MELO3C011031 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011031
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMethyl-CpG-binding domain protein
Locationchr3 : 26960363 .. 26961174 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTACCTCTCGGCTTCTCCCTCCCTTTTTTCCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTTTAGATGTAAGATAAACTGTGGAATTGTTCGTTCTTTAAATTTGATTTCTGGTTCTTTGCTATA

mRNA sequence

TCTACCTCTCGGCTTCTCCCTCCCTTTTTTCCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTTTAGATGTAAGATAAACTGTGGAATTGTTCGTTCTTTAAATTTGATTTCTGGTTCTTTGCTATA

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGTAATGCTGTGA

Protein sequence

MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML*
Homology
[Close]
BLAST of MELO3C011031 vs. Swiss-Prot
Match: MBD8_ARATH (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-21
Identity = 80/176 (45.45%), Postives = 97/176 (55.11%), Query Frame = 1 

Query: 20  LPIIDLRLLSQSELHCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+  L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]
BLAST of MELO3C011031 vs. TrEMBL
Match: A0A0A0LPH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.2e-112
Identity = 213/222 (95.95%), Postives = 215/222 (96.85%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKP-AGAAAEEEIVMVML 222
           RPRKDSNRFVQSNGNAAPEFKSG DKP A AAA+EEIVMVML
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222

[Close]
BLAST of MELO3C011031 vs. TrEMBL
Match: W9QJA1_9ROSA (5'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.8e-30
Identity = 88/179 (49.16%), Postives = 109/179 (60.89%), Query Frame = 1 

Query: 8   PSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIPKIDRSVF 67
           PS  +   R + LP++DLRLLSQS+L     FS S SSSS      +DDVLIPKIDRSVF
Sbjct: 13  PSDHHCLLRPDSLPLVDLRLLSQSDL-----FSLSLSSSSQPLGRCDDDVLIPKIDRSVF 72

Query: 68  NESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSH 127
           NESAGSRKQTYSRLRLAPR  QF SSS+  T  P     L  ES Q++ L  QLF     
Sbjct: 73  NESAGSRKQTYSRLRLAPRNSQFPSSSARQTPEP-----LAQESFQVIALLKQLF----- 132

Query: 128 CAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPRKDS 187
                S G  DE + +  H  D +   SS    +++P+ V+  + AP KR+RGRPRK++
Sbjct: 133 -----SSGTNDELVPIRVHYNDAAHEPSSSVAVRNVPIHVVLPNSAPEKRKRGRPRKNA 171

[Close]
BLAST of MELO3C011031 vs. TrEMBL
Match: W9QJA1_9ROSA (5'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1)

HSP 1 Score: 37.7 bits (86), Expect = 2.1e+01
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 1 

Query: 151 SVPDSSYAIFQSIPVDV---IDSSHAPIKRRRGRPRKDSNRFVQ 192
           +VP+ S A   S+PV     I SS   +KR+RGRPRK+  R+V+
Sbjct: 315 AVPNDSLAKIVSVPVSSATDIASSGGQVKRKRGRPRKNETRYVR 358


HSP 2 Score: 132.9 bits (333), Expect = 4.9e-28
Identity = 95/195 (48.72%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 1   MASTTMV----PSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDD 60
           MAS T+V    P  + +   ++ LP+IDLRLLSQS+L+ LS  SSSS S+ T +   +DD
Sbjct: 1   MASATVVDHHNPDPNPNHLHLDSLPLIDLRLLSQSDLYSLSLTSSSSLSNPTRRF--DDD 60

Query: 61  VLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS-SDRLDTESAQIV 120
           VLIPKIDRSVFNESAGSRKQTYSRLRLAPR  QF   +  S   P S S   D E+ QI+
Sbjct: 61  VLIPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFPIPNPKSQPTPFSHSQSRDPETRQII 120

Query: 121 HLFNQLFVGDSHCAVNDSHGDGDEDLVL---VNHTYDESVPDSSYAIFQSIPVDVIDSSH 180
            L  QLF   S  A ND       D+++   V+   D+S+P  S    Q+  V +  S+ 
Sbjct: 121 SLLKQLF-PSSEIAEND-------DVLVSVPVHLAQDDSIPGPS---VQNALVGL--SAD 180

Query: 181 APIKRRRGRPRKDSN 188
             +KR+RGRPRKD+N
Sbjct: 181 VGMKRKRGRPRKDAN 180

[Close]
BLAST of MELO3C011031 vs. TrEMBL
Match: M5XS88_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016410mg PE=4 SV=1)

HSP 1 Score: 33.9 bits (76), Expect = 3.1e+02
Identity = 65/268 (24.25%), Postives = 94/268 (35.07%), Query Frame = 1 

Query: 1   MASTTMV----PSSSNDSYRMNPLPIIDLRLLSQS---ELHCLSR--------------- 60
           MAS T+V    P  + +   ++ LP+IDLRLLSQS    L   S                
Sbjct: 1   MASATVVDHHNPDPNPNHLHLDSLPLIDLRLLSQSDLYSLSLTSSSSLSNPTRRFDDDVL 60

Query: 61  --------FSSSSSSSSTSQS-------NNEDDVLIPKIDRSVFNESAGSRKQTYSRLRL 120
                   F+ S+ S   + S       N++  +  PK   + F+ S     +T   + L
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFPIPNPKSQPTPFSHSQSRDPETRQIISL 120

Query: 121 APRKPQFSSSSSSST--------IRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHG 180
              K  F SS  +          +     D +   S Q     N L    +   +    G
Sbjct: 121 L--KQLFPSSEIAENDDVLVSVPVHLAQDDSIPGPSVQ-----NALVGLSADVGMKRKRG 180

Query: 181 DG--DEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPRKDSNRFVQSN 222
               D + V+        V    +    + P  V+ SS    KR+RGRPRKD NR V  +
Sbjct: 181 RPRKDANAVMAYPMVKADVSIERHGGGDTTPGIVVQSSDG--KRKRGRPRKDENRVVSVS 240


HSP 2 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 88/205 (42.93%), Postives = 114/205 (55.61%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MAS++   S+++    +  LP+IDLR LSQSEL  LS  SS SS          DDV+IP
Sbjct: 3   MASSS---STASGGLHLEALPLIDLRFLSQSELQALSLTSSHSSDLRRC-----DDVVIP 62

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRL---------DTES 120
           KIDRS+FNESAGSRKQTYSRLRLAPRKP  +++      RP+ S  L         D E+
Sbjct: 63  KIDRSIFNESAGSRKQTYSRLRLAPRKPDIAATIPR---RPRFSPHLNQKAALEPVDEEN 122

Query: 121 AQIVHLFNQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS 180
             I+ L   LF  ++H           +DL+ V   Y E    SS  I Q+IP+DV+  S
Sbjct: 123 TLIIGLLKGLFATETHA----------DDLIPVQVEYRE----SSNEILQNIPIDVVADS 180

Query: 181 HAPIKRRRGRPRKDSNRFVQSNGNA 197
               KR+RGRP+ +    V  NG +
Sbjct: 183 GR--KRKRGRPKSEKTIAVYQNGGS 180

[Close]
BLAST of MELO3C011031 vs. TrEMBL
Match: A0A0R0JF04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G102900 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-25
Identity = 88/222 (39.64%), Postives = 127/222 (57.21%), Query Frame = 1 

Query: 5   TMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIPKIDR 64
           T  P  S+D +R+  LP++DLRLLSQ EL+ LS     S ++   + N++DD +IPKIDR
Sbjct: 3   TPEPEPSSD-HRIGSLPLVDLRLLSQPELYTLSL----SGATHRHRRNSDDDSVIPKIDR 62

Query: 65  SVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRP-QSSDRLDTESAQIVHLFNQLFV 124
           S FNESAGSRKQTYS+LRL  RK   +  +SSS   P   S+  + E+++I+ L +QLF 
Sbjct: 63  SNFNESAGSRKQTYSKLRLNKRKQNPAVPASSSFHIPLHISEPEEEENSRIIALLHQLFG 122

Query: 125 GDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPR 184
            +        + D  E  ++  H   +  P  S A+FQ++P+DV+    +  KR+RGRPR
Sbjct: 123 VEPLRNNAPRNNDAPERRLVPVHVEFKQPPPISVALFQNVPIDVVPDG-SQRKRKRGRPR 182

Query: 185 KDSNR---FVQSNGNAAPEFKSGS---DKPAGAAAEEEIVMV 220
           KD N    FV+       E  S +   ++P     EE+ V V
Sbjct: 183 KDENSVTVFVEEPTKVTKEENSLTVFVEEPKKVTNEEKSVKV 218

[Close]
BLAST of MELO3C011031 vs. TAIR10
Match: AT1G22310.2 (AT1G22310.2 methyl-CPG-binding domain 8)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 80/176 (45.45%), Postives = 97/176 (55.11%), Query Frame = 1 

Query: 20  LPIIDLRLLSQSELHCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+  L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]
BLAST of MELO3C011031 vs. NCBI nr
Match: gi|659088180|ref|XP_008444843.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 2.5e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 222
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221

[Close]
BLAST of MELO3C011031 vs. NCBI nr
Match: gi|659088178|ref|XP_008444842.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.0e-117
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 219
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]
BLAST of MELO3C011031 vs. NCBI nr
Match: gi|449469857|ref|XP_004152635.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 4.6e-112
Identity = 213/222 (95.95%), Postives = 215/222 (96.85%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKP-AGAAAEEEIVMVML 222
           RPRKDSNRFVQSNGNAAPEFKSG DKP A AAA+EEIVMVML
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222

[Close]
BLAST of MELO3C011031 vs. NCBI nr
Match: gi|449469855|ref|XP_004152634.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-110
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 1 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKP-AGAAAEEEIVM 219
           RPRKDSNRFVQSNGNAAPEFKSG DKP A AAA+EEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]
BLAST of MELO3C011031 vs. NCBI nr
Match: gi|1009173327|ref|XP_015867757.1| (PREDICTED: uncharacterized protein LOC107405242 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 147.1 bits (370), Expect = 3.6e-32
Identity = 105/222 (47.30%), Postives = 133/222 (59.91%), Query Frame = 1 

Query: 1   MASTTMVPSSSND---SYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDV 60
           MASTT V   + D   S +++ LP+IDL LLSQSEL+ LS  SSSSSS +  +   +DDV
Sbjct: 1   MASTTTVLDPTADDHHSLQLDSLPLIDLNLLSQSELYSLSLCSSSSSSHAHRRC--DDDV 60

Query: 61  LIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSS------------D 120
           LIPKIDRSVFNESAGSRKQTYSRLRLAPR  QF+SSSS+ +    S             +
Sbjct: 61  LIPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFASSSSARSAASSSPSFTRQTTTIAALE 120

Query: 121 RLDTESAQIVHLFNQLFVGDSHCAVNDSHGDGDEDLVLVNHTY--DESVPDSSY--AIFQ 180
            LD E+ QI+ L  QLF   +H           +DLV V   Y  D SV    +   +  
Sbjct: 121 PLDQENVQIIGLLKQLFASKTH-----------DDLVPVRVEYNDDSSVLHQPFNNNVVH 180

Query: 181 SIPVD-VIDSSHAPIKRRRGRPRKDSNRFVQ---SNGNAAPE 200
           SIP+D V+  + +  KR+RGRPRKD+N  V+   SNG++  E
Sbjct: 181 SIPIDVVVFDNTSQKKRKRGRPRKDANLAVENFYSNGSSTRE 209

The following BLAST results are available for this feature:
BLAST of MELO3C011031 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MBD8_ARATH2.8e-2145.45Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 P... [more]
BLAST of MELO3C011031 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPH8_CUCSA3.2e-11295.95Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368980 PE=4 SV=1[more]
W9QJA1_9ROSA6.8e-3049.165'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1[more]
W9QJA1_9ROSA2.1e+0145.455'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1[more]
M5XS88_PRUPE3.1e+0224.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016410mg PE=4 SV=1[more]
A0A0R0JF04_SOYBN2.3e-2539.64Uncharacterized protein OS=Glycine max GN=GLYMA_06G102900 PE=4 SV=1[more]
BLAST of MELO3C011031 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22310.21.6e-2245.45 methyl-CPG-binding domain 8[more]
BLAST of MELO3C011031 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088180|ref|XP_008444843.1|2.5e-118100.00PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me... [more]
gi|659088178|ref|XP_008444842.1|8.0e-117100.00PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis me... [more]
gi|449469857|ref|XP_004152635.1|4.6e-11295.95PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sa... [more]
gi|449469855|ref|XP_004152634.1|1.5e-11095.89PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sa... [more]
gi|1009173327|ref|XP_015867757.1|3.6e-3247.30PREDICTED: uncharacterized protein LOC107405242 isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005488 binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU52594melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011031T1MELO3C011031T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU52594MU52594transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37701FAMILY NOT NAMEDcoord: 1..187
score: 8.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011031Csa2G368980Cucumber (Chinese Long) v2cumeB117
MELO3C011031Cla022100Watermelon (97103) v1mewmB307
MELO3C011031ClCG08G011160Watermelon (Charleston Gray)mewcgB299
MELO3C011031Cla97C08G154130Watermelon (97103) v2mewmbB306
MELO3C011031Bhi04G000631Wax gourdmewgoB346
MELO3C011031CSPI02G21070Wild cucumber (PI 183967)cpimeB118
MELO3C011031CmaCh12G001600Cucurbita maxima (Rimu)cmameB165
MELO3C011031CmaCh05G005020Cucurbita maxima (Rimu)cmameB728
MELO3C011031CmoCh05G005270Cucurbita moschata (Rifu)cmomeB719
MELO3C011031CmoCh12G001240Cucurbita moschata (Rifu)cmomeB154
MELO3C011031Lsi08G009700Bottle gourd (USVL1VR-Ls)lsimeB474
MELO3C011031Cp4.1LG11g04500Cucurbita pepo (Zucchini)cpemeB092
MELO3C011031Cp4.1LG07g01390Cucurbita pepo (Zucchini)cpemeB764
MELO3C011031CsGy2G020790Cucumber (Gy14) v2cgybmeB102
MELO3C011031Carg20537Silver-seed gourdcarmeB0648
MELO3C011031Carg08191Silver-seed gourdcarmeB0058
MELO3C011031CsaV3_2G029730Cucumber (Chinese Long) v3cucmeB124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011031Cucurbita pepo (Zucchini)cpemeB051
MELO3C011031Cucurbita pepo (Zucchini)cpemeB440
MELO3C011031Bottle gourd (USVL1VR-Ls)lsimeB136
MELO3C011031Bottle gourd (USVL1VR-Ls)lsimeB305
MELO3C011031Cucumber (Gy14) v2cgybmeB171
MELO3C011031Cucumber (Gy14) v2cgybmeB413
MELO3C011031Silver-seed gourdcarmeB0407
MELO3C011031Silver-seed gourdcarmeB0981
MELO3C011031Cucumber (Chinese Long) v3cucmeB203
MELO3C011031Cucumber (Chinese Long) v3cucmeB482
MELO3C011031Watermelon (97103) v2mewmbB275
MELO3C011031Watermelon (97103) v2mewmbB284
MELO3C011031Wax gourdmewgoB356
MELO3C011031Wax gourdmewgoB371
MELO3C011031Melon (DHL92) v3.5.1memeB120
MELO3C011031Melon (DHL92) v3.5.1memeB131
MELO3C011031Cucumber (Gy14) v1cgymeB127
MELO3C011031Cucumber (Gy14) v1cgymeB276
MELO3C011031Cucumber (Gy14) v1cgymeB515
MELO3C011031Cucurbita maxima (Rimu)cmameB597
MELO3C011031Cucurbita maxima (Rimu)cmameB787
MELO3C011031Cucurbita moschata (Rifu)cmomeB405
MELO3C011031Cucurbita moschata (Rifu)cmomeB587
MELO3C011031Cucurbita moschata (Rifu)cmomeB774
MELO3C011031Wild cucumber (PI 183967)cpimeB197
MELO3C011031Wild cucumber (PI 183967)cpimeB471
MELO3C011031Cucumber (Chinese Long) v2cumeB205
MELO3C011031Cucumber (Chinese Long) v2cumeB471
MELO3C011031Watermelon (Charleston Gray)mewcgB274
MELO3C011031Watermelon (Charleston Gray)mewcgB279
MELO3C011031Watermelon (97103) v1mewmB323
MELO3C011031Watermelon (97103) v1mewmB335