Lsi08G010630 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G010630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Early nodulin 93
Location	chr08 : 19248461 .. 19250750 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAAATCATCACTAATATGTCAACAATGAAAAGAAAGATCAAACTTTCGATATCTGTTTAGAAAGAAAAAATCATGTAAATTATAATTGAGCTGAGCTCGTGTTATTTTATTTATATATGATTCTAAAAAAGGTATATAATAGATGTATGAAAATGAAATGATGCGGCGAAAAGGTTTATACATTTCTTAATTTGACCTTAAAAAAAATTAAACATGAAAAGGAATAAGAATAATAAACAGGCAGCGTCGATGATGAGGAGGCGAAAGCAAATTTTGATTGGTTATCTTCCAATTAAAAAATGAAAAAAGAAAAGCCCGGTTTGAAGGATTCAGCGGCAAATAAATTAAGATGGATTCATGAACTTTGAACAGAATCGATCTATTCAACTTCTCTAAATTTTCCGATTTGGTTTCTGACGACGACCAATGGGAATTCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGAATCCTATTGTAATTCCCTCGCCGGCTGAAGAACGGAAAATCTCGAACGCCAAACTTTGCACTCAAGGTCTGTTACTTCGCTCGCTTTCAATTCATTGATCAATCGTTTCTTGAGCTTTGTGTAGCTTGTTAGAATTTGAAATTCGTATTATGGAATCTCGATGTTAGCGCAATGGATTCGATCTCCTTTAGCTGCTGTACAGTACTGACTCGTCACTGGATAACTTGTAGGAAGAATTAGAAAGAGTCTGCCTCCGTGCGTTGTTTCATTATAATGAGAATTGTTGGAGAAATTCCTAATTTATTTATTGCTGGGCATTCATTCCCATGATCGCTTCTCTAACCTTCTATCTTCTTTTAGATTTGGCTTATTTACATGTTTTAGTAGATAATTAATCGCATCATCTTTTTTTACCTTACATTAGTTAGCCTTTGTATAATTTTCAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTGCCTACGGTATTCGATCTGACTTAATAAACTGTGGTTTTAGTCTGTGTTGATGTCTATTCTTTCTGTATTGTGGTTTAAAGTTGCATAAATTTGACCATATTAGTAGGTTGATCAATTAATAAGAGGCATAAGATAAACAATTAGTATGCAATATTCTGATCATCAGGTCATGGGTAAAGCGTAAAGCTTTCCTCCAATTACATTGCGATGGATTAAGTAATGTATTCGTAGTGTAGGTACTCTATGTTGGCCCATTCCATGTAATTACTTGAGTGCACTTGTCAATTTTATGGATACATATGTTTCAACTTCTCCCAAATCTGATGCTTTCCCACTCTAGGTCTGCAGTTATGTGAAGTAAAGAAATAGGCAGAAGTAGAATATGATTATTGGTCTCCATATGGTAGATGTAGTAAGAAAAGCAATATTATTTTGGTGCTGGTGGGTTGACGAAAGACTATTCGGTTTTATTTTCATAAGGAGATCTTCTTTCGACATCACATTAAGAATTTTCTGGGGCTTGAATCTTTTTTAATAAAAACTTGTTTTCCCGTTGTTTAGTTGAACAGAACACCATAAGCTATGTGTGCAGAGTATTAAACCACATTATTTGTCCCTTGTGCTATTTGGTGGTTTCTAGTGGTTATGCCTAAAATATTGCAGAATTTGAATAGGAGAAAATTTGGAAAATCACTTTGTGTGGTCAACAAGGTAGTAAGTTTTGAAGAGAACTCTATTAGCAAGTGAAAAGTTAAGTCTTAGTCTCACTGCATTTTTGGTGTGTGTGTGTGTGTCTCTGTGTGTGAATTTTTGTTTTAAGTTTAACATACTTTTTCTCCTACTTCTTCGTCAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTTATCATTTCTGCAGGTATATAATGCTTTTATATAGAAACTTGTTGTTATTAAACAATTGTCATCATCTATTTCAAACACGAAAAAGGCCTAAAGAGTTGAAAGATTCTAGTTGTAGCAGAATAAAGTGAATGTAAAACTGAACTTCTAGAAAGTATGAGCCCATCCCATTTGCCTGCCATCTAGGGAAGTAAAAGAAAATAGTAAAATGTAGTATGGAAGCATCTATAGAAATAGGTCAAATTATTTTGGTATAAATTCTTGTAGGAATTAACATTTTACTTTTAATCGGTGAACAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

mRNA sequence

GATGAAATCATCACTAATATGTCAACAATGAAAAGAAAGATCAAACTTTCGATATCTGTTTAGAAAGAAAAAATCATGTAAATTATAATTGAGCTGAGCTCGTGTTATTTTATTTATATATGATTCTAAAAAAGGTATATAATAGATGTATGAAAATGAAATGATGCGGCGAAAAGGTTTATACATTTCTTAATTTGACCTTAAAAAAAATTAAACATGAAAAGGAATAAGAATAATAAACAGGCAGCGTCGATGATGAGGAGGCGAAAGCAAATTTTGATTGGTTATCTTCCAATTAAAAAATGAAAAAAGAAAAGCCCGGTTTGAAGGATTCAGCGGCAAATAAATTAAGATGGATTCATGAACTTTGAACAGAATCGATCTATTCAACTTCTCTAAATTTTCCGATTTGGTTTCTGACGACGACCAATGGGAATTCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGAATCCTATTGTAATTCCCTCGCCGGCTGAAGAACGGAAAATCTCGAACGCCAAACTTTGCACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTGCCTACGAATTTGAATAGGAGAAAATTTGGAAAATCACTTTGTGTGGTCAACAAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTTATCATTTCTGCAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

Coding sequence (CDS)

ATGGGAATTCCATCGGAATTGAGGGATTTGTGGGTGCACAGAAGGAATCCTATTGTAATTCCCTCGCCGGCTGAAGAACGGAAAATCTCGAACGCCAAACTTTGCACTCAAGAAGGTGTTCGTGCTGGTTTCAAGAATGCTTCTATTGCATGTGTTGCCAGTGCAGTGCCTACGAATTTGAATAGGAGAAAATTTGGAAAATCACTTTGTGTGGTCAACAAGTTGGTTGCTGTTCGAGTAGTTCCTTGGGCCAAAGCAAACCTTAATTATACTGCTCAGGCACTTATCATTTCTGCAGCGTCTATTGCTGCGTACTTCATCACTGCTGATAAAACCATCTTAGAATGTGCAAGAAGAAACTCTCAGTTAGAGGATGCCTTGAGACGCCAAGGATCATAA

Protein sequence

MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNLNRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLEDALRRQGS

Homology

[Close]

BLAST of Lsi08G010630 vs. Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-18
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 16  NPIVIPSPAE-ERKISNAKLCTQEGVRAGFKNASIACVASAVPTNLNRRKFGKSLCVVNK 75
           +P+  PS A  ++K++ AK C+ EGV AG K A +A VASA+PT                
Sbjct: 6   SPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPT---------------- 65

Query: 76  LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNS 122
           L +VR++PWA+ANLN+TAQALIIS A+ AAYFI ADKT+L  AR+NS
Sbjct: 66  LASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNS 96

[Close]

BLAST of Lsi08G010630 vs. TrEMBL
Match: A0A0A0LPQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372870 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-49
Identity = 110/132 (83.33%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD WVHRRN  VIPSPAE+RKI+NAK CTQEGVRAGFKNASIACVASAVPT  
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN
Sbjct: 61  --------------LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 116

Query: 121 SQLEDALRRQGS 133
           SQLEDALRRQGS
Sbjct: 121 SQLEDALRRQGS 116

[Close]

BLAST of Lsi08G010630 vs. TrEMBL
Match: G7I281_MEDTR (Early nodulin 93 OS=Medicago truncatula GN=MTR_1g007360 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-38
Identity = 88/128 (68.75%), Postives = 97/128 (75.78%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD WV +RN  +I SP EERKI   K CT EGVRAGFK A++ACV S VPT  
Sbjct: 1   MGIPSELRDAWVSKRNSFIIASPDEERKILRTKKCTNEGVRAGFKAAAVACVVSTVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         L AVR+VPWAKANLNYTAQALIISAASIAAYFITADKTILECAR+N
Sbjct: 61  --------------LAAVRMVPWAKANLNYTAQALIISAASIAAYFITADKTILECARKN 112

