CsaV3_2G030650 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G030650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionearly nodulin-93-like
Locationchr2 : 20169404 .. 20171244 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGGTCTCTTACTTCTCTCTCGATTAACCTTTGTGTAGTTTCTTAGAATTTGGAGTTCGTGTTTAAGCAGTGGAGACTCGGTGTTAGCGCGATGGATTCGATCTTCTTTAGCTGCTGTGTAAAAATACTAACTCGTCACTGGTTAATTTGTAGGAAGAATTAGATAGAATATGCCTCCATGTTTTGTTTCATTATAATGAGATTTCTTTTTTTTTTTTTTTTTGTTGAGAAATTCCTAATTTATTTATTGTTGGGCATTCGTTCTTATGATCGTTTTTCTCACTTTTATCTTCTTTTAGATTTGGCTTATTGAGATGCTTTTGTAGATAATTAATCGCATCATCTTTTGTGCCTTACATTAGTTAGCGTTTGTATAATTTTTCAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGGTATTTTTTGTCTGTTTTGATGTCTGTTCTTTCTGTATTGTGGTTTAAAGTTACATACATTTGACCATATTAGTAGGTTGTCGTTAATAAGTTATAAGATGTATGAAGATAAATAATTAGTATGCAAGATTCTGTTCTATTGTTCATCAGGTCATGGGTAAGGCGTAAAGCTTTCCTTCAATTTCATTGCATTGGATTGTGTAATGTCTTCGTAGTGTAGGTATTCTATATTGGCACATTCCATGTAATTACTTGAGTGCGCTTGTCAAATTTATGGATACTTGTATTTTAACTTCTCCCAAATACGATGCCTTCCCACTCTAGGTCTGCAGTTATGTGAAAATAAAGTTATAGGCAGACGTAGAATATGAATTGGTCTCCATATAGTTGATGTAGTAAGAAATGCCCTATTAGTTTGGTGCTGGTGGGTTGCCGAAAGGCTATTTGGTTTTATTTTCTTTAGGAAATCTTCTCAGGACATCACATTTGAAATTGCTTGGGGCTTGAATATATTTTTATAAAAACTTGTTTCCCCAATGTTTAGTTGAACAAAAAATTATAAGCTCTGTGGATTGCAGAGTATTAAACCACATTGCAGCATATTTATACTTTTGGCGCTTTTTTTGGTTATATCTGAAATATTGCAGAATTTAAATAGGAGAAATTTTAGACACCTTTTCGTGGTCGGCAAAGTGATCAGTTTTGAAAAGAATTCTAATAGCAAGTGAAGAGTAAAGTCTTAGTCCCACTGTATTTTTTTGTGTTTGTGTGTTTGTGAATTTTTGTTTTAAGTTTGACACACTTCTTCTCCTGCTTTATCATCAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGGTATAATGCTTTTATATAGAAACTTATTTCGATGAATCAATTGCCTTTGTCACATTTGTTTCAAACTCAGAAAAGCCTAAAGAGTTAAAAGATTCTAGTTGTAGCAGAATAAAGTGAATGCAAAAATGTCAACTCCTAGAAAGTATGAGCCCATTCCATTTGGCTGCCCTCTAGGGAAGTAAAAGAAAATAGTAATAGGTATTATGGAAGTATCTACAAAAAAGGTCGTCTTAACTTGGTCCTACTTGTAGGAATTAACATTTTACTTTTAATTGGTGAACAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

mRNA sequence

ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

Coding sequence (CDS)

ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

Protein sequence

MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_004148399.1 (PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus] >KGN62792.1 hypothetical protein Csa_2G372870 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 116

BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_016900081.1 (PREDICTED: early nodulin-93-like [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WVHRR+SFVIPSPAE+RKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE+ALR QGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 116

BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_023546668.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 6.0e-51
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPS+LRD WV RRN+ VIPSPAE+RKI+NAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSDLRDLWVERRNALVIPSPAEERKISNAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE ALRRQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEHALRRQGS 116

BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_022996859.1 (early nodulin-93-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPS+LRD WV RRN+ VIPSPAE+RKI+NAK CTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSDLRDLWVERRNALVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE ALRRQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEHALRRQGS 116

BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_022961692.1 (early nodulin-93-like [Cucurbita moschata])

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-49
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPS+LRD WV RRN+ VIPSPAE+RKI+NAK CTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSDLRDLWVERRNAPVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE ALRRQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEHALRRQGS 116

BLAST of CsaV3_2G030650 vs. TAIR10
Match: AT5G25940.1 (early nodulin-related)

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17
Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 14  RRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLN 73
           ++N FVI SP E  KI  A+   Q G                  T+ AVR+ PWAKANLN
Sbjct: 12  QQNLFVIASPDEIAKIHRAETSKQAGAIXXXXXXXXXXXXXXXXTVAAVRMFPWAKANLN 71

Query: 74  YTAQALIISAASIAAYFITADKTILECARRNSQLE 109
           YTAQALIIS+ASIAA+FITADKTIL+ ARRN++ +
Sbjct: 72  YTAQALIISSASIAAFFITADKTILQGARRNTEAQ 106

BLAST of CsaV3_2G030650 vs. Swiss-Prot
Match: sp|Q02921|NO93_SOYBN (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.9e-22
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0

Query: 26  DRKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAAS 85
           D+K+A AKRC+ EGV AG K A +A VASA+PTL +VR++PWA+ANLN+TAQALIIS A+
Sbjct: 17  DQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTAT 76

Query: 86  IAAYFITADKTILECARRNS 106
            AAYFI ADKT+L  AR+NS
Sbjct: 77  AAAYFIVADKTVLATARKNS 96

BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A0A0LPQ5|A0A0A0LPQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372870 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.1e-56
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 116

BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A1S4DVR9|A0A1S4DVR9_CUCME (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103488164 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.2e-53
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD WVHRR+SFVIPSPAE+RKIANAKRCTQEGVRAGFKNASIACVASAVPTLV
Sbjct: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS 117
           AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE+ALR QGS
Sbjct: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLENALRHQGS 116

BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2I4GNL3|A0A2I4GNL3_9ROSI (early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109009466 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-43
Identity = 92/114 (80.70%), Postives = 104/114 (91.23%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIP E+RD+WV++RN F+I SP E++KI NA+ CT EGVRAGF+ ASIACVASAVPTLV
Sbjct: 1   MGIPLEMRDAWVNKRNGFLIASPVEEQKILNARNCTNEGVRAGFRAASIACVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQ 115
           AVR++PWAK NLNYTAQALIISAASIAAYFITADKTILECARRNS+LEDALR Q
Sbjct: 61  AVRLIPWAKRNLNYTAQALIISAASIAAYFITADKTILECARRNSRLEDALRHQ 114

BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2N9H160|A0A2N9H160_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33425 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.0e-43
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSE+RD WV +RNSFVI SP ED+K  NAK CTQE VR GFKNA+IA VASAVPTLV
Sbjct: 1   MGIPSEMRDIWVKKRNSFVIASPLEDQKALNAKICTQESVREGFKNATIAGVASAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQ 115
           AVRV PWAKANLNYTAQALIISAASIAA+FITADKT LECARRNSQLED LRRQ
Sbjct: 61  AVRVFPWAKANLNYTAQALIISAASIAAFFITADKTTLECARRNSQLEDTLRRQ 114

BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2I4G0Z5|A0A2I4G0Z5_9ROSI (early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109003740 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 95/114 (83.33%), Postives = 99/114 (86.84%), Query Frame = 0

Query: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLV 60
           MGIPSELRD W  +R SF+I SP EDRKI  A+ CT EGVRAGFK ASIA V SAVPTLV
Sbjct: 1   MGIPSELRDIWAKKRQSFLIASPVEDRKILKARHCTNEGVRAGFKAASIAGVVSAVPTLV 60

Query: 61  AVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQ 115
           AVRV+PWAKANLNYTAQALIISAASIAAYFITADKTIL CARRNSQLEDALR Q
Sbjct: 61  AVRVIPWAKANLNYTAQALIISAASIAAYFITADKTILACARRNSQLEDALRHQ 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004148399.11.4e-55100.00PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus] >KGN62792.1 hypoth... [more]
XP_016900081.11.1e-5295.69PREDICTED: early nodulin-93-like [Cucumis melo][more]
XP_023546668.16.0e-5193.10early nodulin-93-like [Cucurbita pepo subsp. pepo][more]
XP_022996859.13.9e-5092.24early nodulin-93-like [Cucurbita maxima][more]
XP_022961692.11.1e-4992.24early nodulin-93-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G25940.11.1e-1753.68early nodulin-related[more]
Match NameE-valueIdentityDescription
sp|Q02921|NO93_SOYBN8.9e-2267.50Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LPQ5|A0A0A0LPQ5_CUCSA9.1e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372870 PE=4 SV=1[more]
tr|A0A1S4DVR9|A0A1S4DVR9_CUCME7.2e-5395.69early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103488164 PE=4 SV=1[more]
tr|A0A2I4GNL3|A0A2I4GNL3_9ROSI1.4e-4380.70early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109009466 PE=4 SV=1[more]
tr|A0A2N9H160|A0A2N9H160_FAGSY4.0e-4384.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33425 PE=4 SV=1[more]
tr|A0A2I4G0Z5|A0A2I4G0Z5_9ROSI1.2e-4283.33early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109003740 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005050Enod93
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009723 response to ethylene
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G030650.1CsaV3_2G030650.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005050Early nodulin 93 ENOD93 proteinPFAMPF03386ENOD93coord: 28..105
e-value: 6.1E-41
score: 138.1
IPR005050Early nodulin 93 ENOD93 proteinPANTHERPTHR33605FAMILY NOT NAMEDcoord: 1..108
IPR005050Early nodulin 93 ENOD93 proteinPRODOMPD064786coord: 22..105
e-value: 1.0E-21
score: 249.0
NoneNo IPR availablePANTHERPTHR33605:SF3EARLY NODULIN-RELATED PROTEINcoord: 1..108

The following gene(s) are paralogous to this gene:

None