MELO3C010210 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010210
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransmembrane amino acid transporter family protein
Locationchr2 : 14606407 .. 14607240 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAGGGCTATTGATTTTGTTCCTCTTCTCCATTCTCTGCCTCTATCTTCTTCCATTTTGCCTATGCGAAACCAATTTCACTACCAAAGCTGATGATCATGATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGGTAACAAATCTAACTATCTTTTGAATTTTTCACTTGAGGCGCATGTTTGGTTTAGCTTTTCATGTGTTTGATGTTGAAAATAAGTCACTTTTAAAAAAAGAAAAAATTAGAGTGTCGGACAAGCACTTAAATAACTTTTAAAAAACTTTGTGCTGCTCAGACGAACGAACTACCAACTTGGAGTTGGTGGAATGAGTTATTATAGCTCAGTCCATCTTTGGAACTTCAAATACTATTATTGTTTAAAATGCCTTTTTACTACAATATTTACTACTTTTCAAAGTTCATATTATTTTCTACTCATTCTCTCCTTGGTACAGTGTTTATTATTTTCTATTTTCTACCTAGTATGCATCCCGAATAATATAGTATGCATTGCAAATACATACTATAATAATAACTCAATGTCCCAAACATCATTTAAATAAGAAATAACTTTTCGAAAAACATTTTTTCCCTGATCAATTTAAAGTGTCGTAGGATCCACAGATTTACAGGGCAGTGAAGAATTACATGGTGGAGCAGCTGTGGTGACGGTTATGCGAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCACCACGGCCGCTCCAAGAATGATGCTAACTCTTTACGGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTATTGTCAAAGGTTTTTAA

mRNA sequence

ATGAAGAAAGGGCTATTGATTTTGTTCCTCTTCTCCATTCTCTGCCTCTATCTTCTTCCATTTTGCCTATGCGAAACCAATTTCACTACCAAAGCTGATGATCATGATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGGATCCACAGATTTACAGGGCAGTGAAGAATTACATGGTGGAGCAGCTGTGGTGACGGTTATGCGAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCACCACGGCCGCTCCAAGAATGATGCTAACTCTTTACGGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTATTGTCAAAGGTTTTTAA

Coding sequence (CDS)

ATGAAGAAAGGGCTATTGATTTTGTTCCTCTTCTCCATTCTCTGCCTCTATCTTCTTCCATTTTGCCTATGCGAAACCAATTTCACTACCAAAGCTGATGATCATGATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGGATCCACAGATTTACAGGGCAGTGAAGAATTACATGGTGGAGCAGCTGTGGTGACGGTTATGCGAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCACCACGGCCGCTCCAAGAATGATGCTAACTCTTTACGGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTATTGTCAAAGGTTTTTAA

Protein sequence

MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHGGAAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVKGF*
Homology
[Close]
BLAST of MELO3C010210 vs. TrEMBL
Match: A0A0A0LW17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257310 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-51
Identity = 102/117 (87.18%), Postives = 109/117 (93.16%), Query Frame = 1 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHGG 60
           MKKGLL+LFLFSI+ LYLLPFCLCETNFTTKADDH+KQLKQGRPRK   D+Q SEELHGG
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRK---DVQSSEELHGG 60

Query: 61  AAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVKGF 118
           A+V TVMRAKAVYGGANDIHHG SKNDANSL IKSISSLVWKVSFGFLGFC++VKGF
Sbjct: 61  ASVATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

[Close]
BLAST of MELO3C010210 vs. NCBI nr
Match: gi|449457873|ref|XP_004146672.1| (PREDICTED: uncharacterized protein LOC101207763 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 5.3e-51
Identity = 102/117 (87.18%), Postives = 109/117 (93.16%), Query Frame = 1 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHGG 60
           MKKGLL+LFLFSI+ LYLLPFCLCETNFTTKADDH+KQLKQGRPRK   D+Q SEELHGG
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRK---DVQSSEELHGG 60

Query: 61  AAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVKGF 118
           A+V TVMRAKAVYGGANDIHHG SKNDANSL IKSISSLVWKVSFGFLGFC++VKGF
Sbjct: 61  ASVATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

The following BLAST results are available for this feature:
BLAST of MELO3C010210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW17_CUCSA3.7e-5187.18Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257310 PE=4 SV=1[more]
BLAST of MELO3C010210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457873|ref|XP_004146672.1|5.3e-5187.18PREDICTED: uncharacterized protein LOC101207763 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51226melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010210T1MELO3C010210T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51226MU51226transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010210Csa1G257310Cucumber (Chinese Long) v2cumeB060
MELO3C010210Cla018744Watermelon (97103) v1mewmB293
MELO3C010210ClCG06G012510Watermelon (Charleston Gray)mewcgB258
MELO3C010210Cla97C06G121740Watermelon (97103) v2mewmbB265
MELO3C010210Bhi02G000672Wax gourdmewgoB290
MELO3C010210CSPI01G17830Wild cucumber (PI 183967)cpimeB057
MELO3C010210CmaCh10G004610Cucurbita maxima (Rimu)cmameB058
MELO3C010210CmoCh10G004950Cucurbita moschata (Rifu)cmomeB049
MELO3C010210Lsi06G011430Bottle gourd (USVL1VR-Ls)lsimeB402
MELO3C010210Cp4.1LG18g05870Cucurbita pepo (Zucchini)cpemeB334
MELO3C010210Carg10002Silver-seed gourdcarmeB0131
MELO3C010210CsaV3_1G029090Cucumber (Chinese Long) v3cucmeB054
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010210Watermelon (97103) v2mewmbB259
MELO3C010210Wax gourdmewgoB266
MELO3C010210Melon (DHL92) v3.5.1memeB108
MELO3C010210Melon (DHL92) v3.5.1memeB116
MELO3C010210Cucurbita moschata (Rifu)cmomeB098
MELO3C010210Cucumber (Gy14) v1cgymeB101
MELO3C010210Cucumber (Gy14) v1cgymeB304
MELO3C010210Cucumber (Gy14) v1cgymeB452
MELO3C010210Cucurbita maxima (Rimu)cmameB105
MELO3C010210Cucurbita maxima (Rimu)cmameB154
MELO3C010210Cucurbita moschata (Rifu)cmomeB144
MELO3C010210Wild cucumber (PI 183967)cpimeB112
MELO3C010210Wild cucumber (PI 183967)cpimeB279
MELO3C010210Cucumber (Chinese Long) v2cumeB113
MELO3C010210Cucumber (Chinese Long) v2cumeB289
MELO3C010210Watermelon (Charleston Gray)mewcgB253
MELO3C010210Watermelon (97103) v1mewmB278
MELO3C010210Cucurbita pepo (Zucchini)cpemeB621
MELO3C010210Cucurbita pepo (Zucchini)cpemeB752
MELO3C010210Bottle gourd (USVL1VR-Ls)lsimeB104
MELO3C010210Bottle gourd (USVL1VR-Ls)lsimeB404
MELO3C010210Cucumber (Gy14) v2cgybmeB049
MELO3C010210Cucumber (Gy14) v2cgybmeB057
MELO3C010210Cucumber (Gy14) v2cgybmeB097
MELO3C010210Silver-seed gourdcarmeB0509
MELO3C010210Silver-seed gourdcarmeB0898
MELO3C010210Cucumber (Chinese Long) v3cucmeB118
MELO3C010210Cucumber (Chinese Long) v3cucmeB285