MU55717 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU55717
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Unknown protein
Location	chr3 : 24594660 .. 24596388 (-)
Sequence length	706

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGAGTTAAGAAGGTTGAGAGATCATATGAAGGATGAATGTTATGAATCATTCGATGATACAAACTCTATGACATTATACATATAGAGAAAGTCTACAACACTTAGCAATATTTTCTGCCATTACTACCAAAGAGGAAAAAAAAAAGAAAAAAACTCCTACAACAAAACCAAAAAAGACCCCTGTATCCCCAACCCATCTTTGAGTCTTCATTTCATCAAGCAAAACACCTCATGGAATACGTAGACACCCCAGAATTCAGAGACGGCGAAGGGGAGAAAACCCTGAGATAATCATTCTCCAAATCAGAGTCCATCACAGGATAGAACTCCAATTTCTCATCATGATCATACACAAACTTAGGGGAGGAAGGAAGAATGCTTACTCGGCGTCAAGCATGAGGCGGCCGACGGTGGCAAAAAAACACACGGGTTTGCAAGCTAGGGTGGAGGAAATAAACAGCTTCAATGTTGTTCTTAATGGTGATTGGAATGGCCTCATAGATTGCCTTGAGATTTGAAATTCCAGAACAATTCTCTGTCCAATGAACATCAGTGTGAATGTACACCACCGTGAAAGGCCCATCTTTAAGGAGAGGGAAAATCTTATCCTTCAAATAGACATTCACGGCCTGACTGCTTACAAACCGCGCTAAACCCAAAACAGAGATGAATCAACACATACACACACACTAACGCACTCTGGTTT

Library


Library category	ESTs
melon 46d library	1

Homology

[Close]

BLAST of MU55717 vs. TrEMBL
Match: A0A0A0LML6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.3e-59
Identity = 125/163 (76.69%), Postives = 130/163 (79.75%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTEN  GISNLKAIYEAIPITIKN
Sbjct: 45  ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKN 104

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           NIEAVYFLHPSLQTRVFF            + +  +  +RV  L           PKFVY
Sbjct: 105 NIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYV-KRVEFLWEHVRRKEMDLPKFVY 164

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDEKLEF PVM+SDLENDYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 165 DHDEKLEFCPVMESDLENDYLRVFSPSPSLNSGVSTYSMRCFA 206

Query: 399  458
           
Sbjct: 225  206

Query: 459  518
           
Sbjct: 285  206

Query: 519  578
           
Sbjct: 345  206

Query: 579  638
           
Sbjct: 405  206

Query: 639  651
           
Sbjct: 465  206

[Close]

BLAST of MU55717 vs. TrEMBL
Match: A0A067KYD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.4e-31
Identity = 82/165 (49.70%), Postives = 107/165 (64.85%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR VS++A+N YL +KIFP L+  PF+VVY+HTDV  +EN  GIS L++IYEAIPI +KN
Sbjct: 47  ARLVSNEALNNYLVEKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKN 106

Query: 279 NIEAVYFLHPSLQTRVF------------------FCHRRP---PHA*RRVSILPSSPKF 338
           N++AVYF+HP LQ+R+F                  F +R      H  RR  I    P F
Sbjct: 107 NLQAVYFVHPGLQSRLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHV-RRNEI--EIPDF 166

Query: 339 VYDHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
            YDHDE+LE+ P MD  LE+D+ RV+   PS++S VS+YSMRC A
Sbjct: 167 AYDHDEELEYRPTMDYGLESDHPRVYY-GPSMDSPVSSYSMRCIA 207

Query: 399  458
           
Sbjct: 227  207

Query: 459  518
           
Sbjct: 287  207

Query: 519  578
           
Sbjct: 347  207

Query: 579  638
           
Sbjct: 407  207

Query: 639  651
           
Sbjct: 467  207

[Close]

BLAST of MU55717 vs. TrEMBL
Match: B9R8H4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1599820 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-29
Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR VSS+A++ YL+DKI+P L+ GPF+VVY+HT+V  +EN  GIS L++IY+AIPI +KN
Sbjct: 45  ARLVSSEALHKYLEDKIYPKLEGGPFSVVYLHTNVQRSENFPGISALRSIYDAIPINVKN 104

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSILP-------SSPKFVYD 338
           N+EAVYF+HP++Q R+FF            + +  +  R   +           P+F YD
Sbjct: 105 NLEAVYFVHPAIQDRLFFATFGRLLFSGGLYGKLRYVSRLGFLWDHVRRNEFEIPQFAYD 164

Query: 339 HDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           H+E+LE+ P+ D  LE+D+ RV+  + S+++ VS YSMRC A
Sbjct: 165 HEEELEYRPITDYGLESDHPRVYCGN-SVDNPVSMYSMRCIA 205

Query: 399  458
           
Sbjct: 225  205

Query: 459  518
           
Sbjct: 285  205

Query: 519  578
           
Sbjct: 345  205

Query: 579  638
           
Sbjct: 405  205

Query: 639  651
           
Sbjct: 465  205

[Close]

BLAST of MU55717 vs. TrEMBL
Match: M0ZMQ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001579 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.9e-29
Identity = 72/163 (44.17%), Postives = 102/163 (62.58%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR +S + VN YL +KIFP L+  PF VVY+HTDV  +EN  G+S L++ Y+AIP+ ++ 
Sbjct: 39  ARNLSVEVVNKYLSEKIFPELEKRPFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRE 98

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           N+EAVYFLHP LQ R+F             + +  +   RV  L           P+FVY
Sbjct: 99  NLEAVYFLHPGLQARLFLATFGRFIFSGGLYGKLRYV-SRVDYLWEHVRRNEIGMPEFVY 158

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDE LE+ P+MD  LE+D+ RV+  +P+++S V+ YSMRC +
Sbjct: 159 DHDEDLEYRPMMDYGLESDHARVYGDAPAVDSPVTMYSMRCIS 200

Query: 399  458
           
Sbjct: 219  200

Query: 459  518
           
Sbjct: 279  200

Query: 519  578
           
Sbjct: 339  200

Query: 579  638
           
Sbjct: 399  200

Query: 639  651
           
Sbjct: 459  200

[Close]

BLAST of MU55717 vs. TrEMBL
Match: A0A0V0IF71_SOLCH (Putative ganglioside-induced differentiation-associated protein 2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-28
Identity = 72/163 (44.17%), Postives = 102/163 (62.58%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR +S + VN YL +KIFP L+  PF VVY+HTDV  +EN  G+S L++ Y+AIP+ ++ 
Sbjct: 39  ARNLSVEVVNKYLAEKIFPELEKRPFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRE 98

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           N+EAVYFLHP LQ R+F             + +  +   RV  L           P+FVY
Sbjct: 99  NLEAVYFLHPGLQARLFLATFGRFIFSGGLYGKLRYV-SRVDYLWEHVRRNEIGMPEFVY 158

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDE LE+ P+MD  LE+D+ RV+  +P+++S V+ YSMRC +
Sbjct: 159 DHDEDLEYRPMMDYGLESDHARVYGDAPAVDSPVTMYSMRCIS 200

Query: 399  458
           
Sbjct: 219  200

Query: 459  518
           
Sbjct: 279  200

Query: 519  578
           
Sbjct: 339  200

Query: 579  638
           
Sbjct: 399  200

Query: 639  651
           
Sbjct: 459  200

[Close]

BLAST of MU55717 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 70/162 (43.21%), Postives = 98/162 (60.49%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           ARF+S   +  YL++KIFP L   PF V+Y+HT V  +EN  GIS L+AIY+AIP+ +++
Sbjct: 42  ARFLSLDVLKKYLEEKIFPRLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRD 101

Query: 279 NIEAVYFLHPSLQTRVFF--CHR--------RPPHA*RRVSIL--------PSSPKFVYD 338
           N++ VYFLHP LQ+R+F   C R               RV  L           P+FVYD
Sbjct: 102 NLQEVYFLHPGLQSRLFLATCGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYD 161

Query: 339 HDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           HD+ LE+ P+MD   E+D+ RVF+   +++S VS++SMRC +
Sbjct: 162 HDDDLEYRPMMDYGQESDHARVFA-GAAVDSSVSSFSMRCIS 202

Query: 399  458
           
Sbjct: 222  202

Query: 459  518
           
Sbjct: 282  202

Query: 519  578
           
Sbjct: 342  202

Query: 579  638
           
Sbjct: 402  202

Query: 639  651
           
Sbjct: 462  202

[Close]

BLAST of MU55717 vs. NCBI nr
Match: gi|659089058|ref|XP_008445305.1| (PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 6.0e-62
Identity = 127/163 (77.91%), Postives = 131/163 (80.37%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENC GISNLKAIYEAIPITIKN
Sbjct: 44  ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKN 103

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           NIEAVYFLHPSLQTRVFF            + +  +  +RV  L           PKFVY
Sbjct: 104 NIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYV-KRVEFLWEHVRRKEMELPKFVY 163

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDEKLEF PVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 164 DHDEKLEFCPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 205

Query: 399  458
           
Sbjct: 224  205

Query: 459  518
           
Sbjct: 284  205

Query: 519  578
           
Sbjct: 344  205

Query: 579  638
           
Sbjct: 404  205

Query: 639  651
           
Sbjct: 464  205

[Close]

BLAST of MU55717 vs. NCBI nr
Match: gi|449450478|ref|XP_004142989.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 2.5e-60
Identity = 125/163 (76.69%), Postives = 130/163 (79.75%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTEN  GISNLKAIYEAIPITIKN
Sbjct: 45  ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKN 104

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           NIEAVYFLHPSLQTRVFF            + +  +  +RV  L           PKFVY
Sbjct: 105 NIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYV-KRVEFLWEHVRRKEMDLPKFVY 164

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDEKLEF PVM+SDLENDYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 165 DHDEKLEFCPVMESDLENDYLRVFSPSPSLNSGVSTYSMRCFA 206

Query: 399  458
           
Sbjct: 225  206

Query: 459  518
           
Sbjct: 285  206

Query: 519  578
           
Sbjct: 345  206

Query: 579  638
           
Sbjct: 405  206

Query: 639  651
           
Sbjct: 465  206

[Close]

BLAST of MU55717 vs. NCBI nr
Match: gi|470110088|ref|XP_004291319.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33
Identity = 75/163 (46.01%), Postives = 108/163 (66.26%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR VS +A+N YL++ IFP L++ PF++VY+HTDVH +EN  GIS L++IY+AIP  +KN
Sbjct: 45  ARSVSKEALNEYLRENIFPSLEEKPFSIVYVHTDVHRSENFPGISTLRSIYDAIPENVKN 104

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSIL--------PSSPKFVY 338
           N+EAV+F+HP LQ R+F             +++  +   R+  L           P+FVY
Sbjct: 105 NLEAVHFVHPGLQARLFLATFGRLLFTGGLYKKVNYV-TRLEFLWDQVRRNEMEIPEFVY 164

Query: 339 DHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           DHDE+LEF P+MD  +E+D+ RV+   P+++S VS YSMRC A
Sbjct: 165 DHDEELEFRPMMDYGIESDHPRVYGAPPAMDSSVSMYSMRCIA 206

Query: 399  458
           
Sbjct: 225  206

Query: 459  518
           
Sbjct: 285  206

Query: 519  578
           
Sbjct: 345  206

Query: 579  638
           
Sbjct: 405  206

Query: 639  651
           
Sbjct: 465  206

[Close]

BLAST of MU55717 vs. NCBI nr
Match: gi|802607266|ref|XP_012073707.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas])

HSP 1 Score: 146.7 bits (369), Expect = 4.9e-32
Identity = 82/165 (49.70%), Postives = 107/165 (64.85%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR VS++A+N YL +KIFP L+  PF+VVY+HTDV  +EN  GIS L++IYEAIPI +KN
Sbjct: 47  ARLVSNEALNNYLVEKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKN 106

Query: 279 NIEAVYFLHPSLQTRVF------------------FCHRRP---PHA*RRVSILPSSPKF 338
           N++AVYF+HP LQ+R+F                  F +R      H  RR  I    P F
Sbjct: 107 NLQAVYFVHPGLQSRLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHV-RRNEI--EIPDF 166

Query: 339 VYDHDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
            YDHDE+LE+ P MD  LE+D+ RV+   PS++S VS+YSMRC A
Sbjct: 167 AYDHDEELEYRPTMDYGLESDHPRVYY-GPSMDSPVSSYSMRCIA 207

Query: 399  458
           
Sbjct: 227  207

Query: 459  518
           
Sbjct: 287  207

Query: 519  578
           
Sbjct: 347  207

Query: 579  638
           
Sbjct: 407  207

Query: 639  651
           
Sbjct: 467  207

[Close]

BLAST of MU55717 vs. NCBI nr
Match: gi|720035115|ref|XP_010266934.1| (PREDICTED: protein GDAP2 homolog [Nelumbo nucifera])

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30
Identity = 73/162 (45.06%), Postives = 106/162 (65.43%), Query Frame = -3


Query: 219 ARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENCSGISNLKAIYEAIPITIKN 278
           AR VS++ +N YL++KIFP L + PF+VVY+HT+V  +EN  GIS L++IYEA+PI +K 
Sbjct: 42  ARIVSAEVLNKYLEEKIFPQLGERPFSVVYVHTNVQRSENFPGISTLRSIYEALPINVKE 101

Query: 279 NIEAVYFLHPSLQTRVFFC-----------HRRPPHA*RRVSILP-------SSPKFVYD 338
           N+EAVYF+HP LQ+R+F             + +  +  R   +           P FVYD
Sbjct: 102 NLEAVYFVHPGLQSRLFLATFGRFLFSGGLYGKLKYVSRLEFLWEHVRRNEIEIPDFVYD 161

Query: 339 HDEKLEFYPVMDSDLENDYLRVFSPSPSLNSGVSTYSMRCFA 398
           HDE+LE+ P+MD  LE+D+ RV+  +P+++S VS YSMRC +
Sbjct: 162 HDEELEYRPMMDYGLESDHPRVYG-APTVDSPVSMYSMRCIS 202

Query: 399  458
           
Sbjct: 222  202

Query: 459  518
           
Sbjct: 282  202

Query: 519  578
           
Sbjct: 342  202

Query: 579  638
           
Sbjct: 402  202

Query: 639  651
           
Sbjct: 462  202

The following BLAST results are available for this feature:

BLAST of MU55717 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LML6_CUCSA	4.3e-59	76.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1	[more]
A0A067KYD2_JATCU	8.4e-31	49.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1	[more]
B9R8H4_RICCO	6.1e-29	45.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1599820 PE=4 SV=1	[more]
M0ZMQ6_SOLTU	7.9e-29	44.17	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001579 PE=4 SV=1	[more]
A0A0V0IF71_SOLCH	1.0e-28	44.17	Putative ganglioside-induced differentiation-associated protein 2-like OS=Solanu...	[more]

BLAST of MU55717 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35750.1	1.2e-28	43.21	SEC14 cytosolic factor family protein / phosphoglyceride transfer fa...	[more]

BLAST of MU55717 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089058\|ref\|XP_008445305.1\|	6.0e-62	77.91	PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo]	[more]
gi\|449450478\|ref\|XP_004142989.1\|	2.5e-60	76.69	PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sat...	[more]
gi\|470110088\|ref\|XP_004291319.1\|	1.5e-33	46.01	PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragar...	[more]
gi\|802607266\|ref\|XP_012073707.1\|	4.9e-32	49.70	PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatrop...	[more]
gi\|720035115\|ref\|XP_010266934.1\|	1.6e-30	45.06	PREDICTED: protein GDAP2 homolog [Nelumbo nucifera]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011332	MELO3C011332	gene
MELO3C011331	MELO3C011331	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
46D13A09	46D13A09	EST