Carg00311 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTTTTGTGTTCTTTGTTTCTTCTTCTTCTTCTTCACGTGCTCCCCACGAATCTGAAAAGAGATGTGTTTCTTTATCGATTTTCCTTTTGGTTTTCTTCTTGTTCTTCAGGTTTCCGAAGAATCGCATGGCTTCTGGCTCTCTGGTGTGAGCGTATGTTCTTATTTTGCCCTTAATTTCCTGTTTTAGGGTTCTTATTGAATCGTTTTTGGAATCTGATTGTGAAGATTATTATATCCGAGTCTTGTTTGCTTGTTTGTGTTCTTTACATGATTATGTAGAATCCTTTATATGAGGTACTTGATTTGATTATTTGAGTTTTGATGATTTCTTTGTCAAAGTAAAATAGGATTGTTTGATTACAAGAACTTCATGTTTTAGAAGATGGTTGTGGCTATCAAATTGTTGTTTCTGTTCACATTGTTGCATTGAATCTGAATGAGTGAAGTGTTGATCTGAAGTTCTTAAGAAGTGATGTTGCAGGCGGTATCTCGTTTTGTTTAGACATTGCTTAGCGTAAACTAGTATCGGGATCCGTTTTTTCTTGGTTCTTAGTGTAATAGTGTGAGATCTCACATTGGTTGGAGAGGGATACGAAGCATTGTTGATAAGGGTGTGGAAACCTCTTCCTAATAGATGTGTTGTAGATACCGTAAGGCTGAGGTGATACGTAATGGACCAAAATGGACAATATCTGTTAGTGGTGGGCTTGAGCTTTTACAAATGGTATCAGAGCCAGATACCGGGCGGTGTGCTAGTGAGGACGTTGGGTCCCTGAGGGGGGTGGATTGTGAGATCCCATATTAGTTGGAGATGGGAACGAAGCATGCTTATAAGGGTGTGGGAACCTCTCCCTAGTAGATGTGTTTTAAAAACTGTGAGGATAACGGCGATATGTAATGAGTCAAAACGGACGATGTTTGCTAGCGGTGGGCTTGAGCCGTTACAAATGGTATCAAAGCCAGACACTGGGTGGTGTGCTAGTGAGGATGCAGGGTCCCTAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGATGGAAACGAAACGTTCCTTCTAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAAACTGTGAGGCTAACAGTGATACGTAACGGACCAAAACGGACAAGAGTCAGACACCAGGCAGTGTGCTAGCAAGGACGCTGGGCTTCCAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGAAGAGGGAAACGAAGCATTTCTTATAAGGGTGTGGACACCTCTTTCTAATAAACGTGTTTTAAAAACCGTGAGGCTGACGGCGCCAAAACGGAGACAGTATCTACTAGTGGTGGGCTTGGACGGTTACGATGAGTGTGCATATGAATAGGAACATCTTTGGCATATGAGTCTATGAGTTCCTCGTTTGATTTTCATCATCTTTCTATTATGGAAACTCGAGTTTTCTTTGATGTTGATTGCTTTCCTCAACGGTCATTGCAGGCTTTCGAGTCGACGTTTTCCTGTAGATCCCACGCGAACTTTTGAGCCATAAACCAAGAGCCAGTACTCCAAGTACTCTCTTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCATGTCATTTTCGACACGATCGAGATAATTCAGTACGTCTTGCTTGCTCCTTACTCTTTTGTCCCTACACTTTTTATGTTCATGAGATTGGCTGGAATAACTCACATCATTCAGTTGAAGAGAGGGCGTGAAAACCTCTCTCTAACAAAAGCGTTTTAAAGTCACTAACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTAGGCTTCGACTGTTACAAATGGTATCAGAGCCAGACACTGGGCGGTGTGCGAGCGAGGACGTTGAGCCACCAAGGAGGGTGGATTGTGAGATCCCATATCGGTTGGAGAGGGGAACAAAGCATTTTTTATAAGAGTGTGGAAACCTCTCCCTAACAAACGCATTTTACAACCGTGAGGCTGACGGTGATACGTAATAGGCCAAAGCGGATAATATCTGCTAGCAATGGCTTGGGCTGTTACAAATAGTATCAGAACCAGACACTGGACGGTGTGCCAACGAAGACGTTGGGCCCCCAAGTAGAGTGGATGGCGAGATCCCACGTCGGTTAGAGAGGGGAACAACATTCTTTACAAGGATATGGAAACCTTTCCCTAACAGACCCGTTTTAAAATCGTGAGGCTGATGACATTACGTAACGGGCCAAAGCATACAATATCTGCTAATGGTGGGCTTGGGCCAAAGTAGACAATATCTACTAACGGTCCAACCCGGCTATATATCTTTCTAAACTAATGTTCGTAATGTACTGATGGCTCTATTCAGGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCAACGACGTAACGCCGAGTAGCCAAGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTCGCCCACGTCCCCGAGAAGTACCGACTTACCGTTACCAAATTTATAAGGCGTGTCGTTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCTTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGCAGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA GCTTTTGTGTTCTTTGTTTCTTCTTCTTCTTCTTCACGTGCTCCCCACGAATCTGAAAAGAGATGTGTTTCTTTATCGATTTTCCTTTTGGTTTTCTTCTTGTTCTTCAGGTTTCCGAAGAATCGCATGGCTTCTGGCTCTCTGGTGTGAGCGCTTTCGAGTCGACGTTTTCCTGTAGATCCCACGCGAACTTTTGAGCCATAAACCAAGAGCCAGTACTCCAAGTACTCTCTTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCATGTCATTTTCGACACGATCGAGATAATTCACGTTTTAAAGTCACTAACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTAGGCTTCGACTGTTACAAATGGTATCAGAGCCAGACACTGGGCGGTGTGCGAGCGAGGACGTTGAGCCACCAAGGAGGGTGGATTGTGAGATCCCATATCGGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCAACGACGTAACGCCGAGTAGCCAAGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTCGCCCACGTCCCCGAGAAGTACCGACTTACCGTTACCAAATTTATAAGGCGTGTCGTTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCTTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGCAGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCATGTCATTTTCGACACGATCGAGATAATTCACGTTTTAAAGTCACTAACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTAGGCTTCGACTGTTACAAATGGTATCAGAGCCAGACACTGGGCGGTGTGCGAGCGAGGACGTTGAGCCACCAAGGAGGGTGGATTGTGAGATCCCATATCGGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCAACGACGTAACGCCGAGTAGCCAAGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTCGCCCACGTCCCCGAGAAGTACCGACTTACCGTTACCAAATTTATAAGGCGTGTCGTTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCTTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGCAGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIHVLKSLTVIRNGPKRTISASGRLRLLQMVSEPDTGRCASEDVEPPRRVDCEIPYRYIERIAVVSSGTNDVTPSSQEVVEWMHKIQQWNPKFFTLAHVPEKYRLTVTKFIRRVVISRMAETPEMAAAYHHKLREAYETEDKLKNKTVIKQSTDHLVRLLDEIESKLGETAFLAGEEFTMADAVLIPVLARLELLKVADEYIGSSSSRPNIAEYWMLVQQRPSYKKVIGKYFKGWRKHKTLMKTWCFLHIRTLLRRY
BLAST of Carg00311 vs. NCBI nr
Match: XP_023525288.1 (glutathione S-transferase TCHQD-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140 Identity = 266/324 (82.10%), Postives = 267/324 (82.41%), Query Frame = 0
BLAST of Carg00311 vs. NCBI nr
Match: XP_022941031.1 (glutathione S-transferase TCHQD-like [Cucurbita moschata]) HSP 1 Score: 503.8 bits (1296), Expect = 4.3e-139 Identity = 265/324 (81.79%), Postives = 266/324 (82.10%), Query Frame = 0
BLAST of Carg00311 vs. NCBI nr
Match: XP_022981040.1 (glutathione S-transferase TCHQD-like [Cucurbita maxima]) HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138 Identity = 261/324 (80.56%), Postives = 266/324 (82.10%), Query Frame = 0
BLAST of Carg00311 vs. NCBI nr
Match: XP_008444209.1 (PREDICTED: glutathione S-transferase TCHQD [Cucumis melo] >XP_008444210.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis melo] >XP_008444211.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 7.6e-128 Identity = 238/324 (73.46%), Postives = 260/324 (80.25%), Query Frame = 0
BLAST of Carg00311 vs. NCBI nr
Match: XP_004142639.1 (PREDICTED: glutathione S-transferase TCHQD [Cucumis sativus] >XP_004142640.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis sativus] >XP_011653774.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis sativus] >KGN54538.1 hypothetical protein Csa_4G358760 [Cucumis sativus]) HSP 1 Score: 463.4 bits (1191), Expect = 6.4e-127 Identity = 238/324 (73.46%), Postives = 260/324 (80.25%), Query Frame = 0
BLAST of Carg00311 vs. TAIR10
Match: AT1G77290.1 (Glutathione S-transferase family protein) HSP 1 Score: 355.1 bits (910), Expect = 4.5e-98 Identity = 184/324 (56.79%), Postives = 230/324 (70.99%), Query Frame = 0
BLAST of Carg00311 vs. TAIR10
Match: AT1G02920.1 (glutathione S-transferase 7) HSP 1 Score: 50.1 bits (118), Expect = 3.1e-06 Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of Carg00311 vs. TAIR10
Match: AT3G62760.1 (Glutathione S-transferase family protein) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 28/105 (26.67%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Carg00311 vs. TAIR10
Match: AT1G02930.1 (glutathione S-transferase 6) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05 Identity = 29/87 (33.33%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of Carg00311 vs. TAIR10
Match: AT1G02940.1 (glutathione S-transferase (class phi) 5) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 25/75 (33.33%), Postives = 39/75 (52.00%), Query Frame = 0
BLAST of Carg00311 vs. Swiss-Prot
Match: sp|O80662|TCHQD_ARATH (Glutathione S-transferase TCHQD OS=Arabidopsis thaliana OX=3702 GN=TCHQD PE=2 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 8.0e-97 Identity = 184/324 (56.79%), Postives = 230/324 (70.99%), Query Frame = 0
BLAST of Carg00311 vs. Swiss-Prot
Match: sp|A6QQZ0|GDAP1_BOVIN (Ganglioside-induced differentiation-associated protein 1 OS=Bos taurus OX=9913 GN=GDAP1 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.7e-09 Identity = 73/312 (23.40%), Postives = 131/312 (41.99%), Query Frame = 0
BLAST of Carg00311 vs. Swiss-Prot
Match: sp|O88741|GDAP1_MOUSE (Ganglioside-induced differentiation-associated protein 1 OS=Mus musculus OX=10090 GN=Gdap1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.8e-09 Identity = 73/312 (23.40%), Postives = 130/312 (41.67%), Query Frame = 0
BLAST of Carg00311 vs. Swiss-Prot
Match: sp|Q8TB36|GDAP1_HUMAN (Ganglioside-induced differentiation-associated protein 1 OS=Homo sapiens OX=9606 GN=GDAP1 PE=1 SV=3) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08 Identity = 72/312 (23.08%), Postives = 131/312 (41.99%), Query Frame = 0
BLAST of Carg00311 vs. Swiss-Prot
Match: sp|Q03520|PCPC_SPHCR (Tetrachloro-P-hydroquinone reductive dehalogenase OS=Sphingobium chlorophenolicum OX=46429 GN=pcpC PE=1 SV=3) HSP 1 Score: 61.2 bits (147), Expect = 2.4e-08 Identity = 65/296 (21.96%), Postives = 117/296 (39.53%), Query Frame = 0
BLAST of Carg00311 vs. TrEMBL
Match: tr|A0A1S3BAL6|A0A1S3BAL6_CUCME (glutathione S-transferase TCHQD OS=Cucumis melo OX=3656 GN=LOC103487615 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 5.0e-128 Identity = 238/324 (73.46%), Postives = 260/324 (80.25%), Query Frame = 0
BLAST of Carg00311 vs. TrEMBL
Match: tr|A0A0A0KYI5|A0A0A0KYI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358760 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 4.2e-127 Identity = 238/324 (73.46%), Postives = 260/324 (80.25%), Query Frame = 0
BLAST of Carg00311 vs. TrEMBL
Match: tr|A0A2P5CGI6|A0A2P5CGI6_PARAD (S-crystallin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_154630 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 2.0e-108 Identity = 203/324 (62.65%), Postives = 241/324 (74.38%), Query Frame = 0
BLAST of Carg00311 vs. TrEMBL
Match: tr|A0A2P5F192|A0A2P5F192_9ROSA (S-crystallin OS=Trema orientalis OX=63057 GN=TorRG33x02_126030 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 2.6e-108 Identity = 203/324 (62.65%), Postives = 242/324 (74.69%), Query Frame = 0
BLAST of Carg00311 vs. TrEMBL
Match: tr|B9S2T7|B9S2T7_RICCO (Ganglioside-induced differentiation-associated protein 1, 2 gdap, putative OS=Ricinus communis OX=3988 GN=RCOM_0561800 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 4.4e-108 Identity = 202/324 (62.35%), Postives = 248/324 (76.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |