Cp4.1LG11g02800 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g02800
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCellular retinaldehyde-binding/triple function, C-terminal
LocationCp4.1LG11 : 1493384 .. 1494192 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGGTACTGACTTTCAAAACAGAGTGTGAGTGTGAGTGTGAGTGTGCTCTGTTTTACTTATGGTGATTGCTGTTTTGGTTTCAGCTCGGTTCGTGAGCACGCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGAACAACCTTAAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGTGCCGAGTAAGCATTCTTCCTCCCCTGAATTTGAACTTCCCATTGCTCAAAAAGCCAAAAAGACCATATCTTTATGGTGGGATTCTTTATTTGTTGACTTGCAGGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTATGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCCCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGA

mRNA sequence

ATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGCTCGGTTCGTGAGCACGCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGAACAACCTTAAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGTGCCGAGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTATGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCCCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGA

Coding sequence (CDS)

ATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGCTCGGTTCGTGAGCACGCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGAACAACCTTAAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGTGCCGAGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTATGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCCCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGA

Protein sequence

MNYSVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLRLFPASPSVDSAVSTYSSMRCFA
Homology
[Close]
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.9e-12
Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 1 

Query: 29  GRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFP 88
           G D  GR V ++VG++ P   +  +   LY    +   +    + LVY HT +    N P
Sbjct: 343 GVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYVLVYFHT-LTGEHNHP 402

Query: 89  GISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARL---FFATVGRLILGAELYNKVKYVKR 148
               LK +Y+ +    K NLKA+YFVHP  ++++   FF T       + L +KV  V+ 
Sbjct: 403 DSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTT----FTVSGLKDKVHQVES 462

Query: 149 VEFLWEYVRRKEIELPEFVYDHD--EKLEFCPMMDSGL 182
           +  L+  V  ++IE+P FV D+D  E   F P   S L
Sbjct: 463 LHQLFSAVPPEQIEIPPFVLDYDARENGPFFPSQSSFL 494

[Close]
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match: GDAP2_NEMVE (Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.3e-11
Identity = 45/147 (30.61%), Postives = 79/147 (53.74%), Query Frame = 1 

Query: 29  GRDRAGRNVFLIVGKHFPARFVST-QAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTE-N 88
           G D  GR V + V +HF A+     +AV  ++   +   + +  + +VY HT  H TE N
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYFIS--VLDRIVNRDYVVVYFHT--HSTEEN 405

Query: 89  FPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARL---FFATVGRLILGAELYNKVKYV 148
            P +S LK +Y  +    + NLKA Y VHP + AR+   FF T       + +  KV ++
Sbjct: 406 QPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTT----FTASSVKEKVHFL 465

Query: 149 KRVEFLWEYVRRKEIELPEFVYDHDEK 171
             V++L++++   ++++P +V ++D K
Sbjct: 466 SGVQYLYDWINPDQLDIPAYVLEYDMK 484

[Close]
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.3e-11
Identity = 51/163 (31.29%), Postives = 83/163 (50.92%), Query Frame = 1 

Query: 29  GRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFP 88
           G D  GR+V ++VG++ P   +  +   LY    +   +    + LVY HT +    N  
Sbjct: 343 GVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVTAKDYVLVYFHT-LTGEHNHL 402

Query: 89  GISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARL---FFATVGRLILGAELYNKVKYVKR 148
               LK +Y+ I    K NLKA+YFVHP  ++++   FF T       + L +KV  V+ 
Sbjct: 403 DSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTT----FTVSGLKDKVHQVES 462

Query: 149 VEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLRL 189
           +  L+  +  ++IE+P FV D+D + E  P+  S  +S +L L
Sbjct: 463 LHQLFTAIPPEQIEIPPFVLDYDAR-ENGPLFTS--QSSFLSL 496

[Close]
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 49/188 (26.06%), Postives = 89/188 (47.34%), Query Frame = 1 

Query: 13  SDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPF 72
           S+ L  +   +     G D  GR V ++VG++ P   +      LY    +   +    +
Sbjct: 329 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEY 388

