MELO3C010516 (gene) Melon (DHL92) v3.5.1

NameMELO3C010516
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGlutathione S-transferase family protein
Locationchr7 : 7738634 .. 7742086 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAACGTCCTTTCCAACAAAAATTTCTCACTTTTGCGCTTCAAAAAGACCCCATCGATTCCTCTCGACCCTTTTTCTGTGCTTTATCCGAGTGCAGAACAGTAACCCAACTGCGAATTTGAGGTCTCCAATGGTAATTATTTGTCTTTTTTCCTTTTTCTTTCCCTTTTCGTTTCTCTTTTTTATCCTCGTTCAGCCTTTAATGGTGGGTTTTAAGCTCTTTCTGCCTCGATTAAAGTGTAGAGCAGCTTCTATTTTCCTTCTTCTTCTTCTTCTTCTTCTTCACGTGCAACCCACGAATCTGAAAAGGTTTATTTATGTATATTTATTGATTTATTCTTTTTTTGCCTTTTTTTCTCTGTAGTTAGTTCGTTCAGCAGGATGCTTTCTGGGTCTCTGGCTTGAGGGTATGTGTAAATTGTTCTCATTTTGTTTTGGTTTTTCTATTTGAATTTGTTTATTTTGTTTGTGGGTTCTTTTCTTTTCTCTTTAATTCATAGTTTTTATGATTGTTGTTTGAATAACTGTTGGAATCTGACTATTGAGAAGTTTTTTTCTGGGTCTTGATTTGCCTGATTTTGGGTTGTTCTGAAATTCCTTTTTTGTTGTTGTTCTTTAATTTTTTTTGGAACTTACTTGTGACTTTTTGCCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCTCTTCTCTCACACTACATAATGAGTATTTTCTTATGTTATTTGTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTTCTCTCACACTACATAATGAGAATTTTCTTATGTATTTGTTGAAAATTGAGTAGAATGTTTGAGTTCAATTCCCTATGAATTGGTGAAACTTTCTGTAATGGCTTTAAATGCTGTGGAATTGAAGCTTGTTCAATGAGGTAATGACCTTTGGGAAAAGTAAAATGCAAATATGTGATTCCTGTGATTGTGACCGTTGCCTAACACTCTTTTGAGTCATTAATTCTTTACTAAAGTTGATCGGTGATTTAGCATGATATAGACTAGGAGATTTTATGTTCAACTCTTGCAATGTCACTTCCTCCCAATTCCCAAATTAATGTTGATTTCTACTTGTAGGGTTCTTTTACAAAATTTTCTGCAAGTGAGGGAAGAGTACAAGTGTTGTTGATATAATCTAATGTAGTAGCTTATCGGCTTAAGCCTTTGGATTTATTGTCGATCTAGCAGAAAGCTTTTGTTTAAGTATTTGTTCCACATACTAGTCATTGCTTTAAATTTTGTTGTTAACAATTGACATACTTGAAGAAAATTTTTCCAACCTTTGGTACTTTTAGTTAATAATATAATGGATATCTTCTTAATACCTTTTCGGGGCTTTCTCTATTTGTGTATTTTATATAATCCCATAGTTGTAGGTTACACTCAGTGGATGGAGCTCCATACAATTATAACTATTTTTTAATGGACTACTTGATTTGAGTTTTCATGCGTAATTTACCACCGTAAATAGGATTATGTTATTACTGGAACTTGACCTTCTACAGGGTATTTTTGAGTGTGTCTATGAAATGTTTCTGTTCCCATTGTACAATTAAAACTGAAAGAGTAATATGTTATTCTTATTGAAGAGTTCTGGTGTTGAATATTTTTCAAAAATTGACATCCCGAGTCAAAAAATTGATATCTGGCTTTGGTTTTCCTTGCTTCTCAGTGTATCAGTTTCCTTTTTGTCTATGGATTGGAACATCATTGATCCACGACTCCATGAATTCCTCATCTGATTCCTTTTCTTTTTTGGCAAATCGAGTTTTCTTTCTGAAAATCGTGGTTGATGATGATTATATTCTGTTACGGTCATTGTAGGATTTTAGCTTAACTTTTTCCCATGGATTCGGGGTGATTTGTTAAGCCATAAACCAAGAGGCAGTATCCAAGAACTGTCTTGAAATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAAGCATTGATTACACATCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCTTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTCTTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATGTCTTCCTTCTTAGTCCTTTGTTCTTACCTTTTTCATGCAATTTCCATATGCTTCATGAGATTAGCTGGAATAACTCACCTCATTAGGTTGACTCAAAAGGTTGTGGTTGTATAAATGAAAATAAGTGGGAATAATATGAATTACTTGTTATAGTTTTGTTTCTTTGGTTAACTCACTTCATTAGGTTCTTCTAGTGGTCTGTTTTTTTTCAGAACAATTGAAGATATCACCAAAGAATTAACAATTGAAGACAATGTACAATAATAATTTGTTGTAGTTTAACTGTCATAAAACTTGTACTATCAATCTTGAGGTTAGAGATTCGATTCTCTCACCTCACATGTTATCAAAAAAATAAAACTGCAAAACTAGCCGCTGCTAAACACCACCTTAGTAGTAAACTCTCCTCAGTGGCCATTTCTTTGTCGTAGTAAAAAACTGGCTAATATATGGATGTCACAAATCTGTTCAGGTATATAGAGAGAATTGCAATTGTCTCCTCAGGGACCGACGACATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTTTCCCATATCCCTGAGAAGTACCGCCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCGCTCGCATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTGAGAGAAGCGTACGACACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGACCATCTAGTTGCACTTCTTGACGAAGTTGAATCGAAACTAAGTGAAACTTCTTACTTAGCAGGGGAAGAGTTCACCATGGCTGATGCCATATTCATTCCAGTGCTGGCTCGACTCGAGCTATTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGACATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTCCTGAAAACTTGGTGCTTTATTCATATCAGAACCTTGCTGAGAAGATATTGATGGAAAATAATTATAAAGTCATAAAAGTTTTTTTTTTTTATATTTTTGTACATGAGGGAGAAGCTATAGGGGTAAAAGGCTAAGGTGTATCTATTTATTGCCATATTTTTTTACCTCCCTTTTTTGTTTTGTTTCATCAAATGTGTGTTGTATTGTGATTTTCATTTTTATTTCTTAT

mRNA sequence

GAGAGAACGTCCTTTCCAACAAAAATTTCTCACTTTTGCGCTTCAAAAAGACCCCATCGATTCCTCTCGACCCTTTTTCTGTGCTTTATCCGAGTGCAGAACAGTAACCCAACTGCGAATTTGAGGTCTCCAATGTTAGTTCGTTCAGCAGGATGCTTTCTGGGTCTCTGGCTTGAGGGATTTTAGCTTAACTTTTTCCCATGGATTCGGGGTGATTTGTTAAGCCATAAACCAAGAGGCAGTATCCAAGAACTGTCTTGAAATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAAGCATTGATTACACATCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCTTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTCTTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATATAGAGAGAATTGCAATTGTCTCCTCAGGGACCGACGACATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTTTCCCATATCCCTGAGAAGTACCGCCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCGCTCGCATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTGAGAGAAGCGTACGACACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGACCATCTAGTTGCACTTCTTGACGAAGTTGAATCGAAACTAAGTGAAACTTCTTACTTAGCAGGGGAAGAGTTCACCATGGCTGATGCCATATTCATTCCAGTGCTGGCTCGACTCGAGCTATTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGACATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTCCTGAAAACTTGGTGCTTTATTCATATCAGAACCTTGCTGAGAAGATATTGATGGAAAATAATTATAAAGTCATAAAAGTTTTTTTTTTTTATATTTTTGTACATGAGGGAGAAGCTATAGGGGTAAAAGGCTAAGGTGTATCTATTTATTGCCATATTTTTTTACCTCCCTTTTTTGTTTTGTTTCATCAAATGTGTGTTGTATTGTGATTTTCATTTTTATTTCTTAT

Coding sequence (CDS)

ATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAAGCATTGATTACACATCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCTTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTCTTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATATAGAGAGAATTGCAATTGTCTCCTCAGGGACCGACGACATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTTTCCCATATCCCTGAGAAGTACCGCCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCGCTCGCATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTGAGAGAAGCGTACGACACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGACCATCTAGTTGCACTTCTTGACGAAGTTGAATCGAAACTAAGTGAAACTTCTTACTTAGCAGGGGAAGAGTTCACCATGGCTGATGCCATATTCATTCCAGTGCTGGCTCGACTCGAGCTATTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGACATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTCCTGAAAACTTGGTGCTTTATTCATATCAGAACCTTGCTGAGAAGATATTGA
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47850melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010516T3MELO3C010516T3mRNA
MELO3C010516T2MELO3C010516T2mRNA
MELO3C010516T1MELO3C010516T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47850MU47850transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004045Glutathione S-transferase, N-terminalPFAMPF13417GST_N_3coord: 3..74
score: 2.0
IPR004045Glutathione S-transferase, N-terminalPROFILEPS50404GST_NTERcoord: 1..80
score: 1
IPR010987Glutathione S-transferase, C-terminal-likeGENE3DG3DSA:1.20.1050.10coord: 154..237
score: 9.7
IPR010987Glutathione S-transferase, C-terminal-likePROFILEPS50405GST_CTERcoord: 118..251
score: 12
IPR010987Glutathione S-transferase, C-terminal-likeunknownSSF47616GST C-terminal domain-likecoord: 136..242
score: 3.41
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 1..74
score: 1.4
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 1..74
score: 1.27
NoneNo IPR availablePANTHERPTHR11260GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAININGcoord: 149..239
score: 5.7E-124coord: 1..117
score: 5.7E
NoneNo IPR availablePANTHERPTHR11260:SF274GLUTATHIONE S-TRANSFERASE TCHQDcoord: 1..117
score: 5.7E-124coord: 149..239
score: 5.7E
NoneNo IPR availablePFAMPF13410GST_C_2coord: 162..224
score: 1.