CSPI06G03610 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G03610
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING/U-box superfamily protein
Location	Chr6 : 3297859 .. 3300306 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCATTCCTGTTCAATCTCAAAACCCTTCCCCTTTCCCAATTTCAAAATAAAAACAAAAACTAACTCAACCAAAAAAAAAAAATATCCCGATTCAACCTTCTCTTCTTCAAATCCTCCCAATACTCATCCACTGGGATTTGAAGGGTAAGATCGCCTCATCATAGTTGAATACATATTTCTCTCTTGCCTTCTGTTCTTTGCTCATTCTGTTTGCTTTTGATTGACTCTGAATCTACAATGTTCTTCCTCAATTTTCATCGTTGTGCATTTCCGCCCACTTCTGTTTGTATTTTCGGAATTGTTTGTTTTTATGCCATCTATTTCATTTTCCGTGGTTTGTTCTTGTGTGTTCTGCCTTGTGATTTAATTATTTTGCCGCGCCTTGTACAATTAATGGGGTTTGTCTGTAATGCAGTGTTAATCCTTGATATGATTTGGGAAACTGCTTTAGATTAGGTTTATATCTGGCTTACAGAACAATCCATTATCTGTCGGTAATTTTCTTGTTCCAACTATGTTGTATTTAATGTTTTTAATTCTTTTCAAGTAACCCATCTCTTTTTTGGACAGGTAGGGAAATTTTTGCACGTCCCTTCTTAAGAATGTTCTAAAGACATCGTAGAGTTCTATTTCTGTTTATACTCGTGTAAATTAGAAAATAGATGTTCAATCTTTTGCAAGCCTTCCTTCCATAGCACTGCAACTTAGTCTAGTTAGGGATTGTTCAATGATCTTATTTAAGTAGTTAAACATCATTCGTTATCATGTTGAATTCAATCCAATCTTCTCTAATGTTATATATCTTTTGATCTCAAATTGATTGTACTTCTGATGTTTTTAACTTTGTATAGTAGTGTTGTCTGGTAGGATCCTTTGTTGATTTAGTTGGTTTTTCCCCTTTTTTTCTCTTTTCTTTCAGGTTCATCTCTTATATAAAGCATAATTGAGTCATTGAGCATAAAGTTAATCACTAATAAGCCTTGGTCAAATGCAACTATAGCTACTATTGCAGGTGGTCATTTTTGACCAGTAGTTGCCTGTTGTTAGAATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAAAGTGTATACCATAAGGGGCAATGTGAATTGTGACTAGTAGAGACCATCACTTCAGGACTTTTACTTCTACAAGCCAGTCACATCTTTCAGGAAAGTTGACTTCATATTTTAGCTTGTTGATACATTAGCTTCCCAATTTGCCGACATTTCAACTGGATCGTTCATATTCAACACATCAAACTCGAGTGGACGACAATTGCTGTCCCAGGTAAAATATAGGTCTTGTTTTCGGTTTAGTGTCCTAATTTATTTCTTTTTCCATTAAAAATCTTCTTTAGTAAGGAAGTACGAGGAATTTGGTTATTTCTGATGTCATCTTGTTGCTTCTTTGTGCCATATTAACTGTCATCGTGTAATAGATCTGGAAATTAGATGTTGTATGGACAAAGCTATAAGAGGCTCAAGCCCTTGCTTGTATAGAGGATTGGACTAATTATATGCCAGTATCCACCCCACCCCACCCCCAAATAATAAAAAATTAAAAATAGTAAGAAGGTGAAGTTTTAGTTTAGTACCTGAAACTTTTCAAGATGTAAAAATAAATCAAACTATAGGGCCGACTTAAAAGCTTTTAAACTCGGCAACAAGTTATACTCGAC

mRNA sequence

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAA

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAA

Homology

[Close]

BLAST of CSPI06G03610 vs. TrEMBL
Match: A0A0A0K8G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 2.4e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CSPI06G03610 vs. TrEMBL
Match: M5WTL5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010047mg PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.0e-104
Identity = 196/267 (73.41%), Postives = 230/267 (86.14%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GLK+ S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           + + + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LVT
Sbjct: 181 HVHVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILVT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of CSPI06G03610 vs. TrEMBL
Match: C6TIH4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G059100 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-100
Identity = 198/268 (73.88%), Postives = 218/268 (81.34%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GLK+ S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

[Close]

BLAST of CSPI06G03610 vs. TrEMBL
Match: A0A0B2PHT9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032019 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-100
Identity = 198/268 (73.88%), Postives = 218/268 (81.34%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GLK+ S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

[Close]

BLAST of CSPI06G03610 vs. TrEMBL
Match: V4UXG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012457mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.7e-100
Identity = 198/272 (72.79%), Postives = 226/272 (83.09%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS C+AG  GLK+ S K+S  A+ECSDD++SS   REE LECPICWESFN+VENVP
Sbjct: 1   MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFR+VYKGNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRG-HHVRQLDSQGP 180
           FLLWMVE++N +RVKSHS F  D Q     SG+S+ GNQ++  N RRG HH        P
Sbjct: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180

Query: 181 NNAN-SHFHSFN---LERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILAL 240
             +N  H H+ N   +ER+ SSLRK L+FFVHLTAKFPLV+IFLLIV+YA+PASAAILAL
Sbjct: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240

Query: 241 YVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           Y+LVT+LFALPSFLILYFAYPSLDWL+REI+T
Sbjct: 241 YILVTILFALPSFLILYFAYPSLDWLVREIVT 272

[Close]

BLAST of CSPI06G03610 vs. TAIR10
Match: AT3G29270.1 (AT3G29270.1 RING/U-box superfamily protein)

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 163/266 (61.28%), Postives = 195/266 (73.31%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  R+  H   ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNN 180
           F+LWMVE +N ER  S      D       G +    +     L   HH     SQ   +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTV 240
            + + H    + +Q+SLRK LVFFV LTAKFPLV+IFLLI+LYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

[Close]

BLAST of CSPI06G03610 vs. TAIR10
Match: AT1G69330.1 (AT1G69330.1 RING/U-box superfamily protein)

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-67
Identity = 148/271 (54.61%), Postives = 187/271 (69.00%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GLK S + S+  +++CSDDE+S+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENINVERVK-----SH-SAFSGDQLVFPVSGTS-SRGNQVSHNNLRRGHHVRQL 180
           FLLWMVE++N +R       SH S  + +Q   P    S S GN  S+NNL     +R  
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLR-- 180

Query: 181 DSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILA 240
            +Q  +    H HS    R   S  K L FF+  T+KFP VIIFLLIV +A+P S  ILA
Sbjct: 181 -NQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILA 240

Query: 241 LYVLVTVLFALPSFLILYFAYPSLDWLMREI 264
           LY L+T+LFA+P+ L+LYFAYP L+ L+ EI
Sbjct: 241 LYFLLTILFAVPAGLVLYFAYPILERLVNEI 267

[Close]

BLAST of CSPI06G03610 vs. TAIR10
Match: AT1G74370.1 (AT1G74370.1 RING/U-box superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-56
Identity = 130/275 (47.27%), Postives = 167/275 (60.73%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGR----EEVLECPICWESFNIVE 60
           MWN AS  +    G  S   +++      + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 61  NVPHVLWCGHTLCKNCILGLQWAVV-KFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 120
           NVP+VLWCGHT+CK C+LGLQ A+V K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 121 CKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQ 180
            KN++LLWMVE++N  R ++           P         Q    N   G     L  +
Sbjct: 121 SKNFYLLWMVESMNGSRSEA-----------PSDNKRVASGQRDLRNRCDGVSNTALGDE 180

Query: 181 GPNNANSHFHS-----FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAI 240
           G  +  S ++      F   RL  S+RK +    HL AKFPLV+IFLL+ LYA+P SAA+
Sbjct: 181 GLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAV 240

Query: 241 LALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           L +Y  VT   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 LGVYFFVTFALAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]

BLAST of CSPI06G03610 vs. TAIR10
Match: AT1G21651.1 (AT1G21651.1 zinc ion binding)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 1


Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]

BLAST of CSPI06G03610 vs. TAIR10
Match: AT1G21650.3 (AT1G21650.3 Preprotein translocase SecA family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 1


Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]

BLAST of CSPI06G03610 vs. NCBI nr
Match: gi|449446247|ref|XP_004140883.1| (PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 3.4e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CSPI06G03610 vs. NCBI nr
Match: gi|659089886|ref|XP_008445733.1| (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo])

HSP 1 Score: 514.2 bits (1323), Expect = 1.3e-142
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of CSPI06G03610 vs. NCBI nr
Match: gi|595940309|ref|XP_007215820.1| (hypothetical protein PRUPE_ppa010047mg [Prunus persica])

HSP 1 Score: 385.6 bits (989), Expect = 7.2e-104
Identity = 196/267 (73.41%), Postives = 230/267 (86.14%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GLK+ S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           + + + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LVT
Sbjct: 181 HVHVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILVT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of CSPI06G03610 vs. NCBI nr
Match: gi|645249645|ref|XP_008230837.1| (PREDICTED: uncharacterized protein LOC103330072 [Prunus mume])

