CsaV3_2G030650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGGTCTCTTACTTCTCTCTCGATTAACCTTTGTGTAGTTTCTTAGAATTTGGAGTTCGTGTTTAAGCAGTGGAGACTCGGTGTTAGCGCGATGGATTCGATCTTCTTTAGCTGCTGTGTAAAAATACTAACTCGTCACTGGTTAATTTGTAGGAAGAATTAGATAGAATATGCCTCCATGTTTTGTTTCATTATAATGAGATTTCTTTTTTTTTTTTTTTTTGTTGAGAAATTCCTAATTTATTTATTGTTGGGCATTCGTTCTTATGATCGTTTTTCTCACTTTTATCTTCTTTTAGATTTGGCTTATTGAGATGCTTTTGTAGATAATTAATCGCATCATCTTTTGTGCCTTACATTAGTTAGCGTTTGTATAATTTTTCAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGGTATTTTTTGTCTGTTTTGATGTCTGTTCTTTCTGTATTGTGGTTTAAAGTTACATACATTTGACCATATTAGTAGGTTGTCGTTAATAAGTTATAAGATGTATGAAGATAAATAATTAGTATGCAAGATTCTGTTCTATTGTTCATCAGGTCATGGGTAAGGCGTAAAGCTTTCCTTCAATTTCATTGCATTGGATTGTGTAATGTCTTCGTAGTGTAGGTATTCTATATTGGCACATTCCATGTAATTACTTGAGTGCGCTTGTCAAATTTATGGATACTTGTATTTTAACTTCTCCCAAATACGATGCCTTCCCACTCTAGGTCTGCAGTTATGTGAAAATAAAGTTATAGGCAGACGTAGAATATGAATTGGTCTCCATATAGTTGATGTAGTAAGAAATGCCCTATTAGTTTGGTGCTGGTGGGTTGCCGAAAGGCTATTTGGTTTTATTTTCTTTAGGAAATCTTCTCAGGACATCACATTTGAAATTGCTTGGGGCTTGAATATATTTTTATAAAAACTTGTTTCCCCAATGTTTAGTTGAACAAAAAATTATAAGCTCTGTGGATTGCAGAGTATTAAACCACATTGCAGCATATTTATACTTTTGGCGCTTTTTTTGGTTATATCTGAAATATTGCAGAATTTAAATAGGAGAAATTTTAGACACCTTTTCGTGGTCGGCAAAGTGATCAGTTTTGAAAAGAATTCTAATAGCAAGTGAAGAGTAAAGTCTTAGTCCCACTGTATTTTTTTGTGTTTGTGTGTTTGTGAATTTTTGTTTTAAGTTTGACACACTTCTTCTCCTGCTTTATCATCAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGGTATAATGCTTTTATATAGAAACTTATTTCGATGAATCAATTGCCTTTGTCACATTTGTTTCAAACTCAGAAAAGCCTAAAGAGTTAAAAGATTCTAGTTGTAGCAGAATAAAGTGAATGCAAAAATGTCAACTCCTAGAAAGTATGAGCCCATTCCATTTGGCTGCCCTCTAGGGAAGTAAAAGAAAATAGTAATAGGTATTATGGAAGTATCTACAAAAAAGGTCGTCTTAACTTGGTCCTACTTGTAGGAATTAACATTTTACTTTTAATTGGTGAACAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA ATGGGAATCCCATCGGAATTGAGGGATTCGTGGGTGCACAGAAGGAATTCTTTTGTAATTCCCTCGCCGGCTGAAGATCGGAAAATCGCGAACGCCAAGCGATGTACTCAAGAAGGCGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTACCTACGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTCATCATTTCCGCAGCATCAATAGCTGCCTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPTLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_004148399.1 (PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus] >KGN62792.1 hypothetical protein Csa_2G372870 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_016900081.1 (PREDICTED: early nodulin-93-like [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_023546668.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.5 bits (532), Expect = 6.0e-51 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_022996859.1 (early nodulin-93-like [Cucurbita maxima]) HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. NCBI nr
Match: XP_022961692.1 (early nodulin-93-like [Cucurbita moschata]) HSP 1 Score: 205.3 bits (521), Expect = 1.1e-49 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TAIR10
Match: AT5G25940.1 (early nodulin-related) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17 Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. Swiss-Prot
Match: sp|Q02921|NO93_SOYBN (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 8.9e-22 Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A0A0LPQ5|A0A0A0LPQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372870 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 9.1e-56 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A1S4DVR9|A0A1S4DVR9_CUCME (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103488164 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.2e-53 Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2I4GNL3|A0A2I4GNL3_9ROSI (early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109009466 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-43 Identity = 92/114 (80.70%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2N9H160|A0A2N9H160_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33425 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.0e-43 Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of CsaV3_2G030650 vs. TrEMBL
Match: tr|A0A2I4G0Z5|A0A2I4G0Z5_9ROSI (early nodulin-93-like OS=Juglans regia OX=51240 GN=LOC109003740 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42 Identity = 95/114 (83.33%), Postives = 99/114 (86.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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