MELO3C009550 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009550
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA-binding family protein
Location	chr4 : 30084419 .. 30086731 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCAAAGCAACCTTATCCAATATCACTTGATCGGATTTTTCCATGTGACGTGGAATTCCCAAGTGATATGTTACATTTTCATCTTCCAAATTCTGAAGCTGCCCAGTTCCCCAAGGCTTCCCGGAGCAGAAAAATCCATCCCTATCGCTTGGGAATTCCGCCATTCCCATTATCTTCCTCAAATGTCGGCTTATTCTCTGGCTGCTGCTGCTGCTGCAGCTTCAGCTTCTTCATCTCCACTCTACAAGAAACACTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTTTCTCCAAAACACAACAAATTGAAGCTTCTCAACCTCACAATCCATTTACCCAATTTTTACCCTCTTTCCTTCTCCTCTGTTTCTCATATCCACTGTGCGCCTCCGGCTTTCGATGAGCTTGAAATCTCCGACCCAGAAACAGAATACGGAGACGTACAAGAATCGGATGGTGAAGAACAAACCCAAGAAGAAGATGAACAAAAAATATCGGTATCTCGTGAAGCAGGGAAGCTTTACATTGGAAATTTACCCTATGCTATGACTTCTTCCCAATTGTCTGAGGTATTTGCCGAAGCCGGTCAAGTGGTTTCTGTGCAGGTTTGTGATTGAGCTTGTTTTTTTAGGGCTAATTAGAACTGCTTGACCATTGTGGGTTCTCATGTGATTTATCTTCTGCATCTTATGTTAGGTTATATACGATAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTGTAACTTACTTATATTCTCTCTTTTTTCTTTCATTTTCTTTTAGCTTAACAATTGTGGAGATTTTTTGCATACTTTCTAACTTGTGAGTTTGAAAGCAGTGGTTAGAAACTAGGGTTGGATATAATAGTTTGTTTTAGCTGTTAGCTTAACTTACTAGCGGTTGTTACTTTCATATGCGTTGATAGAAGGGCAGAGTTTTTTGGCAGTTCTTTAAGAGTAATTTATTTAGAAAGGTAGAGAAGTTGTGTGAAGGTTTTTGTAGAATTAGGTGATATTAGTGTTAGTGATACACATTAGAGGGTGCTGATGATTCTAACAGAATGGAGCATACAAATAGATTCTAAATGCTTAAGTGTAATAGTTTTGGTACCACGGTACAATGTCTATATATGATAGACAAATTTATTGACAGTGTGTAAGATATTCAAGATTGCTATGATGTTACTAATGGTTGCACTACTTGTCAGCAAATCGGCGGTCGAACCGTTCGGGTGAATTTCCCTGAAGTGCCAAGGGGAGGTGAAAAGGAAGTAATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGCCCACACAAAATATATGCAGGGAACCTTGGTTGGGGCCTCACTTCTCAGAGTCTAAGAGACGCTTTTGAAAACCAACCGGGGATATTGAGTGCTAAGGTCATCTATGATAGGGCATCCGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTCTGCTTTGGAGTCCATGAATGGAGTGGTAAGGAAGTGGAGTTACTTTCTAAAAGATTGCGAATCTAGAATTAATTATTTAAATAGAGTAGTTGGCAATTTGATTCTAGAGATTAGAAAACTTGAACCTGTGACAGAATTTACTGATGTGATTGATCCCTAACTACATTATTACTTTTCAACTACTTCAAAATGGGCCCATATTAACATAAACCTTGCAAACCAGAATTACATTATTTGAGAAATAGCCATGAAAAAATGTACCTGCATTTTGTATGTTTAGCCCTGTGTTATAGATACAAGTCACACATTAACCTCCTCCTATGCACATGCCTACAGGAAGTTGAAGGGCGGCCGCTGCGTTTGAATATTGCTGCAGAACGGGCCCCAACTTCTCCAGCAGCATTCCCAAGGACTGAGAATACCATTGACAGCAAAGAATTGCTTACAAGTATCAGTGCCTGAAATCTGATGTTGTGAGTTGGCTTGAAAATTAAACTGAAACTGAAGGTTAAGGAAACTTTTTCTGCAAATTGCATACCTTCAGATCTTCCCTCGCAATTCTCTCATTCCTTGCTCAACGACCAAGGAAGACTAGATTTTTTTTCATTGAGTGGTGTATGCGAGTAAAGGGAAAATGTGGAAGTGTTGCCATAGGTTAACGAGTTTTTTATTTATGGCTGGGGAATTGGACTGGATGTACTATGAAATCTCTTTGCTGAGTTAATATTAATATATTCGTCTCTCAGGCCTTTTCTT

mRNA sequence

GATCAAAGCAACCTTATCCAATATCACTTGATCGGATTTTTCCATGTGACGTGGAATTCCCAAGTGATATGTTACATTTTCATCTTCCAAATTCTGAAGCTGCCCAGTTCCCCAAGGCTTCCCGGAGCAGAAAAATCCATCCCTATCGCTTGGGAATTCCGCCATTCCCATTATCTTCCTCAAATGTCGGCTTATTCTCTGGCTGCTGCTGCTGCTGCAGCTTCAGCTTCTTCATCTCCACTCTACAAGAAACACTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTTTCTCCAAAACACAACAAATTGAAGCTTCTCAACCTCACAATCCATTTACCCAATTTTTACCCTCTTTCCTTCTCCTCTGTTTCTCATATCCACTGTGCGCCTCCGGCTTTCGATGAGCTTGAAATCTCCGACCCAGAAACAGAATACGGAGACGTACAAGAATCGGATGGTGAAGAACAAACCCAAGAAGAAGATGAACAAAAAATATCGGTATCTCGTGAAGCAGGGAAGCTTTACATTGGAAATTTACCCTATGCTATGACTTCTTCCCAATTGTCTGAGGTATTTGCCGAAGCCGGTCAAGTGGTTTCTGTGCAGGTTATATACGATAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATCGGCGGTCGAACCGTTCGGGTGAATTTCCCTGAAGTGCCAAGGGGAGGTGAAAAGGAAGTAATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGCCCACACAAAATATATGCAGGGAACCTTGGTTGGGGCCTCACTTCTCAGAGTCTAAGAGACGCTTTTGAAAACCAACCGGGGATATTGAGTGCTAAGGTCATCTATGATAGGGCATCCGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTCTGCTTTGGAGTCCATGAATGGAGTGGTAAGGAAGTGGAGTTACTTTCTAAAAGATTGCGAATCTAGAATTAATTATTTAAATAGAGTAGTTGGCAATTTGATTCTAGAGATTAGAAAACTTGAACCTGTGACAGAATTTACTGATGTGATTGATCCCTAACTACATTATTACTTTTCAACTACTTCAAAATGGGCCCATATTAACATAAACCTTGCAAACCAGAATTACATTATTTGAGAAATAGCCATGAAAAAATGTACCTGCATTTTGTATGTTTAGCCCTGTGTTATAGATACAAGTCACACATTAACCTCCTCCTATGCACATGCCTACAGGAAGTTGAAGGGCGGCCGCTGCGTTTGAATATTGCTGCAGAACGGGCCCCAACTTCTCCAGCAGCATTCCCAAGGACTGAGAATACCATTGACAGCAAAGAATTGCTTACAAGTATCAGTGCCTGAAATCTGATGTTGTGAGTTGGCTTGAAAATTAAACTGAAACTGAAGGTTAAGGAAACTTTTTCTGCAAATTGCATACCTTCAGATCTTCCCTCGCAATTCTCTCATTCCTTGCTCAACGACCAAGGAAGACTAGATTTTTTTTCATTGAGTGGTGTATGCGAGTAAAGGGAAAATGTGGAAGTGTTGCCATAGGTTAACGAGTTTTTTATTTATGGCTGGGGAATTGGACTGGATGTACTATGAAATCTCTTTGCTGAGTTAATATTAATATATTCGTCTCTCAGGCCTTTTCTT

Coding sequence (CDS)

ATGTCGGCTTATTCTCTGGCTGCTGCTGCTGCTGCAGCTTCAGCTTCTTCATCTCCACTCTACAAGAAACACTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTTTCTCCAAAACACAACAAATTGAAGCTTCTCAACCTCACAATCCATTTACCCAATTTTTACCCTCTTTCCTTCTCCTCTGTTTCTCATATCCACTGTGCGCCTCCGGCTTTCGATGAGCTTGAAATCTCCGACCCAGAAACAGAATACGGAGACGTACAAGAATCGGATGGTGAAGAACAAACCCAAGAAGAAGATGAACAAAAAATATCGGTATCTCGTGAAGCAGGGAAGCTTTACATTGGAAATTTACCCTATGCTATGACTTCTTCCCAATTGTCTGAGGTATTTGCCGAAGCCGGTCAAGTGGTTTCTGTGCAGGTTATATACGATAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATCGGCGGTCGAACCGTTCGGGTGAATTTCCCTGAAGTGCCAAGGGGAGGTGAAAAGGAAGTAATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGCCCACACAAAATATATGCAGGGAACCTTGGTTGGGGCCTCACTTCTCAGAGTCTAAGAGACGCTTTTGAAAACCAACCGGGGATATTGAGTGCTAAGGTCATCTATGATAGGGCATCCGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTCTGCTTTGGAGTCCATGAATGGAGTGGTAAGGAAGTGGAGTTACTTTCTAAAAGATTGCGAATCTAGAATTAATTATTTAAATAGAGTAGTTGGCAATTTGATTCTAGAGATTAGAAAACTTGAACCTGTGACAGAATTTACTGATGTGATTGATCCCTAA

Protein sequence

MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSFSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVRKWSYFLKDCESRINYLNRVVGNLILEIRKLEPVTEFTDVIDP*

Homology

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BLAST of MELO3C009550 vs. Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-77
Identity = 156/286 (54.55%), Postives = 200/286 (69.93%), Query Frame = 1


Query: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPK------HNKLKLLNLTIHLP 60
           MS    + AA A+++S+S LY    FTQ P     H S        + K+    L  H P
Sbjct: 1   MSGCCFSFAATASTSSTSLLY---LFTQKPKFSVDHLSLSTYNTHFNFKINSTKLKAHFP 60

Query: 61  NFYPLSFSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGK 120
               L  SS+    CA  + D +E+   + E      ++ EE+ +E++E+  S S E G+
Sbjct: 61  -ISSLYRSSIFLSTCASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGR 120

Query: 121 LYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 180
           LY+GNLP++MTSSQLSE+FAEAG V +V+++YD+VTDRSRGFAFVTM ++EEAKEAIR+F
Sbjct: 121 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 180

Query: 181 DGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRD 240
           DGSQ+GGRTV+VNFPEVPRGGE+EVM  KIRS+Y  FVDSPHK+Y  NL W LTSQ LRD
Sbjct: 181 DGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRD 240

Query: 241 AFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           AF +QPG +SAKVIYDR+SG+SRGFGF++F +AE   SAL++MN V
Sbjct: 241 AFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEV 281

HSP 2 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           KLY+ NL +A+TS  L + FA+    +S +VIYD+ + RSRGF F+T ++ E    A+  
Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277

Query: 174 FDGSQIGGRTVRVN 188
            +  ++ GR +R+N
Sbjct: 278 MNEVELEGRPLRLN 291

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BLAST of MELO3C009550 vs. Swiss-Prot
Match: CP33_ARATH (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.1e-77
Identity = 158/289 (54.67%), Postives = 201/289 (69.55%), Query Frame = 1


Query: 2   SAY--SLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPL 61
           SAY  S  A +AAA+ASS+  +     +   +Q+   F+PK  KL       + PN  PL
Sbjct: 3   SAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKL-----VANCPN--PL 62

Query: 62  SFSSVSHIH---CAPP-----AFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSRE 121
              S    H   CA       A DE++ S  E E  + +  +GEE+ +EE +Q    S E
Sbjct: 63  ILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEE-KQTTQASGE 122

Query: 122 AGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAI 181
            G+LY+GNLPY +TSS+LS++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKEA+
Sbjct: 123 EGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAM 182

Query: 182 RMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQS 241
           +MF+ SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW LTSQ 
Sbjct: 183 QMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQG 242

Query: 242 LRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           L+DAF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ +SAL +MNGV
Sbjct: 243 LKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283

HSP 2 Score: 61.2 bits (147), Expect = 2.4e-08
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F +   V+  +VIY++ T RSRGF F++  + E  + A+  
Sbjct: 220 KVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALAT 279

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 280 MNGVEVEGRALRLN 293

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BLAST of MELO3C009550 vs. Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 97/266 (36.47%), Postives = 142/266 (53.38%), Query Frame = 1


Query: 32  QIPSHFSPKHNKLKLLNLTIHLPNFYPLSFSSVSHIHCAPPAFDELEISDPETEYGDVQE 91
           Q PS   P ++ L   +L     N   LS SS S   C+   F+    +       D  E
Sbjct: 17  QTPSSLKP-NSTLSFFSLPSSSLN---LSLSSSSTGLCSIKPFESSFSTRVALSGFDQLE 76

Query: 92  SDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTD 151
            D E   Q    + +       KL++GNLP+++ S+ L+ +F  AG V  V+VIYDK+T 
Sbjct: 77  DDVEVAEQPRFSEDL-------KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTG 136

Query: 152 RSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP-----------RGGEKEVM 211
           RSRGF FVTM+T EE + A + F+G +I GR +RVN    P           RGG     
Sbjct: 137 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYG 196

Query: 212 GPKIRSSY------NKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASG 271
           G +  +S        + VDS +++Y GNL WG+   +L++ F  Q  ++ AKV+YDR SG
Sbjct: 197 GGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSG 256

Query: 272 KSRGFGFVSFETAEDAESALESMNGV 281
           +SRGFGFV++ ++++   A++S+NGV
Sbjct: 257 RSRGFGFVTYSSSKEVNDAIDSLNGV 271

HSP 2 Score: 69.7 bits (169), Expect = 6.6e-11
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 112 AGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAI 171
           + ++Y+GNL + +    L E+F+E G VV  +V+YD+ + RSRGF FVT ++ +E  +AI
Sbjct: 206 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAI 265

Query: 172 RMFDGSQIGGRTVRVNFPE 191
              +G  + GR++RV+  E
Sbjct: 266 DSLNGVDLDGRSIRVSAAE 284

[Close]

BLAST of MELO3C009550 vs. Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 95/267 (35.58%), Postives = 143/267 (53.56%), Query Frame = 1


Query: 31  NQIPSHFSPKHNKLKLLNLTIHLPNFYPLSFSSVSHIHCAPPAFDELEISDPETEYGDVQ 90
           +Q PS   P ++ L   +L     N   LS SS+ H     P           +++ D  
Sbjct: 16  SQTPSSLKP-NSTLSFFSLPSSSLNL-SLSSSSIGHSASIKPFESSFSTRVALSDF-DQL 75

Query: 91  ESDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVT 150
           E D E   Q    + +       KL++GNLP+++ S+ L+ +F  AG V  V+VIYDK++
Sbjct: 76  EDDVEVAEQPRFSEDL-------KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLS 135

Query: 151 DRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP-----------RGGEKEV 210
            RSRGF FVTM+T EE + A + F+G +I GR +RVN    P           RGG    
Sbjct: 136 GRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSY 195

Query: 211 MGPKIRSSY------NKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRAS 270
            G +  +S        + VDS +++Y GNL WG+   +L++ F  Q  ++ AKV+YDR S
Sbjct: 196 GGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDS 255

Query: 271 GKSRGFGFVSFETAEDAESALESMNGV 281
           G+SRGFGFV++ +A++   A++S+NG+
Sbjct: 256 GRSRGFGFVTYSSAKEVNDAIDSLNGI 272

HSP 2 Score: 70.1 bits (170), Expect = 5.1e-11
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 112 AGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAI 171
           + ++Y+GNL + +    L E+F+E G VV  +V+YD+ + RSRGF FVT ++ +E  +AI
Sbjct: 207 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAI 266

Query: 172 RMFDGSQIGGRTVRVNFPE 191
              +G  + GR++RV+  E
Sbjct: 267 DSLNGIDLDGRSIRVSAAE 285

[Close]

BLAST of MELO3C009550 vs. Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.1e-36
Identity = 99/269 (36.80%), Postives = 145/269 (53.90%), Query Frame = 1


Query: 12  AASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSFSSVSHIHCAP 71
           A+SASS      HF +  P  +P    P      L   ++  P+   LS SS S   C  
Sbjct: 2   ASSASSL-----HFLSLTPQTLPLP-KPTSQTTSLSFFSLP-PSSLNLSLSSSSS--CFS 61

Query: 72  PAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSE 131
             F          +  DV+  DG++  +EE      +     K+++GNLP++  S+ L+E
Sbjct: 62  SRFVRKVTLSDFDQIEDVE--DGDDGVEEERNFSPDL-----KIFVGNLPFSADSAALAE 121

Query: 132 VFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEV 191
           +F  AG V  V+VIYDK+T RSRGF FVTM++ EE + A + F+G ++ GR +RVN    
Sbjct: 122 LFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPP 181

Query: 192 PRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDR 251
           P   E        R   +   DS +++Y GNL WG+   +L   F  Q  ++ AKV+YDR
Sbjct: 182 PEKRENSSFRGGSRGGGS--FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 241

Query: 252 ASGKSRGFGFVSFETAEDAESALESMNGV 281
            SG+SRGFGFV++ +AE+  +A+ES++GV
Sbjct: 242 DSGRSRGFGFVTYSSAEEVNNAIESLDGV 252

HSP 2 Score: 71.6 bits (174), Expect = 1.7e-11
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1


Query: 112 AGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAI 171
           + ++Y+GNL + +    L  +F+E G+VV  +V+YD+ + RSRGF FVT ++ EE   AI
Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246

Query: 172 RMFDGSQIGGRTVRVN 188
              DG  + GR +RV+
Sbjct: 247 ESLDGVDLNGRAIRVS 262

[Close]

BLAST of MELO3C009550 vs. TrEMBL
Match: A0A0A0LBL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782700 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.4e-148
Identity = 266/282 (94.33%), Postives = 274/282 (97.16%), Query Frame = 1


Query: 1   MSAYSL--AAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYP 60
           MSAYSL  AAAAAAA+ SSSPLY KHFFTQHPNQIPSHFSPKHN+LKLLNLT H PNFYP
Sbjct: 1   MSAYSLSMAAAAAAAAVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60

Query: 61  LSFSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIG 120
           LSFSSVSH+HCAPPAFDELEISDPETEYG +QESDGEE+TQEEDEQK+SVSREAGKLYIG
Sbjct: 61  LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240
           IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           QPGILSAK+IYDRASGKSRGFGFVSFETAEDAESALESMNGV
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGV 282

[Close]

BLAST of MELO3C009550 vs. TrEMBL
Match: A0A0A0LBL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782700 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.3e-08
Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F     ++S ++IYD+ + +SRGF FV+  T E+A+ A+  
Sbjct: 219 KIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALES 278

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 279 MNGVEVEGRPLRLN 292

HSP 2 Score: 319.3 bits (817), Expect = 5.4e-84
Identity = 168/284 (59.15%), Postives = 212/284 (74.65%), Query Frame = 1


Query: 6   LAAAAAAASASSS---PLYKKHFFTQHP-NQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 65
           +AA+  + +ASSS    LY     TQ P N +PS F  K  K   L    + P+   LS 
Sbjct: 1   MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQN-PSALHLSL 60

Query: 66  SSVSHIHCAPPAFDELEISD-----PETEYGDVQESDGEEQTQEEDEQKISVSREAGKLY 125
            S+SH      +FD  ++++     PETE    QE + EE  +EE+E K++ S EA +LY
Sbjct: 61  LSLSHFRQFSASFDGFQVTEDSQDEPETE----QEEEEEEAVEEEEEPKVAASDEAARLY 120

Query: 126 IGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDG 185
           +GNLPY+MTSS L+EVFAEAG V S +++YD+VTDRSRGF FVTM ++EEAKEAIR+FDG
Sbjct: 121 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 180

Query: 186 SQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAF 245
           SQIGGRTV+VNFPEVPRGGE+  MGPK+++SY  FVDSPHKIYAGNLGWGLTSQ LRDAF
Sbjct: 181 SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAF 240

Query: 246 ENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           + QPG+LSAKVI++R +G+SRGFGFV+FETAED +SAL++MNGV
Sbjct: 241 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 279

[Close]

BLAST of MELO3C009550 vs. TrEMBL
Match: V4SRF4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012204mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.0e-07
Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F     ++S +VI+++ T RSRGF FVT  T E+ + A+  
Sbjct: 216 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 275

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 276 MNGVEVEGRPLRLN 289

HSP 2 Score: 319.3 bits (817), Expect = 5.4e-84
Identity = 168/286 (58.74%), Postives = 214/286 (74.83%), Query Frame = 1


Query: 6   LAAAAAAASASSS---PLYKKHFFTQHP-NQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 65
           +AA+  + +ASSS    LY     TQ P N +PS F  K  K   L    + P+   LS 
Sbjct: 1   MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQN-PSALHLSL 60

Query: 66  SSVSHIHCAPPAFDELEISD-----PETEYGDVQESDGEEQTQEEDEQKISVSREAGKLY 125
            S+S+      +FD  ++++     PETE    +E + EE  +EE+E K++ S EA +LY
Sbjct: 61  LSLSYFRQFSASFDGFQVTEDSQDEPETEQ---EEEEEEEAVEEEEEPKVAASDEAARLY 120

Query: 126 IGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDG 185
           +GNLPY+MTSS L+EVFAEAG V S +++YD+VTDRSRGF FVTM ++EEAKEAIR+FDG
Sbjct: 121 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 180

Query: 186 SQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAF 245
           SQIGGRTV+VNFPEVPRGGE+  MGPK+++SY  FVDSPHKIYAGNLGWGLTSQ LRDAF
Sbjct: 181 SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAF 240

Query: 246 ENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVR 283
           + QPG+LSAKVI++R +G+SRGFGFV+FETAED +SAL++MNGVVR
Sbjct: 241 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVVR 282

[Close]

BLAST of MELO3C009550 vs. TrEMBL
Match: A0A067KW74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08743 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.7e-83
Identity = 173/283 (61.13%), Postives = 214/283 (75.62%), Query Frame = 1


Query: 9   AAAAASASSSPLYKKHFFTQ----HPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSFSSV 68
           AA+  S+ SS L+ KH  T        Q+   F P    LKLL L I   N  PLS SS 
Sbjct: 2   AASTVSSPSSLLHTKHSITTLLPLPTRQLTKPFKP----LKLLKLYIQFRN--PLSLSSS 61

Query: 69  SHIHCAPPAFDELEISDPET-----EYG-DVQESDGEEQTQ-EEDEQKISVSREAGKLYI 128
           S    +  AFD  E+S  +      EY  +++E + EE+ + EE+E K S S E G+L++
Sbjct: 62  SRFCPSFSAFDSTEVSQDDRQSETEEYEQELKEEEQEEEGEGEEEELKPSESNEEGRLFV 121

Query: 129 GNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGS 188
           GNLPY+MTSSQL+EVF EAGQVV+VQ+IYD+VTDRSRGF FVTMA++E+AKEAIRMF+GS
Sbjct: 122 GNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSRGFGFVTMASVEDAKEAIRMFNGS 181

Query: 189 QIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFE 248
           QIGGRTV+VN PEVP+GGE+EVMGP+IRS+Y  F+DSPHKIYAGNLGWGLTSQ LRDAF 
Sbjct: 182 QIGGRTVKVNIPEVPKGGEREVMGPRIRSTYKGFIDSPHKIYAGNLGWGLTSQGLRDAFA 241

Query: 249 NQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           +QPG LSAKVIY+R +G+SRGFGF+SFE+AE+AE+AL +MNGV
Sbjct: 242 SQPGFLSAKVIYERDTGRSRGFGFISFESAENAEAALNAMNGV 278

[Close]

BLAST of MELO3C009550 vs. TrEMBL
Match: A0A067KW74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08743 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.3e-07
Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + FA     +S +VIY++ T RSRGF F++  + E A+ A+  
Sbjct: 215 KIYAGNLGWGLTSQGLRDAFASQPGFLSAKVIYERDTGRSRGFGFISFESAENAEAALNA 274

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 275 MNGVEVEGRPLRLN 288

HSP 2 Score: 315.8 bits (808), Expect = 5.9e-83
Identity = 166/284 (58.45%), Postives = 212/284 (74.65%), Query Frame = 1


Query: 6   LAAAAAAASASSS---PLYKKHFFTQHP-NQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 65
           +AA+  + +ASSS    LY     TQ P N +PS F  K  K   L    + P+   LS 
Sbjct: 1   MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQN-PSALHLSL 60

Query: 66  SSVSHIHCAPPAFDELEISD-----PETEYGDVQESDGEEQTQEEDEQKISVSREAGKLY 125
            S+S+      +FD  ++++     PETE    +E + EE  +EE+E K++ S EA +LY
Sbjct: 61  LSLSYFRQFSASFDGFQVTEDSQDEPETEQ---EEEEEEEAVEEEEEPKVAASDEAARLY 120

Query: 126 IGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDG 185
           +GNLPY+MTSS L+EVFAEAG V S +++YD+VTDRSRGF FVTM ++EEAKEAIR+FDG
Sbjct: 121 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 180

Query: 186 SQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAF 245
           SQIGGRTV+VNFPEVPRGGE+  MGPK+++SY  FVDSPHKIYAGNLGWGLTSQ LRDAF
Sbjct: 181 SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAF 240

Query: 246 ENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           + QPG+LSAKVI++R +G+SRGFGFV+FETAED +SAL++MNGV
Sbjct: 241 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280

[Close]

BLAST of MELO3C009550 vs. TAIR10
Match: AT3G52380.1 (AT3G52380.1 chloroplast RNA-binding protein 33)

HSP 1 Score: 288.5 bits (737), Expect = 5.1e-78
Identity = 158/289 (54.67%), Postives = 201/289 (69.55%), Query Frame = 1


Query: 2   SAY--SLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPL 61
           SAY  S  A +AAA+ASS+  +     +   +Q+   F+PK  KL       + PN  PL
Sbjct: 3   SAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKL-----VANCPN--PL 62

Query: 62  SFSSVSHIH---CAPP-----AFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSRE 121
              S    H   CA       A DE++ S  E E  + +  +GEE+ +EE +Q    S E
Sbjct: 63  ILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEE-KQTTQASGE 122

Query: 122 AGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAI 181
            G+LY+GNLPY +TSS+LS++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKEA+
Sbjct: 123 EGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAM 182

Query: 182 RMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQS 241
           +MF+ SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW LTSQ 
Sbjct: 183 QMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQG 242

Query: 242 LRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           L+DAF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ +SAL +MNGV
Sbjct: 243 LKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283

HSP 2 Score: 61.2 bits (147), Expect = 1.3e-09
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F +   V+  +VIY++ T RSRGF F++  + E  + A+  
Sbjct: 220 KVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALAT 279

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 280 MNGVEVEGRALRLN 293

[Close]

BLAST of MELO3C009550 vs. TAIR10
Match: AT2G37220.1 (AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 78/201 (38.81%), Postives = 121/201 (60.20%), Query Frame = 1


Query: 91  ESDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVT 150
           E DG        EQ  S      KL++GNLP+ + S+QL+++F  AG V  V+VIYDK+T
Sbjct: 72  EEDGFADVAPPKEQSFSADL---KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKIT 131

Query: 151 DRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVMGPKIRSSYN 210
            RSRGF FVTM+++ E + A + F+G ++ GR +RVN  P  P+  +    GP  RSS+ 
Sbjct: 132 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGP--RSSFG 191

Query: 211 KF-----------VDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRG 270
                          S +++Y GNL WG+   +L   F  Q  ++ A+VIYDR SG+S+G
Sbjct: 192 SSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKG 251

Query: 271 FGFVSFETAEDAESALESMNG 280
           FGFV+++++++ ++A++S++G
Sbjct: 252 FGFVTYDSSQEVQNAIKSLDG 267

HSP 2 Score: 69.7 bits (169), Expect = 3.7e-12
Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           ++Y+GNL + +    L  +F+E G+VV  +VIYD+ + RS+GF FVT  + +E + AI+ 
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264

Query: 174 FDGSQIGGRTVRVNFPE 191
            DG+ + GR +RV+  E
Sbjct: 265 LDGADLDGRQIRVSEAE 281

[Close]

BLAST of MELO3C009550 vs. TAIR10
Match: AT3G52150.1 (AT3G52150.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-31
Identity = 68/182 (37.36%), Postives = 108/182 (59.34%), Query Frame = 1


Query: 97  QTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGF 156
           +T+E+       S  A ++YIGN+P  +T+ QL+++  E G V  VQV+YDK + RSR F
Sbjct: 60  ETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119

Query: 157 AFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPH 216
            F TM ++E+A   +   +G+ + GR ++VN  E P     ++    ++S  + FVDSP+
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDL--SVLQSEDSAFVDSPY 179

Query: 217 KIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALES 276
           K+Y GNL   +T + L + F  +  ++SAKV     + KS GFGFV+F + ED E+A+ +
Sbjct: 180 KVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVA 239

Query: 277 MN 279
           +N
Sbjct: 240 LN 239

HSP 2 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y+GNL   +T   L  +F+E G+VVS +V     T +S GF FVT ++ E+ + AI  
Sbjct: 178 KVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVA 237

Query: 174 FDGSQIGGRTVRVN 188
            + S + G+ +RVN
Sbjct: 238 LNNSLLEGQKIRVN 251

[Close]

BLAST of MELO3C009550 vs. TAIR10
Match: AT4G24770.1 (AT4G24770.1 31-kDa RNA binding protein)

HSP 1 Score: 128.6 bits (322), Expect = 6.8e-30
Identity = 71/204 (34.80%), Postives = 112/204 (54.90%), Query Frame = 1


Query: 76  ELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAE 135
           E + S+ +   GD  E D  E    E  +    S EA KL++GNL Y + S  L+ +F +
Sbjct: 114 EGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEA-KLFVGNLAYDVNSQALAMLFEQ 173

Query: 136 AGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGG 195
           AG V   +VIY++ TD+SRGF FVTM++++EA+ A+  F+   + GR + VN    PRG 
Sbjct: 174 AGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGS 233

Query: 196 EKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGK 255
             E   P++        +   ++Y GNL W + +  L   F     ++ A+V+YDR +G+
Sbjct: 234 RPE-RAPRV-------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGR 293

Query: 256 SRGFGFVSFETAEDAESALESMNG 280
           SRGFGFV+    ++   A+ +++G
Sbjct: 294 SRGFGFVTMSDVDELNEAISALDG 307

HSP 2 Score: 84.3 bits (207), Expect = 1.5e-16
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 1


Query: 103 EQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMA 162
           E+   V   A ++Y+GNLP+ + + +L ++F+E G+VV  +V+YD+ T RSRGF FVTM+
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 163 TLEEAKEAIRMFDGSQIGGRTVRVNFPE--VPRGG 196
            ++E  EAI   DG  + GR +RVN  E   PR G
Sbjct: 294 DVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of MELO3C009550 vs. TAIR10
Match: AT5G50250.1 (AT5G50250.1 chloroplast RNA-binding protein 31B)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 1


Query: 95  EEQTQEEDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSR 154
           +E  + ED        E  KL++GNLPY + S  L+ +F +AG V   +VIY++ TD+SR
Sbjct: 95  DESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSR 154

Query: 155 GFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDS 214
           GF FVTM+T+EEA++A+  F+  ++ GR + VN    PRG   E   P++        D+
Sbjct: 155 GFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVN-RAAPRGSRPE-RQPRV-------YDA 214

Query: 215 PHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESAL 274
             +IY GNL W + S  L   F     ++ A+V+ DR +G+SRGFGFV      +   A+
Sbjct: 215 AFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAI 270

Query: 275 ESMNG 280
            +++G
Sbjct: 275 AALDG 270

HSP 2 Score: 73.6 bits (179), Expect = 2.6e-13
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 1


Query: 103 EQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMA 162
           E++  V   A ++Y+GNLP+ + S +L  +F+E G+VV  +V+ D+ T RSRGF FV M+
Sbjct: 197 ERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMS 256

Query: 163 TLEEAKEAIRMFDGSQIGGRTVRVNFPE 191
              E   AI   DG  + GR ++VN  E
Sbjct: 257 NENEVNVAIAALDGQNLEGRAIKVNVAE 284

[Close]

BLAST of MELO3C009550 vs. NCBI nr
Match: gi|659084515|ref|XP_008442929.1| (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 646.0 bits (1665), Expect = 3.6e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 1


Query: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS 60
           MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS
Sbjct: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS 60

Query: 61  FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL 120
           FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL
Sbjct: 61  FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL 120

Query: 121 PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG 180
           PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG
Sbjct: 121 PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG 180

Query: 181 GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP 240
           GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP
Sbjct: 181 GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP 240

Query: 241 GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVRKWSYFLKDCESRINYLNR 300
           GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVRKWSYFLKDCESRINYLNR
Sbjct: 241 GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVRKWSYFLKDCESRINYLNR 300

Query: 301 VVGNLILEIRKLEPVTEFTDVIDP 325
           VVGNLILEIRKLEPVTEFTDVIDP
Sbjct: 301 VVGNLILEIRKLEPVTEFTDVIDP 324

[Close]

BLAST of MELO3C009550 vs. NCBI nr
Match: gi|659084517|ref|XP_008442930.1| (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-155
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1


Query: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS 60
           MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS
Sbjct: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLS 60

Query: 61  FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL 120
           FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL
Sbjct: 61  FSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNL 120

Query: 121 PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG 180
           PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG
Sbjct: 121 PYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIG 180

Query: 181 GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP 240
           GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP
Sbjct: 181 GRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQP 240

Query: 241 GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV
Sbjct: 241 GILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 280

[Close]

BLAST of MELO3C009550 vs. NCBI nr
Match: gi|659084517|ref|XP_008442930.1| (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 6.9e-08
Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F     ++S +VIYD+ + +SRGF FV+  T E+A+ A+  
Sbjct: 217 KIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALES 276

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 277 MNGVEVEGRPLRLN 290

HSP 2 Score: 533.1 bits (1372), Expect = 3.4e-148
Identity = 266/282 (94.33%), Postives = 274/282 (97.16%), Query Frame = 1


Query: 1   MSAYSL--AAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYP 60
           MSAYSL  AAAAAAA+ SSSPLY KHFFTQHPNQIPSHFSPKHN+LKLLNLT H PNFYP
Sbjct: 1   MSAYSLSMAAAAAAAAVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60

Query: 61  LSFSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIG 120
           LSFSSVSH+HCAPPAFDELEISDPETEYG +QESDGEE+TQEEDEQK+SVSREAGKLYIG
Sbjct: 61  LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240
           IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           QPGILSAK+IYDRASGKSRGFGFVSFETAEDAESALESMNGV
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGV 282

[Close]

BLAST of MELO3C009550 vs. NCBI nr
Match: gi|778684506|ref|XP_004136521.2| (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 9.0e-08
Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L + F     ++S ++IYD+ + +SRGF FV+  T E+A+ A+  
Sbjct: 219 KIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALES 278

Query: 174 FDGSQIGGRTVRVN 188
            +G ++ GR +R+N
Sbjct: 279 MNGVEVEGRPLRLN 292

HSP 2 Score: 320.5 bits (820), Expect = 3.5e-84
Identity = 171/282 (60.64%), Postives = 213/282 (75.53%), Query Frame = 1


Query: 1   MSAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSP-KHNKLKLLNLTIHLPNFYPL 60
           MSA SL+ AAAA   SS  L      T   + +  HF P K N +K L+      ++ P 
Sbjct: 1   MSASSLSVAAAAIGTSSHYLSS----TTINDHLSLHFFPCKANPVKSLSKIRTCLSYSPF 60

Query: 61  SFSSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQ-EEDEQKISVSREAGKLYIG 120
           SF S S I+C   AFD +E++  E E  +++ S  E  T+ EE+E  +S S EAG+LY+G
Sbjct: 61  SFHSRSSIYCVSSAFDSVELNQEEVEE-ELESSIQETVTEAEEEENGVSPSAEAGRLYVG 120

Query: 121 NLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLP++MTSSQLSE+FAEAG+V SV+++YD+VTDRSRGFAFVTM ++EEAKEAIR+FDG+Q
Sbjct: 121 NLPFSMTSSQLSEIFAEAGRVASVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGAQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240
           IGGRT +VNFPEVPRGGE+EVM PKIRSS   FVDSPHKIYAGNL WGLTSQ+LR+AF  
Sbjct: 181 IGGRTAKVNFPEVPRGGEREVMTPKIRSSSQGFVDSPHKIYAGNLSWGLTSQALREAFAE 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 281
           QPG LSAKVIYDR SG+SRGFGF++F +AE+ +SAL +MNGV
Sbjct: 241 QPGFLSAKVIYDRDSGRSRGFGFITFTSAEEVQSALNAMNGV 277

[Close]

BLAST of MELO3C009550 vs. NCBI nr
Match: gi|747092918|ref|XP_011094245.1| (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Sesamum indicum])

HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09
Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1


Query: 114 KLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 173
           K+Y GNL + +TS  L E FAE    +S +VIYD+ + RSRGF F+T  + EE + A+  
Sbjct: 214 KIYAGNLSWGLTSQALREAFAEQPGFLSAKVIYDRDSGRSRGFGFITFTSAEEVQSALNA 273

Query: 174 FDGSQIGGRTVRVNFPE 191
            +G ++ GR +R+N  E
Sbjct: 274 MNGVEVEGRPLRLNLAE 290

HSP 2 Score: 319.3 bits (817), Expect = 7.7e-84
Identity = 168/286 (58.74%), Postives = 214/286 (74.83%), Query Frame = 1


Query: 6   LAAAAAAASASSS---PLYKKHFFTQHP-NQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 65
           +AA+  + +ASSS    LY     TQ P N +PS F  K  K   L    + P+   LS 
Sbjct: 1   MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQN-PSALHLSL 60

Query: 66  SSVSHIHCAPPAFDELEISD-----PETEYGDVQESDGEEQTQEEDEQKISVSREAGKLY 125
            S+S+      +FD  ++++     PETE    +E + EE  +EE+E K++ S EA +LY
Sbjct: 61  LSLSYFRQFSASFDGFQVTEDSQDEPETEQ---EEEEEEEAVEEEEEPKVAASDEAARLY 120

Query: 126 IGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDG 185
           +GNLPY+MTSS L+EVFAEAG V S +++YD+VTDRSRGF FVTM ++EEAKEAIR+FDG
Sbjct: 121 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 180

Query: 186 SQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAF 245
           SQIGGRTV+VNFPEVPRGGE+  MGPK+++SY  FVDSPHKIYAGNLGWGLTSQ LRDAF
Sbjct: 181 SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAF 240

Query: 246 ENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVVR 283
           + QPG+LSAKVI++R +G+SRGFGFV+FETAED +SAL++MNGVVR
Sbjct: 241 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVVR 282

The following BLAST results are available for this feature:

BLAST of MELO3C009550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ROC5_NICSY	1.8e-77	54.55	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1	[more]
CP33_ARATH	9.1e-77	54.67	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=...	[more]
ROC2_NICSY	1.2e-36	36.47	29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1	[more]
ROC2_NICPL	1.2e-36	35.58	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1	[more]
ROC1_NICSY	2.1e-36	36.80	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1	[more]

BLAST of MELO3C009550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBL6_CUCSA	2.4e-148	94.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782700 PE=4 SV=1	[more]
A0A0A0LBL6_CUCSA	6.3e-08	37.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782700 PE=4 SV=1	[more]
V4SRF4_9ROSI	9.0e-07	39.19	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012204mg PE=4 SV=1	[more]
A0A067KW74_JATCU	2.7e-83	61.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08743 PE=4 SV=1	[more]
A0A067KW74_JATCU	5.3e-07	39.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08743 PE=4 SV=1	[more]

BLAST of MELO3C009550 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52380.1	5.1e-78	54.67	chloroplast RNA-binding protein 33	[more]
AT2G37220.1	1.4e-35	38.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52150.1	6.1e-31	37.36	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G24770.1	6.8e-30	34.80	31-kDa RNA binding protein	[more]
AT5G50250.1	1.5e-29	37.30	chloroplast RNA-binding protein 31B	[more]

BLAST of MELO3C009550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084515\|ref\|XP_008442929.1\|	3.6e-182	100.00	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|659084517\|ref\|XP_008442930.1\|	2.2e-155	100.00	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|659084517\|ref\|XP_008442930.1\|	6.9e-08	39.19	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|778684506\|ref\|XP_004136521.2\|	9.0e-08	37.84	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]	[more]
gi\|747092918\|ref\|XP_011094245.1\|	2.8e-09	42.86	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031425	chloroplast RNA processing
biological_process	GO:0008150	biological_process
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003729	mRNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45392	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009550T1	MELO3C009550T1	mRNA
MELO3C009550T2	MELO3C009550T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45392	MU45392	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 218..288 score: 1.2E-19coord: 115..185 score: 1.2
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 114..187 score: 1.1E-27coord: 217..290 score: 6.8
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 113..191 score: 19.57coord: 216..294 score: 19
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 212..296 score: 1.5E-25coord: 87..192 score: 7.5
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 110..189 score: 1.75E-27coord: 211..300 score: 6.58
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 75..199 score: 7.4E-54coord: 215..292 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C009550	Csa3G782700	Cucumber (Chinese Long) v2	cumeB223
MELO3C009550	Cla017613	Watermelon (97103) v1	mewmB346
MELO3C009550	ClCG10G018230	Watermelon (Charleston Gray)	mewcgB315
MELO3C009550	Cla97C10G201200	Watermelon (97103) v2	mewmbB316
MELO3C009550	Bhi11G001974	Wax gourd	mewgoB375
MELO3C009550	CSPI03G35730	Wild cucumber (PI 183967)	cpimeB214
MELO3C009550	Cucsa.241970	Cucumber (Gy14) v1	cgymeB412
MELO3C009550	CmaCh14G003660	Cucurbita maxima (Rimu)	cmameB229
MELO3C009550	Cp4.1LG03g00350	Cucurbita pepo (Zucchini)	cpemeB571
MELO3C009550	CsGy3G033190	Cucumber (Gy14) v2	cgybmeB184
MELO3C009550	Carg03618	Silver-seed gourd	carmeB0251
MELO3C009550	CsaV3_3G038090	Cucumber (Chinese Long) v3	cucmeB218

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C009550	Cucurbita pepo (Zucchini)	cpemeB054
MELO3C009550	Cucurbita pepo (Zucchini)	cpemeB277
MELO3C009550	Cucurbita pepo (Zucchini)	cpemeB445
MELO3C009550	Cucurbita pepo (Zucchini)	cpemeB796
MELO3C009550	Bottle gourd (USVL1VR-Ls)	lsimeB070
MELO3C009550	Bottle gourd (USVL1VR-Ls)	lsimeB140
MELO3C009550	Bottle gourd (USVL1VR-Ls)	lsimeB260
MELO3C009550	Cucumber (Gy14) v2	cgybmeB424
MELO3C009550	Cucumber (Gy14) v2	cgybmeB428
MELO3C009550	Silver-seed gourd	carmeB0241
MELO3C009550	Silver-seed gourd	carmeB0422
MELO3C009550	Silver-seed gourd	carmeB0679
MELO3C009550	Silver-seed gourd	carmeB0803
MELO3C009550	Cucumber (Chinese Long) v3	cucmeB495
MELO3C009550	Cucumber (Chinese Long) v3	cucmeB499
MELO3C009550	Watermelon (97103) v2	mewmbB326
MELO3C009550	Wax gourd	mewgoB419
MELO3C009550	Wax gourd	mewgoB422
MELO3C009550	Melon (DHL92) v3.5.1	memeB135
MELO3C009550	Melon (DHL92) v3.5.1	memeB142
MELO3C009550	Cucumber (Gy14) v1	cgymeB091
MELO3C009550	Cucurbita maxima (Rimu)	cmameB519
MELO3C009550	Cucurbita maxima (Rimu)	cmameB600
MELO3C009550	Cucurbita maxima (Rimu)	cmameB755
MELO3C009550	Cucurbita maxima (Rimu)	cmameB790
MELO3C009550	Cucurbita moschata (Rifu)	cmomeB215
MELO3C009550	Cucurbita moschata (Rifu)	cmomeB590
MELO3C009550	Cucurbita moschata (Rifu)	cmomeB747
MELO3C009550	Cucurbita moschata (Rifu)	cmomeB777
MELO3C009550	Wild cucumber (PI 183967)	cpimeB489
MELO3C009550	Cucumber (Chinese Long) v2	cumeB487
MELO3C009550	Watermelon (Charleston Gray)	mewcgB327
MELO3C009550	Watermelon (97103) v1	mewmB382