Query: 73  TLVYIHTDVHWTENFPGISN--LKAIYEFIPTTIKNNLKAVYFVHPGLQARL---FFATV 132
            LVY HT    T ++  + +  LK +Y+ +    K NLKAVYFVHP  ++++   FF T 
Sbjct: 389 VLVYFHT---LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF 448

Query: 133 GRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLR 192
                 + L +K+ +V  ++ L+  +  ++I+ P FV ++D +       ++G    Y  
Sbjct: 449 S----VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-------ENG---PYFA 498

Query: 193 LFPASPSV 196
            +P SP +
Sbjct: 509 SYPPSPDL 498

[Close]
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 49/188 (26.06%), Postives = 88/188 (46.81%), Query Frame = 1 

Query: 13  SDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPF 72
           S+ L  +   +     G D  GR V ++VG++ P   +      LY    +   +    +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEY 387

Query: 73  TLVYIHTDVHWTENFPGISN--LKAIYEFIPTTIKNNLKAVYFVHPGLQARL---FFATV 132
            LVY HT    T  +  + +  LK +Y+ +    K NLKAVYFVHP  ++++   FF T 
Sbjct: 388 VLVYFHT---LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF 447

Query: 133 GRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLR 192
                 + L +K+ +V  ++ L+  +  ++I+ P FV ++D +       ++G    Y  
Sbjct: 448 S----VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-------ENG---PYFA 497

Query: 193 LFPASPSV 196
            +P SP +
Sbjct: 508 SYPPSPDL 497

[Close]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match: A0A0A0LML6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 8.2e-94
Identity = 170/206 (82.52%), Postives = 191/206 (92.72%), Query Frame = 1 

Query: 4   SVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKI 63
           S SSSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKI
Sbjct: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61

Query: 64  FPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLF 123
           FP LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIKNN++AVYF+HP LQ R+F
Sbjct: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121

Query: 124 FATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLES 183
           FATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE++LP+FVYDHDEKLEFCP+M+S LE+
Sbjct: 122 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN 181

Query: 184 DYLRLFPASPSVDSAVSTYSSMRCFA 210
           DYLR+F  SPS++S VSTY SMRCFA
Sbjct: 182 DYLRVFSPSPSLNSGVSTY-SMRCFA 206

[Close]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match: A0A067KYD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.4e-63
Identity = 123/209 (58.85%), Postives = 161/209 (77.03%), Query Frame = 1 

Query: 1   MNYSVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLK 60
           M+ S  ++  S SDQ HL+ K E+FK+ GRD+ GR V  ++GK FPAR VS +A+N YL 
Sbjct: 1   MSSSSPATLLSPSDQRHLIEKLEIFKIQGRDKRGRKVLRVIGKLFPARLVSNEALNNYLV 60

Query: 61  DKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQA 120
           +KIFP L+  PF++VY+HTDV  +ENFPGIS L++IYE IP  +KNNL+AVYFVHPGLQ+
Sbjct: 61  EKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKNNLQAVYFVHPGLQS 120

Query: 121 RLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSG 180
           RLF AT GRL+    LY K+K++ R+EFLW++VRR EIE+P+F YDHDE+LE+ P MD G
Sbjct: 121 RLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHVRRNEIEIPDFAYDHDEELEYRPTMDYG 180

Query: 181 LESDYLRLFPASPSVDSAVSTYSSMRCFA 210
           LESD+ R++   PS+DS VS+Y SMRC A
Sbjct: 181 LESDHPRVY-YGPSMDSPVSSY-SMRCIA 207

[Close]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match: A0A061FL29_THECC (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein OS=Theobroma cacao GN=TCM_034323 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.3e-62
Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 1 

Query: 1   MNYSVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLK 60
           MNY   S S    DQ HLL K +VFK+ GRD+ GR V LI+GKHFPAR VS++ +  YL+
Sbjct: 1   MNYCTLSES----DQEHLLEKLDVFKVKGRDKRGRQVLLIIGKHFPARMVSSEIIKKYLE 60

Query: 61  DKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQA 120
           DK++P L   PF+ VY+HTDV  +ENFPGIS L++IY+ IPT +K+NL+AVYF+HPGLQA
Sbjct: 61  DKVYPKLGAKPFSAVYVHTDVQRSENFPGISALRSIYDAIPTKVKDNLEAVYFLHPGLQA 120

Query: 121 RLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSG 180
           RLF AT GRL     LY K+KYV R+EFLW++VRR E+E+PEFV+DHDE+LE  P MD G
Sbjct: 121 RLFLATFGRLFFSGGLYAKLKYVSRLEFLWDHVRRMEMEIPEFVHDHDEELEHRPAMDYG 180

Query: 181 LESDYLRLFPASPSVDSAVSTYSSMRCFA 210
           LESD+ R++ A PSV     +  SMRC A
Sbjct: 181 LESDHPRIYSA-PSVPVDPISMYSMRCIA 204

[Close]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match: D7TV30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.3e-62
Identity = 119/202 (58.91%), Postives = 156/202 (77.23%), Query Frame = 1 

Query: 8   SSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFL 67
           + +S S+Q  L+ K E+FK+ GRD+ GR +  I+GK+FPAR +S   V  YL+DKIFP L
Sbjct: 3   AQASPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKL 62

Query: 68  KDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFATV 127
               F+++Y+HTDV  +ENFPGIS L++IYE IP  +K NL+AVYFVHPGLQ+RLF AT 
Sbjct: 63  GKKQFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATF 122

Query: 128 GRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLR 187
           GRL+LG  LY K++YV R++ LWE+VRR EIE+P+FVYDHDE+LE+ PMMD GLESD+ R
Sbjct: 123 GRLLLGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPR 182

Query: 188 LFPASPSVDSAVSTYSSMRCFA 210
           ++ A P+VDS VS Y SMRC +
Sbjct: 183 VYGA-PAVDSPVSMY-SMRCIS 202

[Close]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match: A0A0D2Q4U4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G120400 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.1e-61
Identity = 118/204 (57.84%), Postives = 158/204 (77.45%), Query Frame = 1 

Query: 6   SSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFP 65
           SS + S S Q HLL K +VFK+ GRD+ GRNV LI+GK+FPAR VS++ +  YL++ I+P
Sbjct: 6   SSFTLSQSQQQHLLEKLDVFKVKGRDKRGRNVLLIIGKYFPARMVSSEILKKYLEETIYP 65

Query: 66  FLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFA 125
            L   PF++VY+HTDV  +ENFPGIS L+++Y+ IP  +KNNL+ VYF+HPGLQARLF A
Sbjct: 66  KLGANPFSVVYVHTDVQKSENFPGISVLRSVYDAIPMNLKNNLEVVYFLHPGLQARLFLA 125

Query: 126 TVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDY 185
           T GRL     LY+K+KYV R+EFLW++VRR E+++P+FV+DHDE+LE+ PMMD GLESD+
Sbjct: 126 TFGRLFFDGGLYSKLKYVSRLEFLWDHVRRLEMKIPDFVHDHDEELEYHPMMDYGLESDH 185

Query: 186 LRLFPASPSVDSAVSTYSSMRCFA 210
            R++   PS+D  +S Y SMRC A
Sbjct: 186 PRVYTEPPSMD-PISMY-SMRCIA 207

[Close]
BLAST of Cp4.1LG11g02800 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 235.0 bits (598), Expect = 4.3e-62
Identity = 112/203 (55.17%), Postives = 152/203 (74.88%), Query Frame = 1 

Query: 7   SSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPF 66
           SS  S  +Q  L+ K E+FK+HGRD+ GR +  I+GK FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 67  LKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFAT 126
           L   PF ++Y+HT V  +ENFPGIS L+AIY+ IP  +++NL+ VYF+HPGLQ+RLF AT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 127 VGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYL 186
            GR +    LY K++Y+ RV++LWE+VRR EIE+PEFVYDHD+ LE+ PMMD G ESD+ 
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

Query: 187 RLFPASPSVDSAVSTYSSMRCFA 210
           R+F A  +VDS+VS++ SMRC +
Sbjct: 182 RVF-AGAAVDSSVSSF-SMRCIS 202

[Close]
BLAST of Cp4.1LG11g02800 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42
Identity = 79/166 (47.59%), Postives = 115/166 (69.28%), Query Frame = 1 

Query: 23  EVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVH 82
           + F L G DR+G  +F IVGK+FPAR VS + +  Y+  KI     +GP  LVY+H+ V 
Sbjct: 53  QFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMHSTVQ 112

Query: 83  WTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFATVGRLILGAELYNKVKY 142
             +N PGI+ L+ IYE +P+ IK+ L+ VYF+HPGL++RL  AT+GRL+L   LY K+KY
Sbjct: 113 KDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIKY 172

Query: 143 VKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLRL 189
           V R+++LWE +++ E+E+P+FV +HD  LE  P+ D G+E D  +L
Sbjct: 173 VSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQL 218

[Close]
BLAST of Cp4.1LG11g02800 vs. TAIR10
Match: AT1G69340.1 (AT1G69340.1 appr-1-p processing enzyme family protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 44/168 (26.19%), Postives = 89/168 (52.98%), Query Frame = 1 

Query: 3   YSVSSSSSSLSDQLHLLGKAEVFKLH--GRDRAGRNVFLIVGKHFPARFVSTQAVNLYLK 62
           YS+ S   + ++ ++L   AE+  ++  G D  G  V ++VG HF  R +  +   LY+ 
Sbjct: 376 YSLHSRYLAKANSINLSEIAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVI 435

Query: 63  DKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQA 122
            +  P ++  P+++VY H+        P +  +K + + +    + NL+A+Y +HP    
Sbjct: 436 KEFEPVIQK-PYSIVYFHSAASLQVQ-PDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHL 495

Query: 123 RLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHD 169
           +    T+ +  +   ++ KV Y  R+  L++YV R+++ +P+FV+ HD
Sbjct: 496 KATILTM-QFFVDNVVWKKVVYADRLLQLFKYVPREQLTIPDFVFQHD 540

[Close]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match: gi|449450478|ref|XP_004142989.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93
Identity = 170/206 (82.52%), Postives = 191/206 (92.72%), Query Frame = 1 

Query: 4   SVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKI 63
           S SSSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKI
Sbjct: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61

Query: 64  FPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLF 123
           FP LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIKNN++AVYF+HP LQ R+F
Sbjct: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121

Query: 124 FATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLES 183
           FATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE++LP+FVYDHDEKLEFCP+M+S LE+
Sbjct: 122 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN 181

Query: 184 DYLRLFPASPSVDSAVSTYSSMRCFA 210
           DYLR+F  SPS++S VSTY SMRCFA
Sbjct: 182 DYLRVFSPSPSLNSGVSTY-SMRCFA 206

[Close]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match: gi|659089058|ref|XP_008445305.1| (PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93
Identity = 170/203 (83.74%), Postives = 189/203 (93.10%), Query Frame = 1 

Query: 7   SSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPF 66
           SSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKIFP 
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 67  LKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFAT 126
           LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIKNN++AVYF+HP LQ R+FFAT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 127 VGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYL 186
           VGRL+L AELYNKVKYVKRVEFLWE+VRRKE+ELP+FVYDHDEKLEFCP+MDS LE+DYL
Sbjct: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183

Query: 187 RLFPASPSVDSAVSTYSSMRCFA 210
           R+F  SPS++S VSTY SMRCFA
Sbjct: 184 RVFSPSPSLNSGVSTY-SMRCFA 205

[Close]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match: gi|470110088|ref|XP_004291319.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-66
Identity = 125/203 (61.58%), Postives = 161/203 (79.31%), Query Frame = 1 

Query: 7   SSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPF 66
           S+  SLSDQ+ ++ K EVFK+ GRD+ GR V  I+G  FPAR VS +A+N YL++ IFP 
Sbjct: 5   SARLSLSDQMKVIEKLEVFKIQGRDKHGRKVLRIIGNSFPARSVSKEALNEYLRENIFPS 64

Query: 67  LKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFAT 126
           L++ PF++VY+HTDVH +ENFPGIS L++IY+ IP  +KNNL+AV+FVHPGLQARLF AT
Sbjct: 65  LEEKPFSIVYVHTDVHRSENFPGISTLRSIYDAIPENVKNNLEAVHFVHPGLQARLFLAT 124

Query: 127 VGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYL 186
            GRL+    LY KV YV R+EFLW+ VRR E+E+PEFVYDHDE+LEF PMMD G+ESD+ 
Sbjct: 125 FGRLLFTGGLYKKVNYVTRLEFLWDQVRRNEMEIPEFVYDHDEELEFRPMMDYGIESDHP 184

Query: 187 RLFPASPSVDSAVSTYSSMRCFA 210
           R++ A P++DS+VS Y SMRC A
Sbjct: 185 RVYGAPPAMDSSVSMY-SMRCIA 206

[Close]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match: gi|802607266|ref|XP_012073707.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas])

HSP 1 Score: 249.2 bits (635), Expect = 6.3e-63
Identity = 123/209 (58.85%), Postives = 161/209 (77.03%), Query Frame = 1 

Query: 1   MNYSVSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLK 60
           M+ S  ++  S SDQ HL+ K E+FK+ GRD+ GR V  ++GK FPAR VS +A+N YL 
Sbjct: 1   MSSSSPATLLSPSDQRHLIEKLEIFKIQGRDKRGRKVLRVIGKLFPARLVSNEALNNYLV 60

Query: 61  DKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQA 120
           +KIFP L+  PF++VY+HTDV  +ENFPGIS L++IYE IP  +KNNL+AVYFVHPGLQ+
Sbjct: 61  EKIFPKLEGEPFSVVYVHTDVQRSENFPGISALRSIYEAIPINVKNNLQAVYFVHPGLQS 120

Query: 121 RLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSG 180
           RLF AT GRL+    LY K+K++ R+EFLW++VRR EIE+P+F YDHDE+LE+ P MD G
Sbjct: 121 RLFLATFGRLLFSGGLYWKLKFLNRLEFLWDHVRRNEIEIPDFAYDHDEELEYRPTMDYG 180

Query: 181 LESDYLRLFPASPSVDSAVSTYSSMRCFA 210
           LESD+ R++   PS+DS VS+Y SMRC A
Sbjct: 181 LESDHPRVY-YGPSMDSPVSSY-SMRCIA 207

[Close]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match: gi|645228853|ref|XP_008221189.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Prunus mume])

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 125/204 (61.27%), Postives = 157/204 (76.96%), Query Frame = 1 

Query: 11  SLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDG 70
           SL+DQ HL+ K EVFK+ GRD+ GR V  IVGK FPAR VS +AVN YL++KIFP L + 
Sbjct: 16  SLTDQQHLVDKLEVFKIQGRDKHGRKVLRIVGKFFPARSVSNEAVNNYLEEKIFPNLGER 75

Query: 71  PFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFFATVGRL 130
           PF++VY+HTDV+ + NFPGISNL++IY+ IP T+K+ L+AVYFVHPGLQARLF AT GRL
Sbjct: 76  PFSVVYLHTDVNRSGNFPGISNLRSIYDAIPITLKDRLQAVYFVHPGLQARLFLATFGRL 135

Query: 131 ILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESDYLR--- 190
           +  + LY K+KYVKR+EFLW+ VRR E+E+PEFVYDHDE+LE+ PMMD GLESD+ R   
Sbjct: 136 LFKSGLYKKLKYVKRLEFLWDQVRRNEVEIPEFVYDHDEELEYRPMMDYGLESDHPRPRV 195

Query: 191 -LFPASPSVDSAVSTY-SSMRCFA 210
            + P + S     S +  SMRC A
Sbjct: 196 YVAPCTSSTSMMDSPFVYSMRCIA 219

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g02800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDAP2_XENTR3.9e-1232.28Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis P... [more]
GDAP2_NEMVE3.3e-1130.61Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1[more]
GDAP2_XENLA4.3e-1131.29Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 ... [more]
GDAP2_MOUSE1.2e-1026.06Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap... [more]
GDAP2_RAT1.6e-1026.06Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN... [more]
BLAST of Cp4.1LG11g02800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LML6_CUCSA8.2e-9482.52Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348170 PE=4 SV=1[more]
A0A067KYD2_JATCU4.4e-6358.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08150 PE=4 SV=1[more]
A0A061FL29_THECC8.3e-6258.85SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
D7TV30_VITVI8.3e-6258.91Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=... [more]
A0A0D2Q4U4_GOSRA3.1e-6157.84Uncharacterized protein OS=Gossypium raimondii GN=B456_002G120400 PE=4 SV=1[more]
BLAST of Cp4.1LG11g02800 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35750.14.3e-6255.17 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT3G10210.11.7e-4247.59 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT1G69340.13.1e-1226.19 appr-1-p processing enzyme family protein[more]
BLAST of Cp4.1LG11g02800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450478|ref|XP_004142989.1|1.2e-9382.52PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Cucumis sat... [more]
gi|659089058|ref|XP_008445305.1|1.2e-9383.74PREDICTED: uncharacterized protein LOC103488375 [Cucumis melo][more]
gi|470110088|ref|XP_004291319.1|2.1e-6661.58PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Fragar... [more]
gi|802607266|ref|XP_012073707.1|6.3e-6358.85PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatrop... [more]
gi|645228853|ref|XP_008221189.1|1.4e-6261.27PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Prunus... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g02800.1Cp4.1LG11g02800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 34..169
score: 1.7
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 18..167
score: 2.
IPR001251CRAL-TRIO lipid binding domainunknownSSF52087CRAL/TRIO domaincoord: 23..158
score: 1.3
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 1..207
score: 3.7
NoneNo IPR availablePANTHERPTHR11106:SF58SUBFAMILY NOT NAMEDcoord: 1..207
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g02800Cucsa.394110Cucumber (Gy14) v1cgycpeB1040
Cp4.1LG11g02800CmaCh05G003300Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g02800CmoCh05G003330Cucurbita moschata (Rifu)cmocpeB720
Cp4.1LG11g02800Cla022388Watermelon (97103) v1cpewmB101
Cp4.1LG11g02800Csa2G348170Cucumber (Chinese Long) v2cpecuB099
Cp4.1LG11g02800MELO3C011332Melon (DHL92) v3.5.1cpemeB089
Cp4.1LG11g02800ClCG08G013950Watermelon (Charleston Gray)cpewcgB125
Cp4.1LG11g02800CSPI02G16930Wild cucumber (PI 183967)cpecpiB096
Cp4.1LG11g02800Lsi08G012820Bottle gourd (USVL1VR-Ls)cpelsiB100
Cp4.1LG11g02800CsaV3_2G024530Cucumber (Chinese Long) v3cpecucB0109
Cp4.1LG11g02800CsGy2G016900Cucumber (Gy14) v2cgybcpeB165
Cp4.1LG11g02800Carg09382Silver-seed gourdcarcpeB0199
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g02800Wax gourdcpewgoB0142
Cp4.1LG11g02800Cucurbita pepo (Zucchini)cpecpeB146
Cp4.1LG11g02800Cucurbita maxima (Rimu)cmacpeB179
Cp4.1LG11g02800Cucurbita moschata (Rifu)cmocpeB154
Cp4.1LG11g02800Cucumber (Gy14) v2cgybcpeB897
Cp4.1LG11g02800Melon (DHL92) v3.6.1cpemedB112
Cp4.1LG11g02800Silver-seed gourdcarcpeB1352