CsGy6G003570 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G003570
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionZinc finger, C3HC4 type (RING finger) protein
LocationChr6 : 3308382 .. 3309179 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCCGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAGTCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAA

mRNA sequence

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCCGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAGTCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAA

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCCGGACTGAAGAGCAGCTCCCGAAAATCATCACATACTGCCACAGAGTGTTCGGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAGTCCTTCAATATTGTTGAGAACGTGCCCCATGTTTTGTGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGTCCCTGGTGCAACCTCTTATCCTTCCGTCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGAGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAGTTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTCGTTCACTTGACAGCCAAGTTTCCTTTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACAGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACATAA

Protein sequence

MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT
Homology
[Close]
BLAST of CsGy6G003570 vs. NCBI nr
Match: XP_004140883.1 (PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.1 PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_011656553.1 PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >KGN46000.1 hypothetical protein Csa_6G042350 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 1.1e-145
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]
BLAST of CsGy6G003570 vs. NCBI nr
Match: XP_008445733.1 (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 4.4e-142
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]
BLAST of CsGy6G003570 vs. NCBI nr
Match: XP_022949151.1 (uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949154.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949155.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949156.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949157.1 uncharacterized protein LOC111452589 [Cucurbita moschata])

HSP 1 Score: 481.1 bits (1237), Expect = 2.4e-132
Identity = 244/265 (92.08%), Postives = 253/265 (95.47%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKSSS+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQV H+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

[Close]
BLAST of CsGy6G003570 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 5.4e-132
Identity = 243/265 (91.70%), Postives = 252/265 (95.09%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQV H+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

[Close]
BLAST of CsGy6G003570 vs. NCBI nr
Match: XP_022998137.1 (uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998139.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998140.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998141.1 uncharacterized protein LOC111492874 [Cucurbita maxima])

HSP 1 Score: 476.5 bits (1225), Expect = 6.0e-131
Identity = 242/265 (91.32%), Postives = 251/265 (94.72%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQV H+NLRRGHHVRQLD Q  NNA
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDLQRSNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSH HSFNLERL+SSL KLLVFFVHLTAKFPLVIIFLLI+LYAVPASAAILALY+LVTVL
Sbjct: 181 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 264

[Close]
BLAST of CsGy6G003570 vs. TAIR10
Match: AT3G29270.1 (RING/U-box superfamily protein)

HSP 1 Score: 302.0 bits (772), Expect = 3.7e-82
Identity = 163/266 (61.28%), Postives = 195/266 (73.31%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G K+  R+  H   ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNN 180
           F+LWMVE +N ER  S      D       G +    +     L   HH     SQ   +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTV 240
            + + H    + +Q+SLRK LVFFV LTAKFPLV+IFLLI+LYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

[Close]
BLAST of CsGy6G003570 vs. TAIR10
Match: AT1G69330.1 (RING/U-box superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-56
Identity = 123/235 (52.34%), Postives = 155/235 (65.96%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GLK S + S+  +++CSDDE+S+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENINVERV------KSHSAFSGDQLVFPVSGTS-SRGNQVSHNNLRRGHHVRQL 180
           FLLWMVE++N +R             + +Q   P    S S GN  S+NNL     +R  
Sbjct: 121 FLLWMVESLNGDRTXXXXXXXXXXXXTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLR-- 180

Query: 181 DSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPAS 228
            +Q  +    H HS    R   S  K L FF+  T+KFP VIIFLLIV +A+P S
Sbjct: 181 -NQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGS 231

[Close]
BLAST of CsGy6G003570 vs. TAIR10
Match: AT1G74370.1 (RING/U-box superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-56
Identity = 130/275 (47.27%), Postives = 167/275 (60.73%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGR----EEVLECPICWESFNIVE 60
           MWN AS  +    G  S   +++      + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 61  NVPHVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 120
           NVP+VLWCGHT+CK C+LGLQ A V+K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 121 CKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQ 180
            KN++LLWMVE++N  R ++           P         Q    N   G     L  +
Sbjct: 121 SKNFYLLWMVESMNGSRSEA-----------PSDNKRVASGQRDLRNRCDGVSNTALGDE 180

Query: 181 GPNNANSHFHS-----FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAI 240
           G  +  S ++      F   RL  S+RK +    HL AKFPLV+IFLL+ LYA+P SAA+
Sbjct: 181 GLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAV 240

Query: 241 LALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           L +Y  VT   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 LGVYFFVTFALAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]
BLAST of CsGy6G003570 vs. TAIR10
Match: AT1G21651.1 (zinc ion binding)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0 

Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]
BLAST of CsGy6G003570 vs. TAIR10
Match: AT1G21650.3 (Preprotein translocase SecA family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0 

Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]
BLAST of CsGy6G003570 vs. Swiss-Prot
Match: sp|Q13049|TRI32_HUMAN (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 25/67 (37.31%), Postives = 36/67 (53.73%), Query Frame = 0 

Query: 34  LSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 93
           L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +            
Sbjct: 9   LNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------G 65

Query: 94  ISCPWCN 101
           + CP+C+
Sbjct: 69  VRCPFCS 65

[Close]
BLAST of CsGy6G003570 vs. Swiss-Prot
Match: sp|Q8CH72|TRI32_MOUSE (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 26/75 (34.67%), Postives = 38/75 (50.67%), Query Frame = 0 

Query: 26  ATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 85
           A   +   L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 86  LPVQLPLFISCPWCN 101
                   + CP+C+
Sbjct: 62  -------GVRCPFCS 66

[Close]
BLAST of CsGy6G003570 vs. TrEMBL
Match: tr|A0A0A0K8G4|A0A0A0K8G4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 7.4e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]
BLAST of CsGy6G003570 vs. TrEMBL
Match: tr|A0A1S3BDF4|A0A1S3BDF4_CUCME (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.9e-142
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGLKSSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]
BLAST of CsGy6G003570 vs. TrEMBL
Match: tr|M5WTL5|M5WTL5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G259000 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.6e-103
Identity = 196/267 (73.41%), Postives = 230/267 (86.14%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GLK+ S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           + + + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LVT
Sbjct: 181 HVHVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILVT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]
BLAST of CsGy6G003570 vs. TrEMBL
Match: tr|A0A2N9GZ50|A0A2N9GZ50_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32531 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 6.6e-102
Identity = 196/268 (73.13%), Postives = 225/268 (83.96%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MW+FASNC+AG  GLK+ S   +  A ECSDDE SS   REE LECPICWESFNIVENVP
Sbjct: 1   MWSFASNCIAGNVGLKNDSINQTQAACECSDDEASSIVSREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNL+FP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLRFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE+++ +RVKSHS+FS D Q  +P  G    G QVSH NLRRG +VR  +  G N
Sbjct: 121 FLLWMVESMHGDRVKSHSSFSRDQQSQWPTDGNLPMGGQVSHGNLRRGQYVRHPEPSGSN 180

Query: 181 NANSHFHSF-NLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
           + +    ++ ++ER  SSLRK L+FFVHLTAKFPLV+IFLLIVLYA+PASAAILALY+LV
Sbjct: 181 HDHGRLSNYLSVERFHSSLRKSLIFFVHLTAKFPLVVIFLLIVLYAIPASAAILALYILV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           TVLFALPSFL+LYFAYPSLDWL+REI+T
Sbjct: 241 TVLFALPSFLVLYFAYPSLDWLVREIVT 268

[Close]
BLAST of CsGy6G003570 vs. TrEMBL
Match: tr|A0A2P4M4Q1|A0A2P4M4Q1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63436 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.9e-101
Identity = 194/268 (72.39%), Postives = 229/268 (85.45%), Query Frame = 0 

Query: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSS-DGREEVLECPICWESFNIVENVP 60
           MW+FASNC+AG  GLK+ S   +  A+ECSDDE SS   REE LECPICWESFNIVENVP
Sbjct: 1   MWSFASNCIAGNIGLKNDSINQTQAASECSDDEASSIASREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE+++ +RVKSHS+F+ D Q ++P +G    G QVS+ NLRRG ++R  +  G +
Sbjct: 121 FLLWMVESMHGDRVKSHSSFARDQQSLWPTNGNLPMGGQVSNGNLRRGQYIRHPEPSGSH 180

Query: 181 NANSHFHSF-NLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
           +A+    ++ ++E L SSLRK L+FFVH+TAKFPLV+IFLLIVLYA+PASAAILALY+LV
Sbjct: 181 HAHGRLSNYLSVETLHSSLRKSLIFFVHMTAKFPLVVIFLLIVLYAIPASAAILALYILV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           TVLFALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 TVLFALPSFLVLYFAYPSLDWLVREIIT 268

The following BLAST results are available for this feature:
BLAST of CsGy6G003570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140883.11.1e-145100.00PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.... [more]
XP_008445733.14.4e-14297.36PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 P... [more]
XP_022949151.12.4e-13292.08uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 unchar... [more]
XP_023523716.15.4e-13291.70uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.... [more]
XP_022998137.16.0e-13191.32uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharac... [more]
BLAST of CsGy6G003570 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G29270.13.7e-8261.28RING/U-box superfamily protein[more]
AT1G69330.12.6e-5652.34RING/U-box superfamily protein[more]
AT1G74370.12.6e-5647.27RING/U-box superfamily protein[more]
AT1G21651.12.5e-0638.98zinc ion binding[more]
AT1G21650.32.5e-0638.98Preprotein translocase SecA family protein[more]
BLAST of CsGy6G003570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q13049|TRI32_HUMAN1.6e-0537.31E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2[more]
sp|Q8CH72|TRI32_MOUSE1.6e-0534.67E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2[more]
BLAST of CsGy6G003570 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8G4|A0A0A0K8G4_CUCSA7.4e-146100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1[more]
tr|A0A1S3BDF4|A0A1S3BDF4_CUCME2.9e-14297.36uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=... [more]
tr|M5WTL5|M5WTL5_PRUPE1.6e-10373.41Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G259000 PE=4 SV=1[more]
tr|A0A2N9GZ50|A0A2N9GZ50_FAGSY6.6e-10273.13Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32531 PE=4 SV=1[more]
tr|A0A2P4M4Q1|A0A2P4M4Q1_QUESU1.9e-10172.39Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63436 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR017907Znf_RING_CS
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G003570.1CsGy6G003570.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 32..137
e-value: 1.6E-11
score: 45.6
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 45..97
e-value: 5.5E-9
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..33
NoneNo IPR availablePANTHERPTHR13139:SF49SUBFAMILY NOT NAMEDcoord: 18..264
NoneNo IPR availablePANTHERPTHR13139RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 18..264
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 40..102
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 45..100
score: 10.158