HSP 1 Score: 384.0 bits (985), Expect = 2.1e-103
Identity = 197/267 (73.78%), Postives = 230/267 (86.14%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GLK+ S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +RVKSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRVKSHSTFSGDNHPVWPANGNASVGSQVSHTHHRRVHHIRHIEPLGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           +A  + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+L+T
Sbjct: 181 HALVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILIT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of CSPI06G03610 vs. NCBI nr
Match: gi|359806827|ref|NP_001241055.1| (uncharacterized protein LOC100809368 [Glycine max])

HSP 1 Score: 374.0 bits (959), Expect = 2.2e-100
Identity = 198/268 (73.88%), Postives = 218/268 (81.34%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GLK+ S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

The following BLAST results are available for this feature:

BLAST of CSPI06G03610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G03610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8G4_CUCSA	2.4e-146	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042350 PE=4 SV=1	[more]
M5WTL5_PRUPE	5.0e-104	73.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010047mg PE=4 SV=1	[more]
C6TIH4_SOYBN	1.5e-100	73.88	Uncharacterized protein OS=Glycine max GN=GLYMA_13G059100 PE=2 SV=1	[more]
A0A0B2PHT9_GLYSO	1.5e-100	73.88	Uncharacterized protein OS=Glycine soja GN=glysoja_032019 PE=4 SV=1	[more]
V4UXG8_9ROSI	5.7e-100	72.79	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012457mg PE=4 SV=1	[more]

BLAST of CSPI06G03610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G29270.1	2.2e-82	61.28	RING/U-box superfamily protein	[more]
AT1G69330.1	1.1e-67	54.61	RING/U-box superfamily protein	[more]
AT1G74370.1	1.6e-56	47.27	RING/U-box superfamily protein	[more]
AT1G21651.1	2.5e-06	38.98	zinc ion binding	[more]
AT1G21650.3	2.5e-06	38.98	Preprotein translocase SecA family protein	[more]

BLAST of CSPI06G03610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446247\|ref\|XP_004140883.1\|	3.4e-146	100.00	PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus]	[more]
gi\|659089886\|ref\|XP_008445733.1\|	1.3e-142	97.36	PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo]	[more]
gi\|595940309\|ref\|XP_007215820.1\|	7.2e-104	73.41	hypothetical protein PRUPE_ppa010047mg [Prunus persica]	[more]
gi\|645249645\|ref\|XP_008230837.1\|	2.1e-103	73.78	PREDICTED: uncharacterized protein LOC103330072 [Prunus mume]	[more]
gi\|359806827\|ref\|NP_001241055.1\|	2.2e-100	73.88	uncharacterized protein LOC100809368 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR027370	Znf-RING_LisH

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G03610.1	CSPI06G03610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 45..100 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 38..100 score: 4.3
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73 scor
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 45..97 score: 5.
None	No IPR available	PANTHER	PTHR13139	RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 18..265 score: 5.4E
None	No IPR available	PANTHER	PTHR13139:SF47	SUBFAMILY NOT NAMED	coord: 18..265 score: 5.4E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 40..102 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G03610	Csa6G042350	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G03610	MELO3C011654	Melon (DHL92) v3.5.1	cpimeB475
CSPI06G03610	MELO3C011654.2	Melon (DHL92) v3.6.1	cpimedB464
CSPI06G03610	CsaV3_6G003900	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G03610	Bhi04G001628	Wax gourd	cpiwgoB595
CSPI06G03610	Cucsa.364980	Cucumber (Gy14) v1	cgycpiB540
CSPI06G03610	CsGy6G003570	Cucumber (Gy14) v2	cgybcpiB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G03610	Watermelon (97103) v2	cpiwmbB519
CSPI06G03610	Watermelon (97103) v2	cpiwmbB531
CSPI06G03610	Cucurbita maxima (Rimu)	cmacpiB933
CSPI06G03610	Cucurbita maxima (Rimu)	cmacpiB377
CSPI06G03610	Cucurbita moschata (Rifu)	cmocpiB366
CSPI06G03610	Cucurbita moschata (Rifu)	cmocpiB912
CSPI06G03610	Watermelon (Charleston Gray)	cpiwcgB528
CSPI06G03610	Cucurbita pepo (Zucchini)	cpecpiB148
CSPI06G03610	Cucurbita pepo (Zucchini)	cpecpiB335
CSPI06G03610	Bottle gourd (USVL1VR-Ls)	cpilsiB481