MELO3C009681.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009681.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	At3g57450
Location	chr04 : 30244009 .. 30244642 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCTTCTCCATTCCCTTTCTCTCTCATCATCACAAAACCAAAAAATCAAAAGTAGAGAAAGTCCGATCAATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTTGATGATTTTGATTCGATTTAGGGATTTTTCTTTTCTTTTTGTGTAATTTATGAATTGTGCATGCCATTACACATGCCAATCGATATGGTGAAATTGTTATAAATAAAGAATAAATACAATTGTTTTAACTGATGCAAAGAGTTTCAAATGAATGGAAGAGTTTCGTTTTGAGGAATATTTGAGTTGGAAATTAATGAATTGTGGAGTGGTTGAGGAAGAAGAAAAGAAAAGGATGGTGTTTTTTTGTCGTTTTGGATTGGTTCAGAGTCTGAAGTTATTGGAAGATG

mRNA sequence

CATCTTCTCCATTCCCTTTCTCTCTCATCATCACAAAACCAAAAAATCAAAAGTAGAGAAAGTCCGATCAATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTTGATGATTTTGATTCGATTTAGGGATTTTTCTTTTCTTTTTGTGTAATTTATGAATTGTGCATGCCATTACACATGCCAATCGATATGGTGAAATTGTTATAAATAAAGAATAAATACAATTGTTTTAACTGATGCAAAGAGTTTCAAATGAATGGAAGAGTTTCGTTTTGAGGAATATTTGAGTTGGAAATTAATGAATTGTGGAGTGGTTGAGGAAGAAGAAAAGAAAAGGATGGTGTTTTTTTGTCGTTTTGGATTGGTTCAGAGTCTGAAGTTATTGGAAGATG

Coding sequence (CDS)

ATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTTGA

Protein sequence

MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHGGHSTELVTAYGMKTMATDGSFDAENVFHSADF

Homology

[Close]

BLAST of MELO3C009681.2 vs. NCBI nr
Match: XP_008443147.1 (PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
          GHSTELVTAYGMKTMATDGSFDAENVFHSADF
Sbjct: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92

[Close]

BLAST of MELO3C009681.2 vs. NCBI nr
Match: KGN59359.1 (hypothetical protein Csa_3G813040 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25
Identity = 78/93 (83.87%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1   MGKFVELLDVGVRMAARFHSHCPQTARLY-YHPPSDHXXXXXXXXXXXXQIFQAYDGGRH 60
           MGKFVELLDVGVRMAARFHSHCPQTARLY        XXXXXXXXXXX QIFQAYD    
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYXXXXXXXXXXXXXXXXXXXHQIFQAYD---- 94

Query: 61  GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
           GGHSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 95  GGHSTELVTAYGMKTVAMDGSFDAENVFHSADF 123

[Close]

BLAST of MELO3C009681.2 vs. NCBI nr
Match: XP_011652134.1 (PREDICTED: uncharacterized protein LOC105434988 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25
Identity = 78/93 (83.87%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLY-YHPPSDHXXXXXXXXXXXXQIFQAYDGGRH 60
          MGKFVELLDVGVRMAARFHSHCPQTARLY        XXXXXXXXXXX QIFQAYD    
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYXXXXXXXXXXXXXXXXXXXHQIFQAYD---- 60

Query: 61 GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
          GGHSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 61 GGHSTELVTAYGMKTVAMDGSFDAENVFHSADF 89

[Close]

BLAST of MELO3C009681.2 vs. NCBI nr
Match: XP_022154266.1 (uncharacterized protein LOC111021559 [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18
Identity = 58/95 (61.05%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDH            QI  AYDG   G
Sbjct: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDH----DDQHHYLHQILHAYDG---G 60

Query: 61 GHST-ELVTAYGMKT--MATDGSFDAENVFHSADF 93
          GHST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 GHSTAHQVSGCGIETAARARARSFDTEIVFHTADF 88

[Close]

BLAST of MELO3C009681.2 vs. NCBI nr
Match: OWM67245.1 (hypothetical protein CDL15_Pgr000697 [Punica granatum] >PKI32325.1 hypothetical protein CRG98_047272 [Punica granatum])

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSD 36
          MGK+VELLDVGVR+AARFHSHCPQTARLYYHPPS+
Sbjct: 1  MGKYVELLDVGVRLAARFHSHCPQTARLYYHPPSN 35

[Close]

BLAST of MELO3C009681.2 vs. TAIR10
Match: AT3G57450.1 (unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 5.4e-09
Identity = 24/28 (85.71%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARL 29
          MGK+ E+LDVGVR+AARFHSHCPQTARL
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARL 28

[Close]

BLAST of MELO3C009681.2 vs. TrEMBL
Match: tr|A0A1S3B7E5|A0A1S3B7E5_CUCME (uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.0e-39
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHXXXXXXXXXXXXQIFQAYDGGRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
          GHSTELVTAYGMKTMATDGSFDAENVFHSADF
Sbjct: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92

[Close]

BLAST of MELO3C009681.2 vs. TrEMBL
Match: tr|A0A0A0LEL3|A0A0A0LEL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-25
Identity = 78/93 (83.87%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1   MGKFVELLDVGVRMAARFHSHCPQTARLY-YHPPSDHXXXXXXXXXXXXQIFQAYDGGRH 60
           MGKFVELLDVGVRMAARFHSHCPQTARLY        XXXXXXXXXXX QIFQAYD    
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYXXXXXXXXXXXXXXXXXXXHQIFQAYD---- 94

Query: 61  GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
           GGHSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 95  GGHSTELVTAYGMKTVAMDGSFDAENVFHSADF 123

[Close]

BLAST of MELO3C009681.2 vs. TrEMBL
Match: tr|A0A218W392|A0A218W392_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000697 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-11
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSD 36
          MGK+VELLDVGVR+AARFHSHCPQTARLYYHPPS+
Sbjct: 1  MGKYVELLDVGVRLAARFHSHCPQTARLYYHPPSN 35

[Close]

BLAST of MELO3C009681.2 vs. TrEMBL
Match: tr|A0A200QAK0|A0A200QAK0_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8715g1 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.2e-11
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDH 37
          MGK++E+LD+GVR+ ARFHSHCPQTAR+YYHPPSDH
Sbjct: 1  MGKYIEILDLGVRIVARFHSHCPQTARMYYHPPSDH 36

[Close]

BLAST of MELO3C009681.2 vs. TrEMBL
Match: tr|A0A2J6KK84|A0A2J6KK84_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_9X28941 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSD 36
          MGK+VE+LD+GVRMAARFHSHCPQTARLYYHPPS+
Sbjct: 1  MGKYVEILDLGVRMAARFHSHCPQTARLYYHPPSN 35

The following BLAST results are available for this feature:

BLAST of MELO3C009681.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443147.1	1.2e-38	100.00	PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo]	[more]
KGN59359.1	2.6e-25	83.87	hypothetical protein Csa_3G813040 [Cucumis sativus]	[more]
XP_011652134.1	2.6e-25	83.87	PREDICTED: uncharacterized protein LOC105434988 [Cucumis sativus]	[more]
XP_022154266.1	2.4e-18	61.05	uncharacterized protein LOC111021559 [Momordica charantia]	[more]
OWM67245.1	1.1e-10	91.43	hypothetical protein CDL15_Pgr000697 [Punica granatum] >PKI32325.1 hypothetical ...	[more]

BLAST of MELO3C009681.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57450.1	5.4e-09	85.71	unknown protein	[more]

BLAST of MELO3C009681.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C009681.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7E5\|A0A1S3B7E5_CUCME	8.0e-39	100.00	uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=...	[more]
tr\|A0A0A0LEL3\|A0A0A0LEL3_CUCSA	1.7e-25	83.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1	[more]
tr\|A0A218W392\|A0A218W392_PUNGR	7.0e-11	91.43	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000697 PE=4 SV=1	[more]
tr\|A0A200QAK0\|A0A200QAK0_9MAGN	9.2e-11	80.56	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8715g1 PE=4 SV=1	[more]
tr\|A0A2J6KK84\|A0A2J6KK84_LACSA	1.2e-10	88.57	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_9X28941 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009681.2.1	MELO3C009681.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33983	FAMILY NOT NAMED	coord: 1..49

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C009681.2	CmaCh17G009670	Cucurbita maxima (Rimu)	cmamedB389
MELO3C009681.2	CmaCh14G004590	Cucurbita maxima (Rimu)	cmamedB260
MELO3C009681.2	CmoCh14G004660	Cucurbita moschata (Rifu)	cmomedB244
MELO3C009681.2	Lsi03G016860	Bottle gourd (USVL1VR-Ls)	lsimedB273
MELO3C009681.2	CsGy3G034490	Cucumber (Gy14) v2	cgybmedB185
MELO3C009681.2	CsGy7G017440	Cucumber (Gy14) v2	cgybmedB486
MELO3C009681.2	Cla017492	Watermelon (97103) v1	medwmB344
MELO3C009681.2	ClCG10G017020	Watermelon (Charleston Gray)	medwcgB309
MELO3C009681.2	Cla97C10G199870	Watermelon (97103) v2	medwmbB305
MELO3C009681.2	Carg01256	Silver-seed gourd	carmedB0164
MELO3C009681.2	Carg03531	Silver-seed gourd	carmedB0261
MELO3C009681.2	CsaV3_3G039380	Cucumber (Chinese Long) v3	cucmedB211

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C009681.2	Cucurbita pepo (Zucchini)	cpemedB678
MELO3C009681.2	Cucumber (Gy14) v1	cgymedB559
MELO3C009681.2	Cucurbita maxima (Rimu)	cmamedB852
MELO3C009681.2	Cucurbita moschata (Rifu)	cmomedB846
MELO3C009681.2	Cucurbita pepo (Zucchini)	cpemedB938
MELO3C009681.2	Wild cucumber (PI 183967)	cpimedB208
MELO3C009681.2	Cucumber (Chinese Long) v2	cumedB207
MELO3C009681.2	Wax gourd	medwgoB384