinc ion binding)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0

Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

BLAST of MELO3C011654.2 vs. TAIR10
Match: AT1G21650.3 (Preprotein translocase SecA family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0

Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

BLAST of MELO3C011654.2 vs. Swiss-Prot
Match: sp|Q13049|TRI32_HUMAN (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 25/67 (37.31%), Postives = 36/67 (53.73%), Query Frame = 0

Query: 34  LSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 93
           L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +            
Sbjct: 9   LNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------G 65

Query: 94  ISCPWCN 101
           + CP+C+
Sbjct: 69  VRCPFCS 65

BLAST of MELO3C011654.2 vs. Swiss-Prot
Match: sp|Q8CH72|TRI32_MOUSE (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 26/75 (34.67%), Postives = 38/75 (50.67%), Query Frame = 0

Query: 26  ATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 85
           A   +   L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 86  LPVQLPLFISCPWCN 101
                   + CP+C+
Sbjct: 62  -------GVRCPFCS 66

BLAST of MELO3C011654.2 vs. TrEMBL
Match: tr|A0A1S3BDF4|A0A1S3BDF4_CUCME (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.3e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of MELO3C011654.2 vs. TrEMBL
Match: tr|A0A0A0K8G4|A0A0A0K8G4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.3e-142
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

BLAST of MELO3C011654.2 vs. TrEMBL
Match: tr|M5WTL5|M5WTL5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G259000 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 5.9e-103
Identity = 196/268 (73.13%), Postives = 231/268 (86.19%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GLK+ S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-PLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   ++P +G++S  +QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 SANSHFHNF-NLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
             + H +N+ ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LV
Sbjct: 181 --HVHVNNYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           TV+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 TVVFALPSFLLLYFAYPSLDWLVREIIT 266

BLAST of MELO3C011654.2 vs. TrEMBL
Match: tr|A0A2N9GZ50|A0A2N9GZ50_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32531 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 7.3e-101
Identity = 195/268 (72.76%), Postives = 223/268 (83.21%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MW+FASNC+AG  GLK+ S   +  A ECSDDE SS   REE LECPICWESFNIVENVP
Sbjct: 1   MWSFASNCIAGNVGLKNDSINQTQAACECSDDEASSIVSREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNL+FP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLRFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGDPLI-FPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE+++ +RVKSHS+FS D    +P  G+     QVSH NLRRG +VR  +  G N
Sbjct: 121 FLLWMVESMHGDRVKSHSSFSRDQQSQWPTDGNLPMGGQVSHGNLRRGQYVRHPEPSGSN 180

Query: 181 SANSHFHNF-NLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
             +    N+ ++ER  SSLRK L+FFVHLTAKFPLV+IFLLIVLYA+PASAAILALY+LV
Sbjct: 181 HDHGRLSNYLSVERFHSSLRKSLIFFVHLTAKFPLVVIFLLIVLYAIPASAAILALYILV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           TVLFALPSFL+LYFAYPSLDWL+REI+T
Sbjct: 241 TVLFALPSFLVLYFAYPSLDWLVREIVT 268

BLAST of MELO3C011654.2 vs. TrEMBL
Match: tr|A0A2P5FEW4|A0A2P5FEW4_9ROSA (Cdk-activating kinase assembly factor OS=Trema orientalis OX=63057 GN=TorRG33x02_079080 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.6e-100
Identity = 197/268 (73.51%), Postives = 227/268 (84.70%), Query Frame = 0

Query: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  G K    K    A+ECSDDE+SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGSKKDHLK---PASECSDDEVSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGDP-LIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N ER K+ S +S D    +P++G++S  +QVSH NLRRGHH+R  ++   N
Sbjct: 121 FLLWMVESMNGERGKTPSTYSEDQHSSWPINGNTSMASQVSHCNLRRGHHIRHPEASRSN 180

Query: 181 SANSHFHNF-NLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
             + H +N+  +ERL SS+RK L FFVHLTAKFPLV+IFLLIVLYA+PASAAILALY+LV
Sbjct: 181 D-HVHLNNYLTMERLHSSIRKSLFFFVHLTAKFPLVVIFLLIVLYAIPASAAILALYILV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           TVLFALPSFLILYFAYPSLDWL+REI+T
Sbjct: 241 TVLFALPSFLILYFAYPSLDWLVREIVT 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008445733.15.0e-146100.00PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 P... [more]
XP_004140883.12.0e-14297.36PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.... [more]
XP_022949151.14.6e-13190.57uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 unchar... [more]
XP_023523716.11.3e-13090.19uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.... [more]
XP_022998137.11.5e-12989.81uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharac... [more]
Match NameE-valueIdentityDescription
AT3G29270.11.9e-8361.65RING/U-box superfamily protein[more]
AT1G74370.12.0e-5647.27RING/U-box superfamily protein[more]
AT1G69330.11.4e-5450.21RING/U-box superfamily protein[more]
AT1G21651.12.5e-0638.98zinc ion binding[more]
AT1G21650.32.5e-0638.98Preprotein translocase SecA family protein[more]
Match NameE-valueIdentityDescription
sp|Q13049|TRI32_HUMAN1.6e-0537.31E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2[more]
sp|Q8CH72|TRI32_MOUSE1.6e-0534.67E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BDF4|A0A1S3BDF4_CUCME3.3e-146100.00uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=... [more]
tr|A0A0A0K8G4|A0A0A0K8G4_CUCSA1.3e-14297.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1[more]
tr|M5WTL5|M5WTL5_PRUPE5.9e-10373.13Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G259000 PE=4 SV=1[more]
tr|A0A2N9GZ50|A0A2N9GZ50_FAGSY7.3e-10172.76Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32531 PE=4 SV=1[more]
tr|A0A2P5FEW4|A0A2P5FEW4_9ROSA1.6e-10073.51Cdk-activating kinase assembly factor OS=Trema orientalis OX=63057 GN=TorRG33x02... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR017907Znf_RING_CS
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011654.2.1MELO3C011654.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 32..137
e-value: 1.6E-11
score: 45.6
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 45..97
e-value: 5.5E-9
score: 35.8
NoneNo IPR availablePANTHERPTHR13139RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 17..264
NoneNo IPR availablePANTHERPTHR13139:SF49SUBFAMILY NOT NAMEDcoord: 17..264
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 40..102
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 45..100
score: 10.158

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011654.2Csa6G042350Cucumber (Chinese Long) v2cumedB455
MELO3C011654.2CSPI06G03610Wild cucumber (PI 183967)cpimedB464
MELO3C011654.2Cucsa.364980Cucumber (Gy14) v1cgymedB588
MELO3C011654.2CsGy6G003570Cucumber (Gy14) v2cgybmedB413
MELO3C011654.2Bhi04G001628Wax gourdmedwgoB329
MELO3C011654.2CsaV3_6G003900Cucumber (Chinese Long) v3cucmedB473
The following gene(s) are paralogous to this gene:

None