MELO3C011332 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011332
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGanglioside-induced differentiation-associated protein
Locationchr3 : 24594479 .. 24595628 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTTGGAACTTTTCATTATGAACTGCTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGTCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGGTACTGAAATTAAATTACTCTTCTTGTTCTTCGAAACCAGAGTGCGTTAGTGTGTGTGTATGTGTTGATTCATCTCTGTTTTGGGTTTAGCGCGGTTTGTAAGCAGTCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCTCTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATTGTCCTGGAATTTCAAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTCCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACCGTCGGCCGCCTCATGCTTGACGCCGAGTAAGCATTCTTCCTTCCTCCCCTGTAATTGAAACTTCCCATTTCATAAAAAGGCAAAAAGGTCAGATCTTTATGGCGTGGTTGTTGTAATTTCTTTGACTTGCAGGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTTTGGGAACACGTTAGAAGGAAAGAGATGGAGTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTTGCTTGATGAAATGAAGACTCAAAGATGGGGTTGGGGATACAGGGGTCTTTTTTGGTTTTGTTGTAGGAGTTTTTTTCTCTTTTTTTTTCCTCTTTGGTAGTAATGGCAGAAAATATTGCTAAGTGTTGTAGACTTTCTGTAGTAGGCAAAGGGAAAAAGGTTAATGGGCTTTCCTTGTGAAGAAAGGAAGAGTTAATACTTCACAGGAAAAGCAGTGAATAGGTTTAAATGAAGTTACTCTGTAATAAAATATATGTTCATGGCATATTTGAAAATGGCATGTACTGAAATATAAATAAAATGAACAGGTTTTAACTTTTGACC

mRNA sequence

GACTTGGAACTTTTCATTATGAACTGCTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGTCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGCGCGGTTTGTAAGCAGTCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCTCTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATTGTCCTGGAATTTCAAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTCCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACCGTCGGCCGCCTCATGCTTGACGCCGAGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTTTGGGAACACGTTAGAAGGAAAGAGATGGAGTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTTGCTTGATGAAATGAAGACTCAAAGATGGGGTTGGGGATACAGGGGTCTTTTTTGGTTTTGTTGTAGGAGTTTTTTTCTCTTTTTTTTTCCTCTTTGGTAGTAATGGCAGAAAATATTGCTAAGTGTTGTAGACTTTCTGTAGTAGGCAAAGGGAAAAAGGTTAATGGGCTTTCCTTGTGAAGAAAGGAAGAGTTAATACTTCACAGGAAAAGCAGTGAATAGGTTTAAATGAAGTTACTCTGTAATAAAATATATGTTCATGGCATATTTGAAAATGGCATGTACTGAAATATAAATAAAATGAACAGGTTTTAACTTTTGACC

Coding sequence (CDS)

ATGAACTGCTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGTCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGCGCGGTTTGTAAGCAGTCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCTCTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATTGTCCTGGAATTTCAAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTCCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACCGTCGGCCGCCTCATGCTTGACGCCGAGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTTTGGGAACACGTTAGAAGGAAAGAGATGGAGTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTTGCTTGA

Protein sequence

MNCSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA*
Homology
[Close]
BLAST of MELO3C011332 vs. Swiss-Prot
Match: GDAP2_DROME (Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 41/140 (29.29%), Postives = 75/140 (53.57%), Query Frame = 1 

Query: 26  GRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCP 85
           G D+ GR V++  GK+FPA+ +  +   +YL   + P++K G + + Y HT +  T N P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 447

Query: 86  GISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEF 145
            +  L+ +Y  +P   K N++A Y +HP+  T++        M  A +  KV  +  VE 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 507

Query: 146 LWEHVRRKEMELPKFVYDHD 166
           L+  + + ++E+P ++ ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

[Close]
BLAST of MELO3C011332 vs. Swiss-Prot
Match: GDAP2_DROPS (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 41/140 (29.29%), Postives = 75/140 (53.57%), Query Frame = 1 

Query: 26  GRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCP 85
           G D+ GR V++  GK+FPA+ +  +   +YL   + P++K G + + Y HT +  T N P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 449

Query: 86  GISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEF 145
            +  L+ +Y  +P   K N++A Y +HP+  T++        M  A +  KV  +  VE 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 509

Query: 146 LWEHVRRKEMELPKFVYDHD 166
           L+  + + ++E+P ++ ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

