CmaCh12G001600 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G001600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMethyl-CpG-binding domain protein
LocationCma_Chr12 : 707172 .. 717804 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTCCCTCCCTTTTTTTTCGCAATTTACAGGACCTCATGCCATATCCATGGCTTCCACAACTATGGTTGCTTCCCCCTCCGACGACAGATTCCGCATGAATACTCTCCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAACTCTATTGTCTCTCTCGTTTCTCCTCCTCATCGTCGTCTTCAATGTCCCAATCCAACAACGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCTCGTCTTCGTCTTGCCCCTCGCAAATCTCAGTTTCCTTCCTCATCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCTTCGATGAAGAGAGCGCTGAGATTGTTACTCTCTTCAAGCAGCTCTTCGTTGGAGAGTCTCATTGTGGCGTCAATGACAGCTATGATGATGGAGATGAGGACCTGGTTCTTGTTAACCACATTTATGATGAATCGGTACCTGAATCTTCCTACGCGATTTTTCACAGTATTCCTGTTGATATCATCGATAGCAGTTACGCTCCGATTAAGCGGCGGCGAGGACGACCACGGAAGGATAGTAATCGGTTTGCTCAGAGCAATGGAAATGCGGCTGCGAACTCCATAAGCGGATGCGATAAACGAGCGGAGGAGGATGAGATCGTAATGGTAATGCTGTGACCTGGTCGCTTCGACCTACCTGTATACGTAAGATAACTGTTATTCTTCGTTCTTTAAATTTGATTGATTGTTCTCGACTTTATTTATATGTTCTTTCCGTTTATTTTCCAAGTTTACTGAAAGATTTTTTAAAATAACTTTTCTGGAAAAAAAACAGAAAGAAAGAAAGAAAATACGAAACAGTATTTTGATTTTCGATCTTTTTTAAAAAAATTATTTTTGTAAAAATTGAATTGTTCAGAATTAATTTATGTTTTTCGACTTTCTTTTCTCAGTTTTTTAAAAATAAGTATAGTCTAGTTTATCGAACTAAGTTTTGTTAATAATCTTTTCTGTGATTAAATGAAACTTGAATTGATGGACTAGTTATTTTCTTTAAATGACTAGCAGCTTTGAAGTCCTGAATATCAGTTCTTGATTTGCTACTTTCTTTCTCAGTTTTTTCATGTCAATTGCATGTATTTATTTTATCATTTGCTTTTACCGATGGTGTACATGTTGACCTTCTGCATCTGAATTTATATATTTTGATAATATTTGTCTGCGAAATGCCTGACTTGTTTTTTTTTTTTTTTTGTTTTTTTAATTTCATATTTCTACATATTACTAATTAGTTTACTGAATTTTGCATGCTCTTAATTCAAACTAAACTATGGAGTATATTGGGTTAAAATTGAGTTTTCTTGGTAACCAAATGTTGTAGAGTTAGATGTTAAATCTGTCTAGTTTTCTTAGCAACTAAATATTATAGGATCAAATAGTTGTCCGATGAGACAATTAAGGTATGCACAAGGTAGCCTAGGTCGGAAAATAATAATAATAATAATAATAATAATAATTTAATTAACCTAGAGGTAGTTATTTATTTTATTCCCATTGCAGTGCAGAGGTGAAAATCAGGTCGAGAGATAGAGATTGCTAATGAAGAAGAAAACCTTAGGTGAAAAAGATTCTAAATCTAATGTTCTGAATTCTCCTTTTCCAAGAAGGCTACATCTCTTTATAGCTATACTTTCATTTTTTTAGAGGCAACCCTCTTCTCAAAAGAGTTCATAAATAGGAAGATTTTGTGCCCATGTTGTCCCTTTACTCGAAATTCTTCATTACAAAAGTAGCCTATAATTTCGTAATTCCTGGAGTGTATTGACAGAGTAAGGAGTGCCCACAAACGTGAAAAGATTTTCGGTATATTATAAACACACCCAGAAGTAGAGCATATCCATACCTTCTACGAAGTCGCTTCTGTGAATGTACTGGAAATTTGAATTGTTCCTGCTTTATGCAATCCACTCTCAGAATTGTTCTTCATGTGAAGCTCAGATTTTCTTCTAAAATTGCAGGACTCGGATTATTCCGATCAAATATTAAGTATAATCGTTAAAATGCAAGAACATGCATTCAAAAAGTAGTTTTAGTTTGTTATTTGAGAATATGTCAAATGGTTGAGACATATATCCTTAACTTAGAGATTAGAGATTCAAATTTCTCCACCCACATTTTGTTAGAACTAAAACTTTTAGCTTGGTTTGACAAAAGCCTCGGTCATATATCAAATTAGTCCATTTTAAAATTTATTGAAAGGTGAGTAGCTGAGAGATTTCTTCATACAAAGAAGAAGAAAAAAAAGGTTAACCAATTTTGTCATCCTCAAGTTATTAGCCTCCTGTCATATTCTTACTTTATTACTGGCTCCACGTGTGATATGATGAGATTGATTTATCACTGGGATGTAAATTATGTGCTGTAATCCTTAGAAAACAAATTCATTAACTCTAGGAGAAATTAAGGCCGGTTAAGATTGTGCTACAATCACGGGTGATTAAGACTGCCTATTTTATTTCCTAATAATTTTTTTTTTTGTTAGACTACTATTTGGACCGAGAAAAAAGCCAAACATGGTATAGTTTTGGGATGATTAATCTAGTTCACTATAGTTCCATTGGTGTAACAGAGGAAATCTCTTCGTGAAGCAGAAAGATGAAAGTCAAATAACTAATAAACAATACTTTGGATTTGGACAAGGAAGATATGTAATGGTTGGTTGTAGGATTGTAGCTCAGATTTTCATAAGTTTTATCTATAGGGGAGTCTCACTTCAAGCATTCCAAAAGGATTCGGAGAGGAAGATTATGAAATCGTGGCTTCTTAAAGAAAAATTTGTATGATTCTTGTGTTTTATTTGAGGGTTAATAGTGATGAGCTACATATATTCTCGTTAAGACTGCCCCATTTCAGGGAGACCAGAAATTGATTGATATGCCGGCCAAATGGATAGCTTGAGACAAGGCCAACCTGAGGTGGTTTAGAGGGTAAATAAAAAAATGTTTCAAGTTATTTTAAAAATTAAATAGTAATAAATGATCGAATGAGTTGGAGACAGTAATTTTTAATCACTGCATAATTAGAGTTCTGTGATGGTCTGAAAAAGAGTGGCAATGTGGTTCTTTATGAGGGGAGGGTGTGACAAAAACGGAAGGCCTTCACCATTGAAGTGGGTTAAGATTTTCCTGTTGGCAGGAAAGGAAGTTTGGTAATTTGTTGTTTGTGCAAGGAAAATGTGGCACTCATCGAAAGTACTTGTGGCGGTTTCTAGTTGGGGAACTAACTTTCAATAGTACATTTCCATTGGGACCAAAAATTGTGCTTCTTCGAAAATGAAACGGATGCCCTTGAAATCCGTGGAAAAGTTACTGCTAAAATCTTGTTACTTCCTTCGGTGCACCAGATTCGAGGTTGGAATGGATTAGAATAAACTGGTTTAGGCTGAGTTATATCTGTGATTTTAGAGTGGGTGTCAACTGTCTAGGAAGTAGGAACTACGCATCTTTTGTCTTATGCCAAGTGTCAGCGTCGTCGTTTCGGTGTTCAATATGGGGTCCTACATTTTCTAAAAGAATTTCAGGCGATGTTTGGACTTTGGACCCGCGAAGACCGCACTTGGGGCATCTTGGGAAGCGTGCCGGGATGAAAAGTTGAATCACTTTTATCGATGAACTAAACCTATCTTCATTGAAGCTTAAGAACTCAAGGAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAGAAGATTGAGAAAAGACAATAATTATAATAATAGATGAAATCTCCCAACAAATGATACGGGCCCACGACTATTTAGAGAAAAAAAAAAAGGATGGAAATAACATGTTAAATTATTCACACATTCGTGGGTCTTTTATGTTCCTACTTGATAATTACATGTTATGTTCCTAGGCACATCTTAGTGGGTCTTTTATGTAAATATTTTGAGTGTTTAAATTATCTTGTATGCACTTTGATTTTCGTGGGACAACCTAATGTTACTACATTTGGTTGTTGAGATAACCCCTAAAATTATTTTAGGGGTCATTTTTTTAATAACATATATGAGATATGAATATTTGAATTTCTGATCTTAAGGAAATGAGTACATGACAATCACTATTTTGACAATCTTATTTATTTTAAAATTTATTTACACCCAAAATTTACTTAGTTTCTTATAAAAAATTACTTATATTCTTATTAAAAAATTACTTAAATTAATTAAATCAAATAATATTTACAATGAAGCATAAAAAGTAAATTTAGAATTAAATTCATTTGTATTAAATGAGAATGTAAGATTGAGTGGAGTAAATTAGTCAATAATTTAAGAATCAACTAATATTTTGTTCAAATAGTTAATTAAATTAAGTAAAAAAGAGGAAAGATTCGTTTTTTCTTACCCAAATAACTTTCAATTTTATCAAATTAAATCTTATAATAAATAAATTGTCAAATTAATACTCACAAATACTTGGTTATAACATTTTAATGAAGATTTGTTGCTTGCTATGAATAGACTATTTTTATGAATATTGGTTCTTTATTTAGATTGGGTGTTTTTTAGTTGGTTTTAGATATTTTGTTGTTGAGTTTGCGTGTTTTTTTTTGTCTGATTTTGTGGCTGGGTTCAAACATTTTCGTAGTTGGATGTTTGGCATTTATGTAGTTTGATTAGATGTGTGAAAATCATGATATTTTATGGGGTAATTTGAACTTCACATGATGAACAATTTGTGGTATCTAGATCAAGCATTGAGGTTAGAATTACCCTTTAGTGCTTTCACAAAAGTGGCTTTTGTATAAAGCATAGACATACTCTATTTAGATTAGCAAGGCTTTTCAACCAAGGCATGGCCACTTATTATGTCAATTGGACACTCACTATAGTAATATTCAAAAACATCCCATTCATAGGTCTTTAGGAAGTATGGGGATCTAGATGCCTAAGGTATTTGGATTCAACATTAGAATAACTACGTTAATTTTACTATAATTTTGGTATTATACTAGTTGAGCATAACTCAATTGGTTAACGTATGATATCTTCACTAGAGAGGTAGAGAGATTCAAATCTCCACCTCACAGGTTAGATTTAACATTATTCAACATGCCTGGTGCATGGTTAGACATTAAATTTGGTTTCTTCTTTTATCTAATAATATAAATGTCAGCTAATGTTGTTTCAATCTCTTGAATAATTTCTTGTAGAAGAGAGGTTGAGGGTTAATAACTTTTTTTTTTGTTGTTTATGTTAGAGCTTAAGAGGATACTTCAACATAATACCATATTTTCTTATTGTTCAAGCTTTAATATATTTTTTATTTCAATACTCTGGTTTCAATCAACCTAGCTATTGACTTATTCTTGACCTTAGATGTTAAATTTGTTCATTTATAGTGCTTCTACACATAACATTTTGATGGATTAGAAAGATGACCTTTCCCCACCATAATAGCACCAACTACCTTTACTAAATTACGATGGTAGTAACACCATGAGGCGAGGCAGGGATGGGATGACTTCCCCTTGCCCGCCCATTTTCATCCACGGCATCCTTTCGATTCTCTATCAGTGCAAAATTTTCTATTATTTTGCAAGAATCAAAGTAGGAATTTCTCGTGGAAAAATTGCGTGAGTCAGATTGGAATTCCTCCCTCCTTGATCCCTCCGAAGTTTCTCGCCCCATTTGAACAGAGTCCCCATGGGAAAAAGAACATTCCTAAATAGAAGTGAGCGTATCTAGCCTAGCAACATCTCTCCTTTATCTTTTATTGGACATAGTTTACTTATTATTTCAACTACCACAGTTCGATCTAGTGGTCAAAAAGGGCCGTATAAATGTTAAAAATCCCAGAGGGAATGAGTTTAATCCAGGATAAACCACATGCTTAAGGTTTAAGATAATCCTAGGATTAGGCACTAAATGTAGTAGGATTAGGCAGCTGTCCCTTGAAAATAGTCAAGGTGTGCCAAATTGACTTGTACATTCACAAAAATATAAAATAAAAAGAATAAAATCATAGTTCCACTATGAAAGTCATAAAACGTTTTTGCTCCTTGTTTCTTTTATCTTCTATTTTCAATTTTTTATTTCCTATTTTTTTGAAATGAAAAACAAAAATGTGTTGGGTAGTTATTTTTATTGAAAAAGAAGCAAAATTATGTTTGATAATTGTTTGTGTTTTTTTTCTTCTTTTTTTTGTGTTTTTTTTTGTTTGATGTCCATGATGTACAAGTTATAGCTTGAACACACCTCAAATAATGGATGTCCAACATGATGGTTGTATTCTCTTAAATTTTACATTAAAAAAATAAAAAATATTTGTTTAATTTTTTTCTTAAACACAAAACATAAATTATTATGTTATATTTATTTCTTTAAAATTGATTGTTTCTCTTATAAATAAATAAAACAAAATAATTTTTTATTTTAAAATTTTAAAATTTTGGAAATAGGACAGTGTTCTCTCAATTTGTGGGGTGGGTATTCAAACTTATGATCGGTTCATATGCCTTTGTCTTAGTGAGTTCAGTCTGACCAGGTTGATGCAAATTTTGGAGTCATTTTTTTACTTATAATATGCATAATAAATGCTAAAATTTATATTTAACATAATACTTTGATTGTTTTTTATTTTTTATAAAAAATTTAAAGTTTGAGAGAACAAGAAACAAGAATTGTTTTTTTTTTTAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAATACTTCATGCCTTTTTTTTTTCCCCTTTAAAAATAAGAAACAAGGAAGCAGGTACGAAATTTCTATACAATTTTGGGAATGGTTCTTGAAAATGAGAAAAGAGAGGATGAACTCTTCGCAAATGCATGTGTTTCTAAAAACTTAAATAATAAATAGAAACATTATCAAATTATATGCAAGTTAGAATTGCTTGGTATGATGAATTTTGAAGCAATATGGATGTCAACAAATGTGAGTTGGGCATCTCGGACACAAGCTCTTAAAAACATTAGACTATATATAAAATAGGAGAATTACCATGTAGGGCTTTCAAAGTTCCCTAGCTTAGATAATTACACCGTTGGATTCTTGCTGAAAAGGATCCGACTCTTCAAAATGATAATCACAATATGGTTATTTTTTGAGAATGATGTATAAATGAGTTTTGTTCAGTTCCAAACAAAAGCAATGTGGCCAATGTGAGTGATTATTGGCCAATATGGTTCGGGTGTTTTCTCTATTAATTGCTAGAATAGGCGACCAAGAAGGAGAAAAATAGCTTTTTAGGAGGAGAAAAATAGAGCAAGTTCTAGATGCTGTAACCTATAAATGTGTAAAAGACCAGAAGTGAAGAAGAATTATGCAGGGAAATGTTTTGAATATGAGTTGAGGTTATATAATTGTATCTTTTCTACAAATTTCTCCATCATTATGACTAGAGATTCTAGATAAAAGATGCATGCTTCAGTCAGAGATCCTCTTCTCCCTTACTTTCTTACCCCGTGGCCCATCTTTTTAGTTGAATTAGGAAGAAAAGCATATCATGTGATTTTATGTACCACAACAGAGGAAGAAAAGGTTCTAATGGGAAGGAACTGTAGGTTCAAAAGGATTCAGGTTTGCATATTATCATCTTAGGTTTCTTTATTGCTAGTAATAACGTAACAGCGTTTCTTTATTGCTAGTAATAACGTAACAGCCCAAGCTCATCACTGGAAGATATTATCTGTTTTGGTCCATTACATATCGTCGCCAGCTTCATGGTTTTAGAACACGTCTACTAGGGAGGTTTTCATCCCCTTATAACAAATGTTTCGTTCCCCGGGAATCTCACATGGATTAATAGAGAGTTGTTATACTAGGTCGTGAGTAAGAAAAGCTTCTCCAGTTATCTATGGGTCTCTTTGAATGGACATCCTACTTTTTATGCATTTTGGTAATGTGTTATAGAGTGAGTCTTTGCCTAATGAACTAAATGGAAGAAGACTTGGATTTCCAAGGGGAGCCCATTTATTATTTGTTTCTCTTCAAACTTTTAGCTAGATGAAGTAAAAAAGATTGATAAGATTTATTAGAACAATTATTTTGATAACATCATGAATATCTTGGCTAGCTTTCATTCACCTTGTTTATTTCTACGAGGTAATGCTTAACTCTATAAGGGAATCTAAAAACTTATGATATTTTATGTCATAGAGACTTCTGTATGGGAGGGGGCTAATTCTTTATGAACGCAATCGCATTATTAGTAAGAAATAAACTTGTGCTTGGGGGACTTGATAGCAAATGGATTTCGACGTTTGTGCTAGAAAAGGAAACTCTTTGGAGAGATGTTATGAAAGGCTCATTGATATGTGAATCCAACTAGTCATCAGCCAAGAATCACATCAAATTTGAGTGAATTCAGTATGACATTCTACATTCGAAACGTATTCGAACATCTCCTAAATATAGTTTCTGGTGAAAAACTATAATATGCCCCGAGGAATTCCTGCTCAGCTATACTATACTCGACGTGGCTCCATAGGTTTTTTTTCTCAACCAGGAATCTTGTCCAATCCCGAGTCAAGGCCTAATCCCCTCTCGAGATATTTAGACTCTTTCTAGGATCATGGTGGCTCTTATATGCCATGAGAAAGGATTACTGATCCAATTACCAAGTAGTCAGCTGCATTAAGAACAAGTTACTATTAATCGCTCAATTTGATGGATGAATCCTTTTTGTCGCAAGCATGTGCTTACAAAACTGTTTTAATCCATGGCATTCATGTCATGACTTGTTTTTGATTGTGTACCTTGCGTAGAATTTAAACTTCATTGATATTGGTTTGCTAGAAACAATCTGTTTTACGTTAACAGCTCTTCTTCGATGTTATTTAGACATGATTTATTGTTTTATTATATGAGTGCCTCTATGCATTTAAGACAATATTAATTACTTGTTTCTTCAAACTAATTGATTCATTTAACAAATTTATTAGTAAACAGGTCTAAGTCATTTCCACTAGTGAAATTCTTGACTATCTATACTCGCTTATAATCCATCCACAAATGAAAAATGCTTTGGAACAAACTGTTTAAGATTATATTGTGACTACAGAAATTGATTAATTGTTCCTTATCTCATTCATATACATCTTCCTTATCTCATTCATATACATCTCTTTGTTTCTTGAGCTGAGCTGATAGTGAGTCAAATTTTTTATGATTCTATTATACATGATTGAGTTGTAAAAACTTTTGGATAAATATTCCACTAGAGAATCTCTTTTTAGTTGCTCTCGAACAATTAGGAGATTCTCTAGAAGAAATATGGGTGTCTGGCAACATATTATGAAGTGGTGGTTCCACTTATGGAGTCAAATTAATACGTTCAAAGAAGAAAGATTGGAATATCAATCTCAATTCCATCAATCGAATTGCGTTTTGAGAATGAGGCATCTAAATCAAAGTAAAGAGATTATTCATGATAAAATAGAATCCTTTCTTACCATTCTTATTGTTTGTGAATCCCATCCATTTTAAGAGTTGTATTTTTAGTCTATTTTCCACCATAATCTTACTGTTTGCTTAATTGCATTGCAGGATCTTAGTGCTTTAGGAGATTAGGCAGACGATGGCACAGAGATGTAGACTAAGCTGAACTGTATAGATTTTTTTAGACAGTTGAACACGATTAACCTAGCTGATGAAGGAGAATGATTTGATGGTCGATTGGTTTCGAGACGGTATCTGCTGGAAACTTTTGCTTTCGAGACGAGATCTCTTACCCAAGTTGATGCAAGTTGATGCAGATACTCAATTATGTAGACATTTGGTTTTTTTTTTTACACGATCTTCCTGCCTATTGTTGGAGTTAGCTTACAATTTTGTCACTCGAGTAGGAAAAATACTGTGAATAGTATCATCCCAAATTCATTTTTAGTTGGACGATTTCGTCGCTCAAACCACTTAAGTGTTGAAAGCAAATTCGAGGATGTAATTGTAACAAGGTTTATACTCAAAAAGTATTATTAGCTAGGGTGCTTGAATTGTTGGTATGCTATTATCTTCTGATGCATGGTTAAAGGTC

mRNA sequence

CCTCTCCCTCCCTTTTTTTTCGCAATTTACAGGACCTCATGCCATATCCATGGCTTCCACAACTATGGTTGCTTCCCCCTCCGACGACAGATTCCGCATGAATACTCTCCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAACTCTATTGTCTCTCTCGTTTCTCCTCCTCATCGTCGTCTTCAATGTCCCAATCCAACAACGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCTCGTCTTCGTCTTGCCCCTCGCAAATCTCAGTTTCCTTCCTCATCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCTTCGATGAAGAGAGCGCTGAGATTGTTACTCTCTTCAAGCAGCTCTTCGTTGGAGAGTCTCATTGTGGCGTCAATGACAGCTATGATGATGGAGATGAGGACCTGGTTCTTGTTAACCACATTTATGATGAATCGGTACCTGAATCTTCCTACGCGATTTTTCACAGTATTCCTGTTGATATCATCGATAGCAGTTACGCTCCGATTAAGCGGCGGCGAGGACGACCACGGAAGGATAGTAATCGGTTTGCTCAGAGCAATGGAAATGCGGCTGCGAACTCCATAAGCGGATGCGATAAACGAGCGGAGGAGGATGAGATCGTAATGGATCTTAGTGCTTTAGGAGATTAGGCAGACGATGGCACAGAGATGTAGACTAAGCTGAACTGTATAGATTTTTTTAGACAGTTGAACACGATTAACCTAGCTGATGAAGGAGAATGATTTGATGGTCGATTGGTTTCGAGACGGTATCTGCTGGAAACTTTTGCTTTCGAGACGAGATCTCTTACCCAAGTTGATGCAAGTTGATGCAGATACTCAATTATGTAGACATTTGGTTTTTTTTTTTACACGATCTTCCTGCCTATTGTTGGAGTTAGCTTACAATTTTGTCACTCGAGTAGGAAAAATACTGTGAATAGTATCATCCCAAATTCATTTTTAGTTGGACGATTTCGTCGCTCAAACCACTTAAGTGTTGAAAGCAAATTCGAGGATGTAATTGTAACAAGGTTTATACTCAAAAAGTATTATTAGCTAGGGTGCTTGAATTGTTGGTATGCTATTATCTTCTGATGCATGGTTAAAGGTC

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTGCTTCCCCCTCCGACGACAGATTCCGCATGAATACTCTCCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAACTCTATTGTCTCTCTCGTTTCTCCTCCTCATCGTCGTCTTCAATGTCCCAATCCAACAACGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCTCGTCTTCGTCTTGCCCCTCGCAAATCTCAGTTTCCTTCCTCATCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCTTCGATGAAGAGAGCGCTGAGATTGTTACTCTCTTCAAGCAGCTCTTCGTTGGAGAGTCTCATTGTGGCGTCAATGACAGCTATGATGATGGAGATGAGGACCTGGTTCTTGTTAACCACATTTATGATGAATCGGTACCTGAATCTTCCTACGCGATTTTTCACAGTATTCCTGTTGATATCATCGATAGCAGTTACGCTCCGATTAAGCGGCGGCGAGGACGACCACGGAAGGATAGTAATCGGTTTGCTCAGAGCAATGGAAATGCGGCTGCGAACTCCATAAGCGGATGCGATAAACGAGCGGAGGAGGATGAGATCGTAATGGATCTTAGTGCTTTAGGAGATTAG

Protein sequence

MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMDLSALGD
Homology
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BLAST of CmaCh12G001600 vs. Swiss-Prot
Match: MBD8_ARATH (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 1 

Query: 13  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSMSQSNNDDDVLIPKIDRSVFNES 72
           +R    +LP+ID RLLSQSEL  LS+ SS   SSS+S++ S   DD L PKIDRSVFNES
Sbjct: 19  NRLSAESLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNES 78

Query: 73  AGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGV 132
           AGSRKQT+ RLRLA R  Q P    S   + Q  D   EE  ++ +L + LF  +S+   
Sbjct: 79  AGSRKQTFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS- 138

Query: 133 NDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRK 187
            +  D+G+E+L       +  +  +SY ++    +D I       +S   IKR+RGRPRK
Sbjct: 139 KEEEDEGEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRK 192

[Close]
BLAST of CmaCh12G001600 vs. TrEMBL
Match: A0A0A0LPH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 180/219 (82.19%), Postives = 190/219 (86.76%), Query Frame = 1 