Query: 121 SQLEDALR 129
           +QLE++LR
Sbjct: 121 AQLENSLR 112

[Close]

BLAST of Lsi08G010630 vs. TrEMBL
Match: V7CX51_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G074600g PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-38
Identity = 90/130 (69.23%), Postives = 99/130 (76.15%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD+ +  +  + + SPAEERKI   K CT EGVRAGFK ASIACVASAVPT  
Sbjct: 1   MGIPSELRDILLPNKKGVFVASPAEERKILRTKQCTSEGVRAGFKAASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         L AVRV+PWAKANLNYTAQALIISAASIAAYFITADKTILECAR+N
Sbjct: 61  --------------LTAVRVIPWAKANLNYTAQALIISAASIAAYFITADKTILECARKN 114

Query: 121 SQLEDALRRQ 131
           +QLEDALR +
Sbjct: 121 AQLEDALRHK 114

[Close]

BLAST of Lsi08G010630 vs. TrEMBL
Match: I3S6T4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.9e-36
Identity = 84/129 (65.12%), Postives = 100/129 (77.52%), Query Frame = 1


Query: 1   MGIPSELRDLWVHR-RNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTN 60
           MGIPSELRD+WV + + P +I SPAEE K+  +K CT EGVRAGFK A+IACV+SAVPT 
Sbjct: 1   MGIPSELRDMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPT- 60

Query: 61  LNRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARR 120
                          L AVR++PWAKANLNYTAQALIISAASIA+YFI ADKTILECAR+
Sbjct: 61  ---------------LAAVRIIPWAKANLNYTAQALIISAASIASYFIAADKTILECARK 113

Query: 121 NSQLEDALR 129
           N++L+D+LR
Sbjct: 121 NARLQDSLR 113

[Close]

BLAST of Lsi08G010630 vs. TrEMBL
Match: I3S983_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 85/133 (63.91%), Postives = 100/133 (75.19%), Query Frame = 1


Query: 1   MGIPSELRDLWVHR-RNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTN 60
           MGIPSELRDLWV + + P +I SPAEE K+  +K CT EGVRAG K A+IACVASAVPT 
Sbjct: 1   MGIPSELRDLWVSKTKTPFLIASPAEESKLLRSKQCTNEGVRAGLKAATIACVASAVPT- 60

Query: 61  LNRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARR 120
                          L AVR++PWAKANLNYTAQALIISAASIA+YFI ADKTILECAR+
Sbjct: 61  ---------------LAAVRMIPWAKANLNYTAQALIISAASIASYFIVADKTILECARK 117

Query: 121 NSQLEDALRRQGS 133
           N++L+D+LR   +
Sbjct: 121 NARLQDSLRHDNT 117

[Close]

BLAST of Lsi08G010630 vs. TAIR10
Match: AT5G25940.1 (AT5G25940.1 early nodulin-related)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 60/111 (54.05%), Postives = 74/111 (66.67%), Query Frame = 1


Query: 14  RRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNLNRRKFGKSLCVVN 73
           ++N  VI SP E  KI  A+   Q G  AG K A++A VASA+PT               
Sbjct: 12  QQNLFVIASPDEIAKIHRAETSKQAGAIAGAKAAAVAAVASAIPT--------------- 71

Query: 74  KLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRNSQLE 125
            + AVR+ PWAKANLNYTAQALIIS+ASIAA+FITADKTIL+ ARRN++ +
Sbjct: 72  -VAAVRMFPWAKANLNYTAQALIISSASIAAFFITADKTILQGARRNTEAQ 106

[Close]

BLAST of Lsi08G010630 vs. NCBI nr
Match: gi|449461339|ref|XP_004148399.1| (PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-49
Identity = 110/132 (83.33%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD WVHRRN  VIPSPAE+RKI+NAK CTQEGVRAGFKNASIACVASAVPT  
Sbjct: 1   MGIPSELRDSWVHRRNSFVIPSPAEDRKIANAKRCTQEGVRAGFKNASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN
Sbjct: 61  --------------LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 116

Query: 121 SQLEDALRRQGS 133
           SQLEDALRRQGS
Sbjct: 121 SQLEDALRRQGS 116

[Close]

