Cucsa.018410 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCAAAACAGTAACCCAGTTGCGAATTCGAGGTCTTCAATGGTAATTATTTGTCTTTTTtCTTTTTCTTTCCCTTTTCGTTTCTCTTTTTtATCCTCGTTCACCCTTTAACTGTGGGTTTTAAGCTCTTTCTGCCTCGATTGTGGTGTAGAACAGCTTCTATTTTCCTTTTtCTTCTTCTTCTTCTTCTTCTTCTTCTTCACGTGCAACCCACGAATCTGAAAAGCTTTATTTATGTATATTTATTGATTTTTTTATTTGTTCTTTTTTGCCTTTTCTTCTCTGTAGTTTGTTCCTTCAGCTGGATGTTATCTGGGTCTCTGGCTTGAGGGTATGTGTAAATTGTTCGCATTTTGTTTTGGTGTTTCTATTTGAATTTGTTGATTTTGTTTGTGGGTTTTTTTtCTTTTCTCCTTAATTCATAGTTTTTATGATTGTTGTTTGAATAACTGTTGGAATCTGAGTATTGAGAAGTTCTTATCTGGGTCTTGATTTGCCTGATTTTGGGGTGTTCTGAAATTCCTTTTTtGTTGTTGTTCTTTAATTTTTTTTtGGAACTTAATTGTGACTTTTGCCTCTCTCTCTCCTCTTCTCTCACACTACATAATGAGAATTTTCTTGTGTAATTGTTGAAAATTGAGTAGAATGTTTGAGTCCAATTCCCTATGAATCGATGCAACTTTCTGTAATGGCTTTAAATGCTGTGGAATTGAAGCTTGTACAATGAGGTATTGACCTTTGGGAAAAGTAAAATGCAAATATGTGATTCTTATGATTGTGACCGTTGCCTAACACTCTTTGAGTCATTAATTCTTTACCAAAGGTGATTGGTGATTTAGCATGATATAGACTAGGAGATTTTATGTTCCACCTGCAATGTCACTACCTCCAAGTCCCAAATTAATATTGATTTCCACTTGCAGGGTTCTTTTACAAAATTTTCTGCAAGGGAGTGAAGAGTACAAGTGTTGATATAATCTAATGTATAGTAACTTATCAGCTTAAGCCTTTGGGTTTATTGTCGATTTAGCAGAAAGCTTTTATTTAACTTTTTtCCCCACATACTCGTCATTGCTTTAAATTTTGTTGTTAACAATTAACATACTTGAAGAAAATTTTGCCAACCTTTGGTACTTTCAGTTAATAATATAATGGATATTTTCTTAATACCTTTTCGGGGCTTTCTGTATTTGTGTTATATAATCCTATAGTTGTAGATTACACTTAGTGGATGGAGCTCCATACAACTATAACTATTTTTTAATGAACTACTTGATTTGAGTTTTCATACTTAATTTACCACAGTAAATAGGATTATATTATTACTGGGACTTGACCTTCTACAGGTTTTGGGTGTCACCATGAAATAGTTGTTTCTGTTCCCATTGTACAATTAAAACTGAAAGAGTAATATGTTTTTCTTATTGAAGAGTTCTGGTGTTGAATATTTTTCAAAAATTGACATCCCGATTCTAAAAATTGATATCAGGCTTTGGTTTCTTTTTGCTTCTTAGTGTATCAGTTTCCTTTTGTGTCTGTGGATTGGAACTTCATTGATCCATGACTCCATGAATTCCTCATCTGATTTTCATTGTTTTtCTTTTTtGGCAAATCGATTTTTCTTTTTGAAAATCGTGGTTGATGATGATTATATTCTCTTACTGTCATTGTAGGGTTTTAGCTTAACCTTTTCCTGTGGATTCGGTGTGATTTGCTAAGCCATAAACCAAGAGGCATTATTCAAGTACTGTCTTGAAATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAGAGCATTGATTACACGTCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTATTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATGTGTTCCTTCTTAGTCCTTTGTTCTTAAATCTTACCTTTTTCATGCAATTTCCATATGCTTCATGAGATTAGCTGGAATAACTAACTTCATTAGGTTGACTCGAAAGGTTGTGGTTGTATAAATAAAAGTAAGTGGAAATAATATGAATTACTTGTTGTAGTTTTGTTTCTTAGGTTAACTCACTTCATTAGGTTCTTCTAGTGGTCTGTTTTTTTTTtCAGAACAATTGAAGATATCACCAAAGAATTAACAATTGAAGACATTGTACAATAGTTTTTTGTCAATTTCTAAAAaCCATTATCCAAATAACTGTAAAACTATTGTCAAAATAAACATAGTAAAACTATCATAAAACTTGTACTATCAACCTTGAGGTTAGAGATTCGATTCTCTCACCTCACATGTTATCAGAAAAaTAAAACTGTAAAACTAGCTGCTGCTAAACACCTCCTCAGTGGCCGATGTAGTCAAGAACCGGCTAATATATGGATGTCACAAATCTGTTCAGGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGACGAGATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATATTTCACTCTTGCCCATATCCCTGAAAAGTACCGTCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCTCTCGGATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGATCATCTAGTTGCACTTCTCGATGAAATCGAATTGAAACTAAGCGAGACTTCTTACATAGCAGGGGAAGAGTTCACCATGGCTGATGCCGTATTCATTCCAGTGCTGGCTCGACTCGAGCTGTTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTTCAGAGTATTGGATATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTGCTGAGAAGATATTGATGGAAAAaTAATTATAGTCATAAAAGTTTATTTGTATTTTTGTACATGAGGGAGAAGCTATTGGGGTGAAAGGGTAAGTGTATCTATCTATTTGTTGCCATTTTTTtACCTCCCTTTTTTtGTTTTGTTTCATAAAATGTGTGTTGTATTGTGATTCTCATTTTTATTTCTTATTGGACAGAGGATTGGAGGTTGAATCTTGATTTTGGATTTCCCAAA