Query: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSS-SSSSMSQSNNDDDVLIP 60
           MASTTMV S S+D +RMN LPIIDLRLLSQSEL+CLSRFSSS SSSS SQSNN+DDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QF SSSSSSTIRPQSPDR D ESA+IV LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC VNDSY DGDEDLVLVNH YDESVP+SSYAIF SIPVD+IDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAANSISGCDK----RAEEDEIVM 215
           RPRKDSNRF QSNGNAA    SGCDK     A ++EIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

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BLAST of CmaCh12G001600 vs. TrEMBL
Match: W9QJA1_9ROSA (5'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 96/192 (50.00%), Postives = 124/192 (64.58%), Query Frame = 1 

Query: 1   MASTTMVAS---PSDDR--FRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDD 60
           MAS   V S   PSD     R ++LP++DLRLLSQS+L+ LS     SSSS      DDD
Sbjct: 1   MASAAGVDSSPYPSDHHCLLRPDSLPLVDLRLLSQSDLFSLSL----SSSSQPLGRCDDD 60

Query: 61  VLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVT 120
           VLIPKIDRSVFNESAGSRKQTYSRLRLAPR SQFPSSS+      Q+P+   +ES +++ 
Sbjct: 61  VLIPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFPSSSAR-----QTPEPLAQESFQVIA 120

Query: 121 LFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESV--PESSYAIFHSIPVDIIDSSYAP 180
           L KQLF      G ND       +LV +   Y+++   P SS A+  ++P+ ++  + AP
Sbjct: 121 LLKQLFSS----GTND-------ELVPIRVHYNDAAHEPSSSVAV-RNVPIHVVLPNSAP 171

Query: 181 IKRRRGRPRKDS 186
            KR+RGRPRK++
Sbjct: 181 EKRKRGRPRKNA 171

[Close]
BLAST of CmaCh12G001600 vs. TrEMBL
Match: M5XS88_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016410mg PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 96/195 (49.23%), Postives = 125/195 (64.10%), Query Frame = 1 

Query: 1   MASTTMV----ASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDDV 60
           MAS T+V      P+ +   +++LP+IDLRLLSQS+LY LS  SSSS S+ ++   DDDV
Sbjct: 1   MASATVVDHHNPDPNPNHLHLDSLPLIDLRLLSQSDLYSLSLTSSSSLSNPTR-RFDDDV 60

Query: 61  LIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRF-DEESAEIVT 120
           LIPKIDRSVFNESAGSRKQTYSRLRLAPR SQFP  +  S   P S  +  D E+ +I++
Sbjct: 61  LIPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFPIPNPKSQPTPFSHSQSRDPETRQIIS 120

Query: 121 LFKQLFVGESHCGVNDSYDDGDEDLVLVN---HI-YDESVPESSYAIFHSIPVDIIDSSY 180
           L KQLF          S +  + D VLV+   H+  D+S+P  S     +  V +  S+ 
Sbjct: 121 LLKQLF---------PSSEIAENDDVLVSVPVHLAQDDSIPGPS---VQNALVGL--SAD 180

Query: 181 APIKRRRGRPRKDSN 187
             +KR+RGRPRKD+N
Sbjct: 181 VGMKRKRGRPRKDAN 180

[Close]
BLAST of CmaCh12G001600 vs. TrEMBL
Match: A0A151U8U6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019812 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = 1 

Query: 7   VASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDDVLIPKIDRSVF 66
           +A+P      +++LP++DLRLLSQSELY LS     S ++      +DD +IPKIDRSVF
Sbjct: 1   MATPEPSPDHIDSLPLVDLRLLSQSELYTLSL----SGATHRHRRTEDDSVIPKIDRSVF 60

Query: 67  NESAGSRKQTYSRLRLAPRK--SQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGE 126
           NESAGSRKQTYS+LRL  +K  S  P+SSSS  I    P+  D+E+++I+ L +QLF  E
Sbjct: 61  NESAGSRKQTYSKLRLNKQKPNSAVPASSSSFHIPLHIPEPVDQENSQIIALLQQLFGVE 120

Query: 127 SHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKD 186
                +   D  D  LV V   +   +PE  YA   ++P+D++D      KR+RGRPRK+
Sbjct: 121 PLRNASRRNDAEDRRLVPVQVEFKPPLPE--YATLRNVPIDVVDGGQR--KRKRGRPRKN 174

[Close]
BLAST of CmaCh12G001600 vs. TrEMBL
Match: A0A0R0JF04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G102900 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-23
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 1 

Query: 10  PSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDDVLIPKIDRSVFNES 69
           PS D  R+ +LP++DLRLLSQ ELY LS    S ++   + N+DDD +IPKIDRS FNES
Sbjct: 8   PSSDH-RIGSLPLVDLRLLSQPELYTLSL---SGATHRHRRNSDDDSVIPKIDRSNFNES 67

Query: 70  AGSRKQTYSRLRLAPRKSQFPS--SSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHC 129
           AGSRKQTYS+LRL  RK Q P+  +SSS  I     +  +EE++ I+ L  QLF  E   
Sbjct: 68  AGSRKQTYSKLRLNKRK-QNPAVPASSSFHIPLHISEPEEEENSRIIALLHQLFGVEPLR 127

Query: 130 GVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSN 187
                 +D  E  ++  H+  +  P  S A+F ++P+D++    +  KR+RGRPRKD N
Sbjct: 128 NNAPRNNDAPERRLVPVHVEFKQPPPISVALFQNVPIDVVPDG-SQRKRKRGRPRKDEN 180

[Close]
BLAST of CmaCh12G001600 vs. TAIR10
Match: AT1G22310.2 (AT1G22310.2 methyl-CPG-binding domain 8)

HSP 1 Score: 94.7 bits (234), Expect = 7.4e-20
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 1 

Query: 13  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSMSQSNNDDDVLIPKIDRSVFNES 72
           +R    +LP+ID RLLSQSEL  LS+ SS   SSS+S++ S   DD L PKIDRSVFNES
Sbjct: 19  NRLSAESLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNES 78

Query: 73  AGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGV 132
           AGSRKQT+ RLRLA R  Q P    S   + Q  D   EE  ++ +L + LF  +S+   
Sbjct: 79  AGSRKQTFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS- 138

Query: 133 NDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRK 187
            +  D+G+E+L       +  +  +SY ++    +D I       +S   IKR+RGRPRK
Sbjct: 139 KEEEDEGEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRK 192

[Close]
BLAST of CmaCh12G001600 vs. NCBI nr
Match: gi|449469855|ref|XP_004152634.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.6e-88
Identity = 184/225 (81.78%), Postives = 195/225 (86.67%), Query Frame = 1 

Query: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSS-SSSSMSQSNNDDDVLIP 60
           MASTTMV S S+D +RMN LPIIDLRLLSQSEL+CLSRFSSS SSSS SQSNN+DDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QF SSSSSSTIRPQSPDR D ESA+IV LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC VNDSY DGDEDLVLVNH YDESVP+SSYAIF SIPVD+IDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAANSISGCDK----RAEEDEIVMDLSALG 221
           RPRKDSNRF QSNGNAA    SGCDK     A ++EIVMD S+LG
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMDHSSLG 225

[Close]
BLAST of CmaCh12G001600 vs. NCBI nr
Match: gi|659088178|ref|XP_008444842.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 183/224 (81.70%), Postives = 195/224 (87.05%), Query Frame = 1 

Query: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSS-SSSSMSQSNNDDDVLIP 60
           MASTTMV S S+D +RMN LPIIDLRLLSQSEL+CLSRFSSS SSSS SQSNN+DDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QF SSSSSSTIRPQS DR D ESA+IV LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC VNDS+ DGDEDLVLVNH YDESVP+SSYAIF SIPVD+IDSS+APIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAANSISGCDK---RAEEDEIVMDLSALG 221
           RPRKDSNRF QSNGNAA    SG DK    A E+EIVMD S+LG
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLG 224

[Close]
BLAST of CmaCh12G001600 vs. NCBI nr
Match: gi|449469857|ref|XP_004152635.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-86
Identity = 180/219 (82.19%), Postives = 190/219 (86.76%), Query Frame = 1 

Query: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSS-SSSSMSQSNNDDDVLIP 60
           MASTTMV S S+D +RMN LPIIDLRLLSQSEL+CLSRFSSS SSSS SQSNN+DDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QF SSSSSSTIRPQSPDR D ESA+IV LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC VNDSY DGDEDLVLVNH YDESVP+SSYAIF SIPVD+IDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAANSISGCDK----RAEEDEIVM 215
           RPRKDSNRF QSNGNAA    SGCDK     A ++EIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]
BLAST of CmaCh12G001600 vs. NCBI nr
Match: gi|659088180|ref|XP_008444843.1| (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 2.1e-85
Identity = 179/218 (82.11%), Postives = 190/218 (87.16%), Query Frame = 1 

Query: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSS-SSSSMSQSNNDDDVLIP 60
           MASTTMV S S+D +RMN LPIIDLRLLSQSEL+CLSRFSSS SSSS SQSNN+DDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QF SSSSSSTIRPQS DR D ESA+IV LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC VNDS+ DGDEDLVLVNH YDESVP+SSYAIF SIPVD+IDSS+APIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAANSISGCDK---RAEEDEIVM 215
           RPRKDSNRF QSNGNAA    SG DK    A E+EIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]
BLAST of CmaCh12G001600 vs. NCBI nr
Match: gi|1009173325|ref|XP_015867756.1| (PREDICTED: uncharacterized protein LOC107405242 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 148.3 bits (373), Expect = 1.6e-32
Identity = 106/218 (48.62%), Postives = 135/218 (61.93%), Query Frame = 1 

Query: 1   MASTTMVASPSDD---RFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSMSQSNNDDDVL 60
           MASTT V  P+ D     ++++LP+IDL LLSQSELY LS   SSSSSS +    DDDVL
Sbjct: 1   MASTTTVLDPTADDHHSLQLDSLPLIDLNLLSQSELYSLS-LCSSSSSSHAHRRCDDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSP------------DR 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPR SQF SSSS+ +    SP            + 
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRNSQFASSSSARSAASSSPSFTRQTTTIAALEP 120

Query: 121 FDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIY--DESVPESSY--AIFHS 180
            D+E+ +I+ L KQLF  ++H           +DLV V   Y  D SV    +   + HS
Sbjct: 121 LDQENVQIIGLLKQLFASKTH-----------DDLVPVRVEYNDDSSVLHQPFNNNVVHS 180

Query: 181 IPVD-IIDSSYAPIKRRRGRPRKDSNRFAQ---SNGNA 196
           IP+D ++  + +  KR+RGRPRKD+N   +   SNG++
Sbjct: 181 IPIDVVVFDNTSQKKRKRGRPRKDANLAVENFYSNGSS 206

The following BLAST results are available for this feature:
BLAST of CmaCh12G001600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MBD8_ARATH1.3e-1843.17Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 P... [more]
BLAST of CmaCh12G001600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPH8_CUCSA1.7e-8682.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368980 PE=4 SV=1[more]
W9QJA1_9ROSA1.5e-2950.005'-adenylylsulfate reductase-like 4 OS=Morus notabilis GN=L484_003090 PE=4 SV=1[more]
M5XS88_PRUPE1.6e-2649.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016410mg PE=4 SV=1[more]
A0A151U8U6_CAJCA1.0e-2545.05Uncharacterized protein OS=Cajanus cajan GN=KK1_019812 PE=4 SV=1[more]
A0A0R0JF04_SOYBN2.7e-2345.25Uncharacterized protein OS=Glycine max GN=GLYMA_06G102900 PE=4 SV=1[more]
BLAST of CmaCh12G001600 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22310.27.4e-2043.17 methyl-CPG-binding domain 8[more]
BLAST of CmaCh12G001600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469855|ref|XP_004152634.1|1.6e-8881.78PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sa... [more]
gi|659088178|ref|XP_008444842.1|1.3e-8781.70PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis me... [more]
gi|449469857|ref|XP_004152635.1|2.5e-8682.19PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sa... [more]
gi|659088180|ref|XP_008444843.1|2.1e-8582.11PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me... [more]
gi|1009173325|ref|XP_015867756.1|1.6e-3248.62PREDICTED: uncharacterized protein LOC107405242 isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001600.1CmaCh12G001600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37701FAMILY NOT NAMEDcoord: 1..186
score: 4.9
NoneNo IPR availablePANTHERPTHR37701:SF1METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8coord: 1..186
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G001600Cla022100Watermelon (97103) v1cmawmB149
CmaCh12G001600Csa2G368980Cucumber (Chinese Long) v2cmacuB168
CmaCh12G001600MELO3C011031Melon (DHL92) v3.5.1cmameB165
CmaCh12G001600ClCG08G011160Watermelon (Charleston Gray)cmawcgB170
CmaCh12G001600CSPI02G21070Wild cucumber (PI 183967)cmacpiB169
CmaCh12G001600CmoCh12G001240Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G001600CmoCh05G005270Cucurbita moschata (Rifu)cmacmoB192
CmaCh12G001600Lsi08G009700Bottle gourd (USVL1VR-Ls)cmalsiB185
CmaCh12G001600Cp4.1LG11g04500Cucurbita pepo (Zucchini)cmacpeB172
CmaCh12G001600Cp4.1LG07g01390Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G001600MELO3C011031.2Melon (DHL92) v3.6.1cmamedB180
CmaCh12G001600CsaV3_2G029730Cucumber (Chinese Long) v3cmacucB0196
CmaCh12G001600Cla97C08G154130Watermelon (97103) v2cmawmbB195
CmaCh12G001600Bhi04G000631Wax gourdcmawgoB0197
CmaCh12G001600CsGy2G020790Cucumber (Gy14) v2cgybcmaB172
CmaCh12G001600Carg20537Silver-seed gourdcarcmaB0920
CmaCh12G001600Carg08191Silver-seed gourdcarcmaB0075
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G001600CmaCh05G005020Cucurbita maxima (Rimu)cmacmaB192
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G001600Watermelon (97103) v2cmawmbB165
CmaCh12G001600Wax gourdcmawgoB0219
CmaCh12G001600Cucumber (Gy14) v1cgycmaB0225
CmaCh12G001600Cucumber (Gy14) v1cgycmaB0448
CmaCh12G001600Wild cucumber (PI 183967)cmacpiB202
CmaCh12G001600Cucumber (Chinese Long) v2cmacuB199
CmaCh12G001600Melon (DHL92) v3.5.1cmameB186
CmaCh12G001600Watermelon (Charleston Gray)cmawcgB155
CmaCh12G001600Watermelon (97103) v1cmawmB167
CmaCh12G001600Bottle gourd (USVL1VR-Ls)cmalsiB164
CmaCh12G001600Cucumber (Gy14) v2cgybcmaB716
CmaCh12G001600Cucumber (Gy14) v2cgybcmaB722
CmaCh12G001600Melon (DHL92) v3.6.1cmamedB203
CmaCh12G001600Cucumber (Chinese Long) v3cmacucB0189
CmaCh12G001600Cucumber (Chinese Long) v3cmacucB0222
CmaCh12G001600Cucumber (Chinese Long) v3cmacucB0229