BLAST of Lsi08G010630 vs. NCBI nr
Match: gi|659088445|ref|XP_008444985.1| (PREDICTED: early nodulin-93-like [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 9.5e-49
Identity = 109/132 (82.58%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRDLWVHRR+  VIPSPAEERKI+NAK CTQEGVRAGFKNASIACVASAVPT  
Sbjct: 1   MGIPSELRDLWVHRRDSFVIPSPAEERKIANAKRCTQEGVRAGFKNASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN
Sbjct: 61  --------------LVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 116

Query: 121 SQLEDALRRQGS 133
           SQLE+ALR QGS
Sbjct: 121 SQLENALRHQGS 116

[Close]

BLAST of Lsi08G010630 vs. NCBI nr
Match: gi|1009136397|ref|XP_015885503.1| (PREDICTED: early nodulin-93-like [Ziziphus jujuba])

HSP 1 Score: 171.8 bits (434), Expect = 8.1e-40
Identity = 89/132 (67.42%), Postives = 103/132 (78.03%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSE+RD+W+  R  +VI SPAEE+K+  A+ CTQEGVRAGFK ASIACVASAVPT  
Sbjct: 1   MGIPSEMRDIWIKHREALVIASPAEEQKVLRARNCTQEGVRAGFKAASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         LVAVR +PWAKANLNYTAQALIISAAS+AAYFITADKTILECARRN
Sbjct: 61  --------------LVAVRAIPWAKANLNYTAQALIISAASVAAYFITADKTILECARRN 116

Query: 121 SQLEDALRRQGS 133
           +Q ++ +RRQ +
Sbjct: 121 AQFQETMRRQSN 116

[Close]

BLAST of Lsi08G010630 vs. NCBI nr
Match: gi|1021531042|ref|XP_016162475.1| (PREDICTED: early nodulin-93-like [Arachis ipaensis])

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-39
Identity = 92/128 (71.88%), Postives = 98/128 (76.56%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD+WV RR   +I SPAEERKI   K CT EGV AGFK AS+ACVASAVPT  
Sbjct: 1   MGIPSELRDMWVSRRESFLIASPAEERKIVRTKKCTHEGVIAGFKAASVACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         L AVR+VPWAKANLNY AQALIISAASIAAYFITADKTILECARRN
Sbjct: 61  --------------LAAVRMVPWAKANLNYVAQALIISAASIAAYFITADKTILECARRN 112

Query: 121 SQLEDALR 129
           +QLED+LR
Sbjct: 121 AQLEDSLR 112

[Close]

BLAST of Lsi08G010630 vs. NCBI nr
Match: gi|1012195795|ref|XP_015971810.1| (PREDICTED: early nodulin-93-like [Arachis duranensis])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 92/128 (71.88%), Postives = 98/128 (76.56%), Query Frame = 1


Query: 1   MGIPSELRDLWVHRRNPIVIPSPAEERKISNAKLCTQEGVRAGFKNASIACVASAVPTNL 60
           MGIPSELRD+WV RR   +I SPAEERKI   K CT +GV AGFK ASIACVASAVPT  
Sbjct: 1   MGIPSELRDMWVSRRESFLIASPAEERKIVRTKKCTHDGVIAGFKAASIACVASAVPT-- 60

Query: 61  NRRKFGKSLCVVNKLVAVRVVPWAKANLNYTAQALIISAASIAAYFITADKTILECARRN 120
                         L AVR+VPWAKANLNY AQALIISAASIAAYFITADKTILECARRN
Sbjct: 61  --------------LAAVRMVPWAKANLNYVAQALIISAASIAAYFITADKTILECARRN 112

Query: 121 SQLEDALR 129
           +QLED+LR
Sbjct: 121 AQLEDSLR 112

The following BLAST results are available for this feature:

BLAST of Lsi08G010630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NO93_SOYBN	5.1e-18	51.40	Early nodulin-93 OS=Glycine max PE=2 SV=1	[more]

BLAST of Lsi08G010630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPQ5_CUCSA	1.3e-49	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372870 PE=4 SV=1	[more]
G7I281_MEDTR	6.9e-38	68.75	Early nodulin 93 OS=Medicago truncatula GN=MTR_1g007360 PE=2 SV=1	[more]
V7CX51_PHAVU	6.9e-38	69.23	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G074600g PE=4 SV=1	[more]
I3S6T4_LOTJA	4.9e-36	65.12	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
I3S983_LOTJA	1.1e-35	63.91	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of Lsi08G010630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25940.1	1.1e-21	54.05	early nodulin-related	[more]

BLAST of Lsi08G010630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461339\|ref\|XP_004148399.1\|	1.9e-49	83.33	PREDICTED: early nodulin-93-like isoform X1 [Cucumis sativus]	[more]
gi\|659088445\|ref\|XP_008444985.1\|	9.5e-49	82.58	PREDICTED: early nodulin-93-like [Cucumis melo]	[more]
gi\|1009136397\|ref\|XP_015885503.1\|	8.1e-40	67.42	PREDICTED: early nodulin-93-like [Ziziphus jujuba]	[more]
gi\|1021531042\|ref\|XP_016162475.1\|	6.8e-39	71.88	PREDICTED: early nodulin-93-like [Arachis ipaensis]	[more]
gi\|1012195795\|ref\|XP_015971810.1\|	1.2e-38	71.88	PREDICTED: early nodulin-93-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005050	Enod93

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009723	response to ethylene
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G010630.1	Lsi08G010630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005050	Early nodulin 93 ENOD93 protein	PRODOM	PD064786		coord: 22..121 score: 3.0
IPR005050	Early nodulin 93 ENOD93 protein	PFAM	PF03386	ENOD93	coord: 28..59 score: 4.4E-8coord: 70..121 score: 2.0
None	No IPR available	PANTHER	PTHR33605	FAMILY NOT NAMED	coord: 12..58 score: 9.7E-53coord: 75..132 score: 9.7
None	No IPR available	PANTHER	PTHR33605:SF3	EARLY NODULIN-RELATED PROTEIN	coord: 12..58 score: 9.7E-53coord: 75..132 score: 9.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G010630	Csa2G372870	Cucumber (Chinese Long) v2	culsiB140
Lsi08G010630	CSPI02G22020	Wild cucumber (PI 183967)	cpilsiB139
Lsi08G010630	Cucsa.161010	Cucumber (Gy14) v1	cgylsiB267
Lsi08G010630	CmaCh05G005780	Cucurbita maxima (Rimu)	cmalsiB737
Lsi08G010630	CmoCh05G006020	Cucurbita moschata (Rifu)	cmolsiB728
Lsi08G010630	Cla022192	Watermelon (97103) v1	lsiwmB465
Lsi08G010630	MELO3C011124	Melon (DHL92) v3.5.1	lsimeB474
Lsi08G010630	ClCG08G012060	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G010630	MELO3C011124.2	Melon (DHL92) v3.6.1	lsimedB493
Lsi08G010630	Bhi04G000718	Wax gourd	lsiwgoB605
Lsi08G010630	Cp4.1LG11g04960	Cucurbita pepo (Zucchini)	cpelsiB098
Lsi08G010630	Carg08267	Silver-seed gourd	carlsiB056
Lsi08G010630	CsaV3_2G030650	Cucumber (Chinese Long) v3	cuclsiB152

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G010630	Bottle gourd (USVL1VR-Ls)	lsilsiB147
Lsi08G010630	Cucumber (Gy14) v1	cgylsiB512
Lsi08G010630	Cucurbita maxima (Rimu)	cmalsiB184
Lsi08G010630	Cucurbita moschata (Rifu)	cmolsiB021
Lsi08G010630	Cucurbita moschata (Rifu)	cmolsiB175
Lsi08G010630	Cucurbita pepo (Zucchini)	cpelsiB685
Lsi08G010630	Wild cucumber (PI 183967)	cpilsiB238
Lsi08G010630	Cucumber (Chinese Long) v2	culsiB239
Lsi08G010630	Watermelon (Charleston Gray)	lsiwcgB423
Lsi08G010630	Melon (DHL92) v3.5.1	lsimeB485
Lsi08G010630	Watermelon (97103) v1	lsiwmB496
Lsi08G010630	Cucumber (Gy14) v2	cgyblsiB126
Lsi08G010630	Cucumber (Gy14) v2	cgyblsiB225
Lsi08G010630	Melon (DHL92) v3.6.1	lsimedB504
Lsi08G010630	Cucumber (Chinese Long) v3	cuclsiB259
Lsi08G010630	Watermelon (97103) v2	lsiwmbB429
Lsi08G010630	Watermelon (97103) v2	lsiwmbB444
Lsi08G010630	Wax gourd	lsiwgoB626