[Close]
BLAST of MELO3C011332 vs. Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09
Identity = 47/187 (25.13%), Postives = 86/187 (45.99%), Query Frame = 1 

Query: 10  SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPF 69
           S+ L  +  ++     G D  GR V+++VG+  P   +      +Y    +   +    +
Sbjct: 329 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEY 388

Query: 70  TVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV---FFATVGR 129
            +VY HT +    N      LK +Y+ + I  K N++AVYF+HP+ +++V   FF T   
Sbjct: 389 VLVYFHT-LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFS- 448

Query: 130 LMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN-DYLRV 189
               + L +K+ +V  ++ L+  +  ++++ P FV ++D +           EN  Y   
Sbjct: 449 ---VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-----------ENGPYFAS 498

Query: 190 FSPSPSL 193
           + PSP L
Sbjct: 509 YPPSPDL 498

[Close]
BLAST of MELO3C011332 vs. Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09
Identity = 47/187 (25.13%), Postives = 86/187 (45.99%), Query Frame = 1 

Query: 10  SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPF 69
           S+ L  +  ++     G D  GR V+++VG+  P   +      +Y    +   +    +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEY 387

Query: 70  TVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV---FFATVGR 129
            +VY HT +    N      LK +Y+ + I  K N++AVYF+HP+ +++V   FF T   
Sbjct: 388 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFS- 447

Query: 130 LMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN-DYLRV 189
               + L +K+ +V  ++ L+  +  ++++ P FV ++D +           EN  Y   
Sbjct: 448 ---VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-----------ENGPYFAS 497

Query: 190 FSPSPSL 193
           + PSP L
Sbjct: 508 YPPSPDL 497

[Close]
BLAST of MELO3C011332 vs. Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 45/168 (26.79%), Postives = 85/168 (50.60%), Query Frame = 1 

Query: 6   SSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVY---LKDKIFP 65
           S + ++ L  +  ++     G D  GR+V+++VG+  P   +  +   +Y   + D +  
Sbjct: 323 SRARTEDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIHMMDHV-- 382

Query: 66  LLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV--- 125
             KD  + +VY HT +    N      LK +Y+ I +  K N++A+YF+HP+ +++V   
Sbjct: 383 TAKD--YVLVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTW 442

Query: 126 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEK 168
           FF T       + L +KV  V+ +  L+  +  +++E+P FV D+D +
Sbjct: 443 FFTT----FTVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYDAR 481

[Close]
BLAST of MELO3C011332 vs. TrEMBL
Match: A0A0A0LML6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 3.6e-110
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63
           SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL
Sbjct: 5   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 64

Query: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123
           LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT
Sbjct: 65  LKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 124

Query: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183
           VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYL
Sbjct: 125 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYL 184

Query: 184 RVFSPSPSLNSGVSTYSMRCFA 206
           RVFSPSPSLNSGVSTYSMRCFA
Sbjct: 185 RVFSPSPSLNSGVSTYSMRCFA 206

[Close]
BLAST of MELO3C011332 vs. TrEMBL
Match: A0A0D2Q4U4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G120400 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 122/206 (59.22%), Postives = 161/206 (78.16%), Query Frame = 1 

Query: 2   NCSSSSSLSD--QLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 61
           N SSS +LS   Q HLL K++VF++ GRDK GRNVLLI+GKYFPAR VSS+ +  YL++ 
Sbjct: 3   NISSSFTLSQSQQQHLLEKLDVFKVKGRDKRGRNVLLIIGKYFPARMVSSEILKKYLEET 62

Query: 62  IFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 121
           I+P L   PF+VVY+HTDV  +EN PGIS L+++Y+AIP+ +KNN+E VYFLHP LQ R+
Sbjct: 63  IYPKLGANPFSVVYVHTDVQKSENFPGISVLRSVYDAIPMNLKNNLEVVYFLHPGLQARL 122

Query: 122 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLE 181
           F AT GRL  D  LY+K+KYV R+EFLW+HVRR EM++P FV+DHDE+LE+ P+MD  LE
Sbjct: 123 FLATFGRLFFDGGLYSKLKYVSRLEFLWDHVRRLEMKIPDFVHDHDEELEYHPMMDYGLE 182

Query: 182 NDYLRVFSPSPSLNSGVSTYSMRCFA 206
           +D+ RV++  PS++  +S YSMRC A
Sbjct: 183 SDHPRVYTEPPSMDP-ISMYSMRCIA 207

[Close]
BLAST of MELO3C011332 vs. TrEMBL
Match: A0A067KYD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.7e-64
Identity = 121/208 (58.17%), Postives = 163/208 (78.37%), Query Frame = 1 

Query: 1   MNCSSSSSL---SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60
           M+ SS ++L   SDQ HL+ K+E+F++ GRDK GR VL ++GK FPAR VS++A+N YL 
Sbjct: 1   MSSSSPATLLSPSDQRHLIEKLEIFKIQGRDKRGRKVLRVIGKLFPARLVSNEALNNYLV 60

Query: 61  DKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120
           +KIFP L+  PF+VVY+HTDV  +EN PGIS L++IYEAIPI +KNN++AVYF+HP LQ+
Sbjct: 61  EKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKNNLQAVYFVHPGLQS 120

Query: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSD 180
           R+F AT GRL+    LY K+K++ R+EFLW+HVRR E+E+P F YDHDE+LE+ P MD  
Sbjct: 121 RLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHVRRNEIEIPDFAYDHDEELEYRPTMDYG 180

Query: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 206
           LE+D+ RV+   PS++S VS+YSMRC A
Sbjct: 181 LESDHPRVYY-GPSMDSPVSSYSMRCIA 207

[Close]
BLAST of MELO3C011332 vs. TrEMBL
Match: A0A0B0P842_GOSAR (Protein GDAP2 OS=Gossypium arboreum GN=F383_27057 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63
Identity = 121/206 (58.74%), Postives = 160/206 (77.67%), Query Frame = 1 

Query: 2   NCSSSSSLSD--QLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 61
           N SSS +LS   Q HLL K++VF + GRDK GRNVLLI+GKYFPAR VSS+ +  YL++ 
Sbjct: 3   NISSSFTLSQCQQHHLLEKLDVFNVRGRDKRGRNVLLIIGKYFPARMVSSEVLKKYLEET 62

Query: 62  IFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 121
           I+P L   PF+VVY+HTDV  +EN PGIS L+++Y+AIP+ +KNN+E VYFLHP LQ R+
Sbjct: 63  IYPKLGAKPFSVVYVHTDVQKSENFPGISVLRSVYDAIPMNLKNNLEVVYFLHPGLQARL 122

Query: 122 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLE 181
           F AT GRL  D  LY+K+KYV R++FLW+HVRR EM++P FV+DHDE+LE+ P+MD  LE
Sbjct: 123 FLATFGRLFFDGGLYSKLKYVSRLDFLWDHVRRLEMKIPDFVHDHDEELEYHPMMDYGLE 182

Query: 182 NDYLRVFSPSPSLNSGVSTYSMRCFA 206
           +D+ RV++  PS++  +S YSMRC A
Sbjct: 183 SDHPRVYTEPPSMDP-ISMYSMRCIA 207

[Close]
BLAST of MELO3C011332 vs. TrEMBL
Match: B9R8H4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1599820 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-62
Identity = 116/198 (58.59%), Postives = 158/198 (79.80%), Query Frame = 1 

Query: 8   SLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDG 67
           S SDQ +L+ K+EVF++ GRDK GR VL IVGK FPAR VSS+A++ YL+DKI+P L+ G
Sbjct: 9   SQSDQENLIDKLEVFKIQGRDKRGRKVLRIVGKLFPARLVSSEALHKYLEDKIYPKLEGG 68

Query: 68  PFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRL 127
           PF+VVY+HT+V  +EN PGIS L++IY+AIPI +KNN+EAVYF+HP++Q R+FFAT GRL
Sbjct: 69  PFSVVYLHTNVQRSENFPGISALRSIYDAIPINVKNNLEAVYFVHPAIQDRLFFATFGRL 128

Query: 128 MLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLRVFS 187
           +    LY K++YV R+ FLW+HVRR E E+P+F YDH+E+LE+ P+ D  LE+D+ RV+ 
Sbjct: 129 LFSGGLYGKLRYVSRLGFLWDHVRRNEFEIPQFAYDHEEELEYRPITDYGLESDHPRVYC 188

Query: 188 PSPSLNSGVSTYSMRCFA 206
            + S+++ VS YSMRC A
Sbjct: 189 GN-SVDNPVSMYSMRCIA 205

[Close]
BLAST of MELO3C011332 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-61
Identity = 106/202 (52.48%), Postives = 151/202 (74.75%), Query Frame = 1 

Query: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63
           SS  S  +Q  L+ K+E+F++HGRDK GR +L I+GK+FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123
           L   PF V+Y+HT V  +EN PGIS L+AIY+AIP+ +++N++ VYFLHP LQ+R+F AT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183
            GR +    LY K++Y+ RV++LWEHVRR E+E+P+FVYDHD+ LE+ P+MD   E+D+ 
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

Query: 184 RVFSPSPSLNSGVSTYSMRCFA 206
           RVF+   +++S VS++SMRC +
Sbjct: 182 RVFA-GAAVDSSVSSFSMRCIS 202

[Close]
BLAST of MELO3C011332 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 158.3 bits (399), Expect = 5.1e-39
Identity = 79/181 (43.65%), Postives = 118/181 (65.19%), Query Frame = 1 

Query: 16  LGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIH 75
           L  ++ F L G D++G  +  IVGKYFPAR VS++ +  Y+  KI     +GP  +VY+H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 76  TDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYN 135
           + V   +N PGI+ L+ IYE +P  IK+ ++ VYF+HP L++R+  AT+GRL+L   LY 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 136 KVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLR---VFSPSPSL 194
           K+KYV R+++LWE +++ E+E+P FV +HD  LE  P+ D  +E D  +   V S S SL
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQSSSFSL 228

[Close]
BLAST of MELO3C011332 vs. NCBI nr
Match: gi|659089058|ref|XP_008445305.1| (PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo])

HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-114
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1 

Query: 1   MNCSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 60
           MNCSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI
Sbjct: 1   MNCSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 60

Query: 61  FPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 120
           FPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF
Sbjct: 61  FPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 120

Query: 121 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN 180
           FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN
Sbjct: 121 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN 180

Query: 181 DYLRVFSPSPSLNSGVSTYSMRCFA 206
           DYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 181 DYLRVFSPSPSLNSGVSTYSMRCFA 205

[Close]
BLAST of MELO3C011332 vs. NCBI nr
Match: gi|449450478|ref|XP_004142989.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 5.2e-110
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63
           SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL
Sbjct: 5   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 64

Query: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123
           LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT
Sbjct: 65  LKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 124

Query: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183
           VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYL
Sbjct: 125 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYL 184

Query: 184 RVFSPSPSLNSGVSTYSMRCFA 206
           RVFSPSPSLNSGVSTYSMRCFA
Sbjct: 185 RVFSPSPSLNSGVSTYSMRCFA 206

[Close]
BLAST of MELO3C011332 vs. NCBI nr
Match: gi|470110088|ref|XP_004291319.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.4 bits (651), Expect = 8.7e-65
Identity = 118/202 (58.42%), Postives = 158/202 (78.22%), Query Frame = 1 

Query: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63
           S+  SLSDQ+ ++ K+EVF++ GRDK GR VL I+G  FPAR VS +A+N YL++ IFP 
Sbjct: 5   SARLSLSDQMKVIEKLEVFKIQGRDKHGRKVLRIIGNSFPARSVSKEALNEYLRENIFPS 64

Query: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123
           L++ PF++VY+HTDVH +EN PGIS L++IY+AIP  +KNN+EAV+F+HP LQ R+F AT
Sbjct: 65  LEEKPFSIVYVHTDVHRSENFPGISTLRSIYDAIPENVKNNLEAVHFVHPGLQARLFLAT 124

Query: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183
            GRL+    LY KV YV R+EFLW+ VRR EME+P+FVYDHDE+LEF P+MD  +E+D+ 
Sbjct: 125 FGRLLFTGGLYKKVNYVTRLEFLWDQVRRNEMEIPEFVYDHDEELEFRPMMDYGIESDHP 184

Query: 184 RVFSPSPSLNSGVSTYSMRCFA 206
           RV+   P+++S VS YSMRC A
Sbjct: 185 RVYGAPPAMDSSVSMYSMRCIA 206

[Close]
BLAST of MELO3C011332 vs. NCBI nr
Match: gi|823132986|ref|XP_012465216.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Gossypium raimondii])

HSP 1 Score: 252.7 bits (644), Expect = 5.6e-64
Identity = 122/206 (59.22%), Postives = 161/206 (78.16%), Query Frame = 1 

Query: 2   NCSSSSSLSD--QLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 61
           N SSS +LS   Q HLL K++VF++ GRDK GRNVLLI+GKYFPAR VSS+ +  YL++ 
Sbjct: 3   NISSSFTLSQSQQQHLLEKLDVFKVKGRDKRGRNVLLIIGKYFPARMVSSEILKKYLEET 62

Query: 62  IFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 121
           I+P L   PF+VVY+HTDV  +EN PGIS L+++Y+AIP+ +KNN+E VYFLHP LQ R+
Sbjct: 63  IYPKLGANPFSVVYVHTDVQKSENFPGISVLRSVYDAIPMNLKNNLEVVYFLHPGLQARL 122

Query: 122 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLE 181
           F AT GRL  D  LY+K+KYV R+EFLW+HVRR EM++P FV+DHDE+LE+ P+MD  LE
Sbjct: 123 FLATFGRLFFDGGLYSKLKYVSRLEFLWDHVRRLEMKIPDFVHDHDEELEYHPMMDYGLE 182

Query: 182 NDYLRVFSPSPSLNSGVSTYSMRCFA 206
           +D+ RV++  PS++  +S YSMRC A
Sbjct: 183 SDHPRVYTEPPSMDP-ISMYSMRCIA 207

[Close]
BLAST of MELO3C011332 vs. NCBI nr
Match: gi|802607266|ref|XP_012073707.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas])

HSP 1 Score: 251.9 bits (642), Expect = 9.6e-64
Identity = 121/208 (58.17%), Postives = 163/208 (78.37%), Query Frame = 1 

Query: 1   MNCSSSSSL---SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60
           M+ SS ++L   SDQ HL+ K+E+F++ GRDK GR VL ++GK FPAR VS++A+N YL 
Sbjct: 1   MSSSSPATLLSPSDQRHLIEKLEIFKIQGRDKRGRKVLRVIGKLFPARLVSNEALNNYLV 60

Query: 61  DKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120
           +KIFP L+  PF+VVY+HTDV  +EN PGIS L++IYEAIPI +KNN++AVYF+HP LQ+
Sbjct: 61  EKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKNNLQAVYFVHPGLQS 120

Query: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSD 180
           R+F AT GRL+    LY K+K++ R+EFLW+HVRR E+E+P F YDHDE+LE+ P MD  
Sbjct: 121 RLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHVRRNEIEIPDFAYDHDEELEYRPTMDYG 180

Query: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 206
           LE+D+ RV+   PS++S VS+YSMRC A
Sbjct: 181 LESDHPRVYY-GPSMDSPVSSYSMRCIA 207

The following BLAST results are available for this feature:
BLAST of MELO3C011332 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDAP2_DROME4.5e-1329.29Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1[more]
GDAP2_DROPS4.5e-1329.29Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 ... [more]
GDAP2_MOUSE1.8e-0925.13Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap... [more]
GDAP2_RAT1.8e-0925.13Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN... [more]
GDAP2_XENLA2.3e-0926.79Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 ... [more]
BLAST of MELO3C011332 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LML6_CUCSA3.6e-11098.51Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1[more]
A0A0D2Q4U4_GOSRA3.9e-6459.22Uncharacterized protein OS=Gossypium raimondii GN=B456_002G120400 PE=4 SV=1[more]
A0A067KYD2_JATCU6.7e-6458.17Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1[more]
A0A0B0P842_GOSAR1.9e-6358.74Protein GDAP2 OS=Gossypium arboreum GN=F383_27057 PE=4 SV=1[more]
B9R8H4_RICCO4.8e-6258.59Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1599820 PE=4 SV=1[more]
BLAST of MELO3C011332 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35750.11.2e-6152.48 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT3G10210.15.1e-3943.65 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
BLAST of MELO3C011332 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089058|ref|XP_008445305.1|2.7e-114100.00PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo][more]
gi|449450478|ref|XP_004142989.1|5.2e-11098.51PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sat... [more]
gi|470110088|ref|XP_004291319.1|8.7e-6558.42PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragar... [more]
gi|823132986|ref|XP_012465216.1|5.6e-6459.22PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Gossyp... [more]
gi|802607266|ref|XP_012073707.1|9.6e-6458.17PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatrop... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48762melon EST collection version 4.0transcribed_cluster
MU55717melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011332T1MELO3C011332T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48762MU48762transcribed_cluster
MU55717MU55717transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 31..166
score: 7.5
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 15..164
score: 0.
IPR001251CRAL-TRIO lipid binding domainunknownSSF52087CRAL/TRIO domaincoord: 20..153
score: 4.3
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 8..203
score: 9.4
NoneNo IPR availablePANTHERPTHR11106:SF58SUBFAMILY NOT NAMEDcoord: 8..203
score: 9.4