TGCAAAACAGTAACCCAGTTGCGAATTCGAGGTCTTCAATGTTTGTTCCTTCAGCTGGATGTTATCTGGGTCTCTGGCTTGAGGGGTTTTAGCTTAACCTTTTCCTGTGGATTCGGTGTGATTTGCTAAGCCATAAACCAAGAGGCATTATTCAAGTACTGTCTTGAAATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAGAGCATTGATTACACGTCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTATTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGACGAGATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATATTTCACTCTTGCCCATATCCCTGAAAAGTACCGTCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCTCTCGGATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGATCATCTAGTTGCACTTCTCGATGAAATCGAATTGAAACTAAGCGAGACTTCTTACATAGCAGGGGAAGAGTTCACCATGGCTGATGCCGTATTCATTCCAGTGCTGGCTCGACTCGAGCTGTTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTTCAGAGTATTGGATATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTGCTGAGAAGATATTGATGGAAAAATAATTATAGTCATAAAAGTTTATTTGTATTTTTGTACATGAGGGAGAAGCTATTGGGGTGAAAGGGTAAGTGTATCTATCTATTTGTTGCCATTTTTTTACCTCCCTTTTTTTGTTTTGTTTCATAAAATGTGTGTTGTATTGTGATTCTCATTTTTATTTCTTATTGGACAGAGGATTGGAGGTTGAATCTTGATTTTGGATTTCCCAAA ATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAGAGCATTGATTACACGTCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTATTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGACGAGATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATATTTCACTCTTGCCCATATCCCTGAAAAGTACCGTCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCTCTCGGATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGATCATCTAGTTGCACTTCTCGATGAAATCGAATTGAAACTAAGCGAGACTTCTTACATAGCAGGGGAAGAGTTCACCATGGCTGATGCCGTATTCATTCCAGTGCTGGCTCGACTCGAGCTGTTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTTCAGAGTATTGGATATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTGCTGAGAAGATATTGA MQLYHHPYSLDSQKVRLALEEQSIDYTSYHVNPITAKNMDSSFFKINPSAKLPVFQNGSHIIFDTIEIIQYIERIAVVSSGTDEIMPSSREVVEWMHKIQEWNPKYFTLAHIPEKYRLTVTRFIRRVVISRMAETPEMAAAYHRKLREAYETEDKLKNKSVVKQSTDHLVALLDEIELKLSETSYIAGEEFTMADAVFIPVLARLELLKLADEYIGSRPNISEYWILVQQRPSYKKVIGKYFKGWRKHKTLLKTWCFVHIRTLLRRY*
BLAST of Cucsa.018410 vs. Swiss-Prot
Match: TCHQD_ARATH (Glutathione S-transferase TCHQD OS=Arabidopsis thaliana GN=TCHQD PE=2 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.2e-106 Identity = 183/267 (68.54%), Postives = 228/267 (85.39%), Query Frame = 1
BLAST of Cucsa.018410 vs. Swiss-Prot
Match: PCPC_SPHCR (Tetrachloro-P-hydroquinone reductive dehalogenase OS=Sphingobium chlorophenolicum GN=pcpC PE=1 SV=3) HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16 Identity = 58/238 (24.37%), Postives = 114/238 (47.90%), Query Frame = 1
BLAST of Cucsa.018410 vs. Swiss-Prot
Match: GDAP1_HUMAN (Ganglioside-induced differentiation-associated protein 1 OS=Homo sapiens GN=GDAP1 PE=1 SV=3) HSP 1 Score: 82.4 bits (202), Expect = 8.2e-15 Identity = 67/270 (24.81%), Postives = 121/270 (44.81%), Query Frame = 1
BLAST of Cucsa.018410 vs. Swiss-Prot
Match: GDAP1_MOUSE (Ganglioside-induced differentiation-associated protein 1 OS=Mus musculus GN=Gdap1 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 67/270 (24.81%), Postives = 120/270 (44.44%), Query Frame = 1
BLAST of Cucsa.018410 vs. Swiss-Prot
Match: GDAP1_BOVIN (Ganglioside-induced differentiation-associated protein 1 OS=Bos taurus GN=GDAP1 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 67/270 (24.81%), Postives = 121/270 (44.81%), Query Frame = 1
BLAST of Cucsa.018410 vs. TrEMBL
Match: A0A0A0KYI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G358760 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 1.0e-149 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.018410 vs. TrEMBL
