MELO3C011124 (gene) Melon (DHL92) v3.5.1

NameMELO3C011124
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEarly nodulin 93
Locationchr3 : 26225008 .. 26226834 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATCCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGGATTCTTTTGTAATTCCCTCGCCGGCTGAAGAGCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGGTCTCTTACTTCTCTCTCGATTAACCTTTGTGTAGTTTGTTAGAATTTGGAATTCGTACTTAAGCAATGGAGTCTCGGTGTTTGCGTGATGGATTCGATCTTCTTCAGCTGCTGTATAACAATACTTACTCGTCACTGGTTAATTTGATTGGAAGAATTAGATAGAATCTGTCTCCATGTTTTCTTTCATTAAAATGAGTTTTTTTTTAAAAAAAAATTCCTAATTTATTTATTGTTGGGCATTCATTCTTATGATCGCTTTTCTCACTTTTATCTTCTTTTAGATTTGGCTTATTGACAAGCTTTTGTAGATAATTAATCGCATCATCTTTTGTGCCTTACATTAGTTAGCATTTGTATAATTTTTCAGAAGGTGTTCGTGCTGGTTTCAAGAACGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGGTATTAGATCTTACTTAATAAGCTATTGTTTTTGTAATTTTTTTTTTATGTCTGTTCTTTCTGTTTTGAGGTTTAAAGTTGCATATATTTGACCATATTAGTAGGTTGATCTTAATAAGTTATAAGAGGTATAAAGATAAATAGTTAGTATGCAAGATTCTGTTCTGTTGTTCACTAGGTCATGGGTAAGGCATAAAGCTTTCCTTCAATTTCATTGCATTGGATTGGGTAATGTCTTCGTAGTGTAGGTACTCTATATTTGCGCATTCCATGTAATTACTTGAGTGCACTTGTCAATTTTATGGATACTTGTATTTCAACTTCTCCCAAATATGATGCTTTCCCACTCTAGGTCTGCAGTTATGAGAAAATAAAGATATAGGCAGACGTAGAATATGATTCTTGGTCTCCATATGGTTGGTGTAGTAAGAAATGAACGATTAGTTTGGTCCTGGTGGGTTGTCGAAAGGCTATTTGGTTTATTTTCTTTAGGAGATCTTCTTTGGACATCAGATTTGGAATTGTTTGGGACTTGAATCCTTTTTTATAAAAACTTGTTTCCTTTGTTGAACAAAAAACTATAAGCTCTGTGGATTGCGGAGTATTAAACCACATTGCAGAGTATTTATACTTTTGGTCGTTTTAGTGGTTATGCCTGAAATATTGCAGAATTTAAACAGGAGAAATTTTAGAAAATTACCTTTTTGTGGTCGGCAAAGTGGTAAGTTTTGAAAAGAATTCTAATAGCAAGTGAAGAGTAAAGTCTTCGTCCCACTGCATTTTTTTATGTTTGTGTTTCTGCATTTGTGGATTTTTCTTTTAAGTTTGACATACTTTTCCTGCTTTATCATCAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCTAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGGTATAATGCTTTTATATAGAAACTTATTTCAAACTCAGAAAAGCCTAAAGAGTTAAAAGATTCTAGTTGTAGCAGAATAAAGTGAATGTACGAATGTGAACTCCTAGAAAGTATGAGCCCAATCCATTTGGCTGCCCTTCAGGGAAGTAAAAGAAAATAGTAAAAGTTATTATGGAAGTATCTACAAAAATAGGTCGTCTTAATTTGGTCTTACTTGTAGGAATTAACATTTTACTTTTAATTTGTGAACAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAATTAGAGAATGCCTTGAGACACCAAGGATCATAA

mRNA sequence

ATGGGCATCCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGGATTCTTTTGTAATTCCCTCGCCGGCTGAAGAGCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAACGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCTAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAATTAGAGAATGCCTTGAGACACCAAGGATCATAA

Coding sequence (CDS)

ATGGGCATCCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGGATTCTTTTGTAATTCCCTCGCCGGCTGAAGAGCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAACGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCTAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCTGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAATTAGAGAATGCCTTGAGACACCAAGGATCATAA

Protein sequence

MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS*
BLAST of MELO3C011124 vs. Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.1e-23
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query: 26  ERKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAAS 85
           ++K+A AKRC+ EGV AG K A +A VASA+PTL +VR++PWA+ANLN+TAQALIIS A+
Sbjct: 17  DQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTAT 76

Query: 86  IAAYFITADKTILECARRNS 106
            AAYFI ADKT+L  AR+NS
Sbjct: 77  AAAYFIVADKTVLATARKNS 96

BLAST of MELO3C011124 vs. TrEMBL
Match: A0A0A0LPQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372870 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.1e-54
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WVHRR+SFVIPSPAE+RKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE+ALR QGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 116

BLAST of MELO3C011124 vs. TrEMBL
Match: G7I281_MEDTR (Early nodulin 93 OS=Medicago truncatula GN=MTR_1g007360 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-44
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WV +R+SF+I SP EERKI   K+CT EGVRAGFK A++ACV S VPTL 
Sbjct: 1   MGIPSELRDAWVSKRNSFIIASPDEERKILRTKKCTNEGVRAGFKAAAVACVVSTVPTLA 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRH 114
           AVR+VPWAKANLNYTAQALIISAASIAAYFITADKTILECAR+N+QLEN+LRH
Sbjct: 61  AVRMVPWAKANLNYTAQALIISAASIAAYFITADKTILECARKNAQLENSLRH 113

BLAST of MELO3C011124 vs. TrEMBL
Match: V7CX51_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G074600g PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-42
Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD+ +  +    + SPAEERKI   K+CT EGVRAGFK ASIACVASAVPTL 
Sbjct: 1   MGIPSELRDILLPNKKGVFVASPAEERKILRTKQCTSEGVRAGFKAASIACVASAVPTLT 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQ 115
           AVRV+PWAKANLNYTAQALIISAASIAAYFITADKTILECAR+N+QLE+ALRH+
Sbjct: 61  AVRVIPWAKANLNYTAQALIISAASIAAYFITADKTILECARKNAQLEDALRHK 114

BLAST of MELO3C011124 vs. TrEMBL
Match: I3S6T4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-40
Identity = 84/114 (73.68%), Postives = 102/114 (89.47%), Query Frame = 1

Query: 1   MGIPSELRDLWVHR-RDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTL 60
           MGIPSELRD+WV + +  F+I SPAEE K+  +K+CT EGVRAGFK A+IACV+SAVPTL
Sbjct: 1   MGIPSELRDMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTL 60

Query: 61  VAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRH 114
            AVR++PWAKANLNYTAQALIISAASIA+YFI ADKTILECAR+N++L+++LRH
Sbjct: 61  AAVRIIPWAKANLNYTAQALIISAASIASYFIAADKTILECARKNARLQDSLRH 114

BLAST of MELO3C011124 vs. TrEMBL
Match: I3S983_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.9e-40
Identity = 85/117 (72.65%), Postives = 102/117 (87.18%), Query Frame = 1

Query: 1   MGIPSELRDLWVHR-RDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTL 60
           MGIPSELRDLWV + +  F+I SPAEE K+  +K+CT EGVRAG K A+IACVASAVPTL
Sbjct: 1   MGIPSELRDLWVSKTKTPFLIASPAEESKLLRSKQCTNEGVRAGLKAATIACVASAVPTL 60

Query: 61  VAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 117
            AVR++PWAKANLNYTAQALIISAASIA+YFI ADKTILECAR+N++L+++LRH  +
Sbjct: 61  AAVRMIPWAKANLNYTAQALIISAASIASYFIVADKTILECARKNARLQDSLRHDNT 117

BLAST of MELO3C011124 vs. TAIR10
Match: AT5G25940.1 (AT5G25940.1 early nodulin-related)

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-26
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 1

Query: 14  RRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLN 73
           +++ FVI SP E  KI  A+   Q G  AG K A++A VASA+PT+ AVR+ PWAKANLN
Sbjct: 12  QQNLFVIASPDEIAKIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPWAKANLN 71

Query: 74  YTAQALIISAASIAAYFITADKTILECARRNSQLE 109
           YTAQALIIS+ASIAA+FITADKTIL+ ARRN++ +
Sbjct: 72  YTAQALIISSASIAAFFITADKTILQGARRNTEAQ 106

BLAST of MELO3C011124 vs. NCBI nr
Match: gi|659088445|ref|XP_008444985.1| (PREDICTED: early nodulin-93-like [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-57
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 116

BLAST of MELO3C011124 vs. NCBI nr
Match: gi|449461339|ref|XP_004148399.1| (PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.0e-54
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WVHRR+SFVIPSPAE+RKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE+ALR QGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 116

BLAST of MELO3C011124 vs. NCBI nr
Match: gi|1021531042|ref|XP_016162475.1| (PREDICTED: early nodulin-93-like [Arachis ipaensis])

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44
Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD+WV RR+SF+I SPAEERKI   K+CT EGV AGFK AS+ACVASAVPTL 
Sbjct: 1   MGIPSELRDMWVSRRESFLIASPAEERKIVRTKKCTHEGVIAGFKAASVACVASAVPTLA 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRH 114
           AVR+VPWAKANLNY AQALIISAASIAAYFITADKTILECARRN+QLE++LR+
Sbjct: 61  AVRMVPWAKANLNYVAQALIISAASIAAYFITADKTILECARRNAQLEDSLRN 113

BLAST of MELO3C011124 vs. NCBI nr
Match: gi|357436345|ref|XP_003588448.1| (early nodulin 93 [Medicago truncatula])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WV +R+SF+I SP EERKI   K+CT EGVRAGFK A++ACV S VPTL 
Sbjct: 1   MGIPSELRDAWVSKRNSFIIASPDEERKILRTKKCTNEGVRAGFKAAAVACVVSTVPTLA 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRH 114
           AVR+VPWAKANLNYTAQALIISAASIAAYFITADKTILECAR+N+QLEN+LRH
Sbjct: 61  AVRMVPWAKANLNYTAQALIISAASIAAYFITADKTILECARKNAQLENSLRH 113

BLAST of MELO3C011124 vs. NCBI nr
Match: gi|1012195795|ref|XP_015971810.1| (PREDICTED: early nodulin-93-like [Arachis duranensis])

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 1

Query: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD+WV RR+SF+I SPAEERKI   K+CT +GV AGFK ASIACVASAVPTL 
Sbjct: 1   MGIPSELRDMWVSRRESFLIASPAEERKIVRTKKCTHDGVIAGFKAASIACVASAVPTLA 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRH 114
           AVR+VPWAKANLNY AQALIISAASIAAYFITADKTILECARRN+QLE++LR+
Sbjct: 61  AVRMVPWAKANLNYVAQALIISAASIAAYFITADKTILECARRNAQLEDSLRN 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NO93_SOYBN6.1e-2366.25Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LPQ5_CUCSA2.1e-5495.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372870 PE=4 SV=1[more]
G7I281_MEDTR1.1e-4480.53Early nodulin 93 OS=Medicago truncatula GN=MTR_1g007360 PE=2 SV=1[more]
V7CX51_PHAVU1.8e-4278.95Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G074600g PE=4 SV=1[more]
I3S6T4_LOTJA1.7e-4073.68Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
I3S983_LOTJA2.9e-4072.65Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G25940.13.7e-2663.16 early nodulin-related[more]
Match NameE-valueIdentityDescription
gi|659088445|ref|XP_008444985.1|2.2e-57100.00PREDICTED: early nodulin-93-like [Cucumis melo][more]
gi|449461339|ref|XP_004148399.1|3.0e-5495.69PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus][more]
gi|1021531042|ref|XP_016162475.1|1.3e-4482.30PREDICTED: early nodulin-93-like [Arachis ipaensis][more]
gi|357436345|ref|XP_003588448.1|1.6e-4480.53early nodulin 93 [Medicago truncatula][more]
gi|1012195795|ref|XP_015971810.1|2.1e-4482.30PREDICTED: early nodulin-93-like [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005050Enod93
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009723 response to ethylene
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47808melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011124T1MELO3C011124T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47808MU47808transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005050Early nodulin 93 ENOD93 proteinPRODOMPD064786coord: 22..105
score: 5.0
IPR005050Early nodulin 93 ENOD93 proteinPFAMPF03386ENOD93coord: 28..105
score: 5.9
NoneNo IPR availablePANTHERPTHR33605FAMILY NOT NAMEDcoord: 12..116
score: 2.5
NoneNo IPR availablePANTHERPTHR33605:SF3EARLY NODULIN-RELATED PROTEINcoord: 12..116
score: 2.5

The following gene(s) are paralogous to this gene:

None