Match: B9S2T7_RICCO (Ganglioside-induced differentiation-associated protein 1, 2 gdap, putative OS=Ricinus communis GN=RCOM_0561800 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 2.9e-120 Identity = 206/267 (77.15%), Postives = 243/267 (91.01%), Query Frame = 1
BLAST of Cucsa.018410 vs. TrEMBL
Match: A0A067KM38_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12156 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 3.8e-120 Identity = 211/267 (79.03%), Postives = 243/267 (91.01%), Query Frame = 1
BLAST of Cucsa.018410 vs. TrEMBL
Match: V4SII9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002166mg PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 3.6e-118 Identity = 203/267 (76.03%), Postives = 241/267 (90.26%), Query Frame = 1
BLAST of Cucsa.018410 vs. TrEMBL
Match: B9H7I9_POPTR (TCHQD class glutathione transferase TCHOD1 OS=Populus trichocarpa GN=POPTR_0005s20450g PE=2 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 5.2e-117 Identity = 205/267 (76.78%), Postives = 237/267 (88.76%), Query Frame = 1
BLAST of Cucsa.018410 vs. TAIR10
Match: AT1G77290.1 (AT1G77290.1 Glutathione S-transferase family protein) HSP 1 Score: 387.5 bits (994), Expect = 6.7e-108 Identity = 183/267 (68.54%), Postives = 228/267 (85.39%), Query Frame = 1
BLAST of Cucsa.018410 vs. TAIR10
Match: AT4G02520.1 (AT4G02520.1 glutathione S-transferase PHI 2) HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13 Identity = 57/237 (24.05%), Postives = 107/237 (45.15%), Query Frame = 1
BLAST of Cucsa.018410 vs. TAIR10
Match: AT2G02930.1 (AT2G02930.1 glutathione S-transferase F3) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 58/238 (24.37%), Postives = 108/238 (45.38%), Query Frame = 1
BLAST of Cucsa.018410 vs. TAIR10
Match: AT1G02920.1 (AT1G02920.1 glutathione S-transferase 7) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 57/241 (23.65%), Postives = 107/241 (44.40%), Query Frame = 1
BLAST of Cucsa.018410 vs. TAIR10
Match: AT1G02930.1 (AT1G02930.1 glutathione S-transferase 6) HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10 Identity = 57/241 (23.65%), Postives = 104/241 (43.15%), Query Frame = 1
BLAST of Cucsa.018410 vs. NCBI nr
Match: gi|449449773|ref|XP_004142639.1| (PREDICTED: glutathione S-transferase TCHQD [Cucumis sativus]) HSP 1 Score: 537.3 bits (1383), Expect = 1.5e-149 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.018410 vs. NCBI nr
Match: gi|659086976|ref|XP_008444209.1| (PREDICTED: glutathione S-transferase TCHQD [Cucumis melo]) HSP 1 Score: 522.3 bits (1344), Expect = 4.9e-145 Identity = 253/267 (94.76%), Postives = 265/267 (99.25%), Query Frame = 1
BLAST of Cucsa.018410 vs. NCBI nr
Match: gi|1000963731|ref|XP_015575345.1| (PREDICTED: glutathione S-transferase TCHQD isoform X1 [Ricinus communis]) HSP 1 Score: 439.5 bits (1129), Expect = 4.2e-120 Identity = 206/267 (77.15%), Postives = 243/267 (91.01%), Query Frame = 1
BLAST of Cucsa.018410 vs. NCBI nr
Match: gi|802637636|ref|XP_012078325.1| (PREDICTED: glutathione S-transferase TCHQD [Jatropha curcas]) HSP 1 Score: 439.1 bits (1128), Expect = 5.5e-120 Identity = 211/267 (79.03%), Postives = 243/267 (91.01%), Query Frame = 1
BLAST of Cucsa.018410 vs. NCBI nr
Match: gi|567883469|ref|XP_006434293.1| (hypothetical protein CICLE_v10002166mg [Citrus clementina]) HSP 1 Score: 432.6 bits (1111), Expect = 5.1e-118 Identity = 203/267 (76.03%), Postives = 241/267 (90.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |