MELO3C008930 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008930
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Seed maturation protein
Location	chr8 : 21823222 .. 21824059 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCGTGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCCAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGGTTTTTCCTTTTTTTTTTATTTTTCCCTCCTCTCTCCTAAGTCCACACTATATATTTATATACATATATTCTGTTAGTTAAGTAATAGCAAAATTTATGTATATTATTTTATGAGGTAGATGGTGTTATATATTTTGTTAAACAATTGAGCCTCTTTCATGTCATAAATTGTGTTAATTGATAACAGTAATTTTGGAAAGTTGTAACAAAATTGGCACTACGGACACTAGATCTTTATTAACTAAAAGTTCAAAGATTTTTGGTTTTTTACTTTTTATTTTTATTTTTATTTTGTTATGTTTAATTATTTGAATTGGTTGGTTAGATGGAGAAAGTAACGGCCCGTGACCCGTTGGCAAAAGAAATCGCAGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGTGGGAGCGGCAACCACACATGGAACACACCCAACAACCCACTCAACCGCCACACACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCATCAGATGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCCTGTGACAGAGGGCGTGGTTGGGGTGCACCCGATCGGCACTGCGACTGGCACCGGAAGGACCACAACCGCCCACAACCCTCTTGCTGGTGGTGAGACTGGGTACGGGACCGGCACCCGAACCGGCGGGACAGGGGGAAGTTATACTTAA

mRNA sequence

ATGGAATCCGTGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCCAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGATGGAGAAAGTAACGGCCCGTGACCCGTTGGCAAAAGAAATCGCAGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGTGGGAGCGGCAACCACACATGGAACACACCCAACAACCCACTCAACCGCCACACACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCATCAGATGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCCTGTGACAGAGGGCGTGGTTGGGGTGCACCCGATCGGCACTGCGACTGGCACCGGAAGGACCACAACCGCCCACAACCCTCTTGCTGGTGGTGAGACTGGGTACGGGACCGGCACCCGAACCGGCGGGACAGGGGGAAGTTATACTTAA

Coding sequence (CDS)

ATGGAATCCGTGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCCAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGATGGAGAAAGTAACGGCCCGTGACCCGTTGGCAAAAGAAATCGCAGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGTGGGAGCGGCAACCACACATGGAACACACCCAACAACCCACTCAACCGCCACACACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCATCAGATGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCCTGTGACAGAGGGCGTGGTTGGGGTGCACCCGATCGGCACTGCGACTGGCACCGGAAGGACCACAACCGCCCACAACCCTCTTGCTGGTGGTGAGACTGGGTACGGGACCGGCACCCGAACCGGCGGGACAGGGGGAAGTTATACTTAA

Protein sequence

MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQEARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT*

Homology

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BLAST of MELO3C008930 vs. Swiss-Prot
Match: PM1_SOYBN (18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-51
Identity = 104/163 (63.80%), Postives = 121/163 (74.23%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+A N+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+++AEL+KQ 
Sbjct: 9   ESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMNQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHP--TTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQP 121
           ARQHN A +Q+AT      HG H   T   TAT+STTG +G   G HQ SA+PGHGTGQP
Sbjct: 69  ARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQP 128

Query: 122 TGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
           TG VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 TGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTG 171

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BLAST of MELO3C008930 vs. Swiss-Prot
Match: LEA11_HELAN (11 kDa late embryogenesis abundant protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.4e-22
Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 1


Query: 3   SVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQEA 62
           S KE+AANVAASAKAGM+KTKA++QEK EK+TA DP+ KE+A EKKE + HEAE  KQ A
Sbjct: 10  SAKETAANVAASAKAGMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKHEAEYEKQAA 69

Query: 63  RQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGT 106
           ++HNAA +Q   +G     GTH       +++TT   G+ TGT
Sbjct: 70  KEHNAAQKQTTGIGT----GTH-------SYTTTNVTGHRTGT 101

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BLAST of MELO3C008930 vs. Swiss-Prot
Match: LEA13_GOSHI (Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 53/116 (45.69%), Postives = 65/116 (56.03%), Query Frame = 1


Query: 6   ESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQEARQH 65
           +S  + AASAKAGM+K KA++QEK++++  RDP  KE+A E+KE +  +AEL KQEAR H
Sbjct: 2   QSMKDAAASAKAGMEKAKASMQEKVDQMKTRDPNEKEMARERKEERQEDAELRKQEARHH 61

Query: 66  NAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 122
           NA    A  VG     GT  TT       T G  G  TG H     P  G+G  TG
Sbjct: 62  NAT---AGHVGGGGIGGTGYTTAGYNIGDTGGYGG--TGGHDNRGYPTAGSGYDTG 112

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BLAST of MELO3C008930 vs. Swiss-Prot
Match: LE25_SOLLC (Protein LE25 OS=Solanum lycopersicum GN=LE25 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1


Query: 6  ESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQEARQH 65
          ++  + A++AKAGM+KTKA VQEK E++T RDPL KE+A EKKE ++  AE+ K++A+  
Sbjct: 2  QTGKDAASAAKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVAAAEMGKRDAKAQ 61

Query: 66 NAAVRQ-AATVGAATTHGTHPTTHST 91
          +AA +Q AAT G  TT       H+T
Sbjct: 62 HAAEKQGAATTGTGTTGYGATGNHTT 87

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BLAST of MELO3C008930 vs. Swiss-Prot
Match: JAL34_ARATH (Jacalin-related lectin 34 OS=Arabidopsis thaliana GN=JAL34 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 40/91 (43.96%), Postives = 39/91 (42.86%), Query Frame = 1


Query: 76  GAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTGPVTEGVVGVHPIGT 135
           G  T  GT      T T + TG  G  TGT       G GTG  TG  T    G    GT
Sbjct: 157 GTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGT 216

Query: 136 ATGTGRTTTAHNPLAGGETGYGTGTRTGGTG 167
            TGTG T T      G  TG GTGT TGGTG
Sbjct: 217 GTGTGGTGT------GTGTGTGTGTGTGGTG 241

HSP 2 Score: 42.4 bits (98), Expect = 6.0e-03
Identity = 27/58 (46.55%), Postives = 26/58 (44.83%), Query Frame = 1


Query: 109 SALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTG 167
           S +P  GTG  TG    G       GT TGTG  T        G TG GTGT TGGTG
Sbjct: 126 SPIPTGGTG--TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTG 181

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BLAST of MELO3C008930 vs. TrEMBL
Match: A0A0A0KZ59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499300 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-80
Identity = 155/170 (91.18%), Postives = 158/170 (92.94%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           +ES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ
Sbjct: 8   VESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 67

Query: 61  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT 120
           EARQHNAAVRQAAT  AA THGTHPTTHSTAT+STTGAHGYTTGT Q SALPGHGTGQPT
Sbjct: 68  EARQHNAAVRQAATGAAAATHGTHPTTHSTATYSTTGAHGYTTGTQQTSALPGHGTGQPT 127

Query: 121 GPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT 171
           G VTEGVVG HPIGT TGTGRTTTAHNPLAGG TGYGTGTR   TGGSYT
Sbjct: 128 GLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR---TGGSYT 174

[Close]

BLAST of MELO3C008930 vs. TrEMBL
Match: Q9FNW9_GLYTA (Seed maturation protein LEA 4 OS=Glycine tabacina PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.9e-50
Identity = 106/161 (65.84%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ +AEL+KQ 
Sbjct: 9   ESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 121
           ARQHN A +QAAT G     G    T  TAT+STTG HG   G HQ SA+PGHGTGQPTG
Sbjct: 69  ARQHNTAAKQAATAGHM---GQGHNTPGTATYSTTGEHGQPMGAHQTSAMPGHGTGQPTG 128

Query: 122 PVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
            VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 HVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTG 166

[Close]

BLAST of MELO3C008930 vs. TrEMBL
Match: Q9FNW3_GLYTO (Seed maturation protein LEA 4 OS=Glycine tomentella PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.9e-50
Identity = 107/161 (66.46%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ +AEL+KQ 
Sbjct: 9   ESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 121
           ARQHN A +QAAT G     G    T  TAT+STTG HG   G HQ SALPGHGTGQPTG
Sbjct: 69  ARQHNTAAKQAATAGHM---GQGHHTPGTATYSTTGEHGQPMGAHQTSALPGHGTGQPTG 128

Query: 122 PVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
            VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 HVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTG 166

[Close]

BLAST of MELO3C008930 vs. TrEMBL
Match: Q9FT31_GLYTA (Seed maturation protein OS=Glycine tabacina PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-49
Identity = 106/161 (65.84%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ +AEL+KQ 
Sbjct: 9   ESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 121
           ARQHN A +QAAT G     G    T  TAT+STTG HG   G HQ SA+PGHGTGQPTG
Sbjct: 69  ARQHNTAAKQAATAGHM---GQGHHTPETATYSTTGEHGQPMGAHQTSAMPGHGTGQPTG 128

Query: 122 PVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
            VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 HVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTG 166

[Close]

BLAST of MELO3C008930 vs. TrEMBL
Match: Q541U1_SOYBN (Seed maturation protein LEA 4 OS=Glycine max GN=GLYMA_19G147200 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-49
Identity = 104/163 (63.80%), Postives = 123/163 (75.46%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+A N+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+++AEL+KQ 
Sbjct: 9   ESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMNQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHP--TTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQP 121
           ARQHN A +Q+AT      HG H   T   TAT+STTG +G   G HQ SA+PGHGTGQP
Sbjct: 69  ARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQP 128

Query: 122 TGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
           TG VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 TGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTG 171

[Close]

BLAST of MELO3C008930 vs. TAIR10
Match: AT5G06760.1 (AT5G06760.1 Late Embryogenesis Abundant 4-5)

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-45
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           M+S+KE+A+N+AASAK+GMDKTKAT++EK EK+  RDP+ K++A + KE KI++AE+ K+
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKR 60

Query: 61  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT 120
           E RQHNAA+++AA  GA T  G       TATHSTTG  G+ TGTHQMSALPGHGTGQ T
Sbjct: 61  ETRQHNAAMKEAA--GAGTGLGL-----GTATHSTTGQVGHGTGTHQMSALPGHGTGQLT 120

Query: 121 GPVTEGVVGVHPIGTATGTGRTTTAHNPL--AGGETGYGTG 160
             V EG     PIG  TGTGR TTAHN     GG TGYGTG
Sbjct: 121 DRVVEGTAVTDPIGRNTGTGR-TTAHNTHVGGGGATGYGTG 153

[Close]

BLAST of MELO3C008930 vs. TAIR10
Match: AT3G16460.1 (AT3G16460.1 Mannose-binding lectin superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.8e-09
Identity = 40/91 (43.96%), Postives = 39/91 (42.86%), Query Frame = 1


Query: 76  GAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTGPVTEGVVGVHPIGT 135
           G  T  GT      T T + TG  G  TGT       G GTG  TG  T    G    GT
Sbjct: 157 GTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGT 216

Query: 136 ATGTGRTTTAHNPLAGGETGYGTGTRTGGTG 167
            TGTG T T      G  TG GTGT TGGTG
Sbjct: 217 GTGTGGTGT------GTGTGTGTGTGTGGTG 241

HSP 2 Score: 42.4 bits (98), Expect = 3.4e-04
Identity = 27/58 (46.55%), Postives = 26/58 (44.83%), Query Frame = 1


Query: 109 SALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTG 167
           S +P  GTG  TG    G       GT TGTG  T        G TG GTGT TGGTG
Sbjct: 126 SPIPTGGTG--TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTG 181

[Close]

BLAST of MELO3C008930 vs. TAIR10
Match: AT1G32560.1 (AT1G32560.1 Late embryogenesis abundant protein, group 1 protein)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-07
Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           M+S K+  +++A++AK  M   +A   EK E+  AR    KEIA ++++AK  EA ++  
Sbjct: 1   MQSAKQKISDMASTAKEKMVICQAKADEKAERAMARTKEEKEIAHQRRKAKEAEANMDMH 60

Query: 61  EARQHNAAVRQAATVG--AATTHGTH-PTTHSTATHSTTGAHGY---TTGTHQMSALPGH 120
            A+  +A  +  A       T HG H P        +    HGY    TG   +     H
Sbjct: 61  MAKAAHAEDKLMAKQSHYHVTDHGPHVPQQAPVPAPAPVMGHGYGHNPTGVTSVPPQTYH 120

Query: 121 GTGQPTG 122
            T  PTG
Sbjct: 121 PTYPPTG 127

[Close]

BLAST of MELO3C008930 vs. TAIR10
Match: AT2G35300.1 (AT2G35300.1 Late embryogenesis abundant protein, group 1 protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.1e-06
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           M+S KE  +++A++AK  ++   A  Q   EK  AR    K++A+E++++K  +A+ +  
Sbjct: 1   MQSAKEKISDMASTAKEKLNIGGAKAQGHAEKTMARTKKEKKLAQEREKSKEAQAKADLH 60

Query: 61  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAH 100
           +++  +AA         A  HG H   HST     TGA+
Sbjct: 61  QSKAEHAA--------DAQVHGHHLPGHSTYPTRATGAN 91

[Close]

BLAST of MELO3C008930 vs. NCBI nr
Match: gi|659082984|ref|XP_008442129.1| (PREDICTED: 18 kDa seed maturation protein [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 6.9e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ
Sbjct: 8   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 67

Query: 61  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT 120
           EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT
Sbjct: 68  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT 127

Query: 121 GPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT 171
           GPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT
Sbjct: 128 GPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT 177

[Close]

BLAST of MELO3C008930 vs. NCBI nr
Match: gi|449457345|ref|XP_004146409.1| (PREDICTED: 18 kDa seed maturation protein [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-80
Identity = 155/170 (91.18%), Postives = 158/170 (92.94%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           +ES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ
Sbjct: 8   VESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 67

Query: 61  EARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPT 120
           EARQHNAAVRQAAT  AA THGTHPTTHSTAT+STTGAHGYTTGT Q SALPGHGTGQPT
Sbjct: 68  EARQHNAAVRQAATGAAAATHGTHPTTHSTATYSTTGAHGYTTGTQQTSALPGHGTGQPT 127

Query: 121 GPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTRTGGTGGSYT 171
           G VTEGVVG HPIGT TGTGRTTTAHNPLAGG TGYGTGTR   TGGSYT
Sbjct: 128 GLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR---TGGSYT 174

[Close]

BLAST of MELO3C008930 vs. NCBI nr
Match: gi|1009161531|ref|XP_015898949.1| (PREDICTED: 18 kDa seed maturation protein [Ziziphus jujuba])

HSP 1 Score: 206.1 bits (523), Expect = 5.0e-50
Identity = 115/192 (59.90%), Postives = 132/192 (68.75%), Query Frame = 1


Query: 1   MESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQ 60
           MESVKE AANVAASAK+GM+KTKA +QEK E++TA DP+ KE+A EKK  KI EAELNKQ
Sbjct: 8   MESVKEGAANVAASAKSGMEKTKAALQEKKERMTAHDPVEKEMATEKKNEKITEAELNKQ 67

Query: 61  EARQHNAAVRQAATVGAAT---------------------THGTHPTTHSTATHSTTGAH 120
           EAR+ NAA RQAA+ G  T                       G +  T  TAT+STTGA 
Sbjct: 68  EARRQNAAARQAASAGGHTGSTGYTATGTTGYTNSSTGTGNTGNNTITTRTATYSTTGAT 127

Query: 121 GYTTGTHQMSALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTG 171
           G+ TGTHQMSALPGHGTGQP G VT+GV+G HP+GT TGTGR TTAHNP  G     GT 
Sbjct: 128 GHPTGTHQMSALPGHGTGQPAGQVTDGVMGAHPVGTNTGTGR-TTAHNPYTG-----GTN 187

[Close]

BLAST of MELO3C008930 vs. NCBI nr
Match: gi|11612177|gb|AAG37441.1| (seed maturation protein LEA 4 [Glycine tabacina])

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-50
Identity = 106/161 (65.84%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ +AEL+KQ 
Sbjct: 9   ESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 121
           ARQHN A +QAAT G     G    T  TAT+STTG HG   G HQ SA+PGHGTGQPTG
Sbjct: 69  ARQHNTAAKQAATAGHM---GQGHNTPGTATYSTTGEHGQPMGAHQTSAMPGHGTGQPTG 128

Query: 122 PVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
            VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 HVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTG 166

[Close]

BLAST of MELO3C008930 vs. NCBI nr
Match: gi|11612197|gb|AAG37451.1| (seed maturation protein LEA 4 [Glycine tomentella])

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-50
Identity = 107/161 (66.46%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 2   ESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQE 61
           ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ +AEL+KQ 
Sbjct: 9   ESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQA 68

Query: 62  ARQHNAAVRQAATVGAATTHGTHPTTHSTATHSTTGAHGYTTGTHQMSALPGHGTGQPTG 121
           ARQHN A +QAAT G     G    T  TAT+STTG HG   G HQ SALPGHGTGQPTG
Sbjct: 69  ARQHNTAAKQAATAGHM---GQGHHTPGTATYSTTGEHGQPMGAHQTSALPGHGTGQPTG 128

Query: 122 PVTEGVVGVHPIGTATGTGRTTTAHNPLAGG---ETGYGTG 160
            VTEGVVG HPIGT  G G T TAHN  AGG   + GYGTG
Sbjct: 129 HVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTG 166

The following BLAST results are available for this feature:

BLAST of MELO3C008930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PM1_SOYBN	1.2e-51	63.80	18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1	[more]
LEA11_HELAN	3.4e-22	55.34	11 kDa late embryogenesis abundant protein OS=Helianthus annuus PE=2 SV=1	[more]
LEA13_GOSHI	1.6e-16	45.69	Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum PE=2 SV=2	[more]
LE25_SOLLC	2.0e-14	48.84	Protein LE25 OS=Solanum lycopersicum GN=LE25 PE=2 SV=1	[more]
JAL34_ARATH	1.4e-07	43.96	Jacalin-related lectin 34 OS=Arabidopsis thaliana GN=JAL34 PE=1 SV=1	[more]

BLAST of MELO3C008930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ59_CUCSA	3.2e-80	91.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499300 PE=4 SV=1	[more]
Q9FNW9_GLYTA	5.9e-50	65.84	Seed maturation protein LEA 4 OS=Glycine tabacina PE=4 SV=1	[more]
Q9FNW3_GLYTO	5.9e-50	66.46	Seed maturation protein LEA 4 OS=Glycine tomentella PE=4 SV=1	[more]
Q9FT31_GLYTA	1.0e-49	65.84	Seed maturation protein OS=Glycine tabacina PE=2 SV=1	[more]
Q541U1_SOYBN	1.3e-49	63.80	Seed maturation protein LEA 4 OS=Glycine max GN=GLYMA_19G147200 PE=4 SV=1	[more]

BLAST of MELO3C008930 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06760.1	2.3e-45	60.87	Late Embryogenesis Abundant 4-5	[more]
AT3G16460.1	7.8e-09	43.96	Mannose-binding lectin superfamily protein	[more]
AT1G32560.1	7.3e-07	30.71	Late embryogenesis abundant protein, group 1 protein	[more]
AT2G35300.1	6.1e-06	30.30	Late embryogenesis abundant protein, group 1 protein	[more]

BLAST of MELO3C008930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082984\|ref\|XP_008442129.1\|	6.9e-92	100.00	PREDICTED: 18 kDa seed maturation protein [Cucumis melo]	[more]
gi\|449457345\|ref\|XP_004146409.1\|	4.6e-80	91.18	PREDICTED: 18 kDa seed maturation protein [Cucumis sativus]	[more]
gi\|1009161531\|ref\|XP_015898949.1\|	5.0e-50	59.90	PREDICTED: 18 kDa seed maturation protein [Ziziphus jujuba]	[more]
gi\|11612177\|gb\|AAG37441.1\|	8.5e-50	65.84	seed maturation protein LEA 4 [Glycine tabacina]	[more]
gi\|11612197\|gb\|AAG37451.1\|	8.5e-50	66.46	seed maturation protein LEA 4 [Glycine tomentella]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005513	LEA_1

Vocabulary: **Biological Process**
Term	Definition
GO:0009790	embryo development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009790	embryo development
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008930T1	MELO3C008930T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005513	Late embryogenesis abundant protein, LEA-25/LEA-D113	PRODOM	PD005538		coord: 18..66 score: 1.
IPR005513	Late embryogenesis abundant protein, LEA-25/LEA-D113	PFAM	PF03760	LEA_1	coord: 1..70 score: 3.8
None	No IPR available	unknown	Coil	Coil	coord: 40..72 scor
None	No IPR available	PANTHER	PTHR33493	FAMILY NOT NAMED	coord: 1..165 score: 9.3
None	No IPR available	PANTHER	PTHR33493:SF2	LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5	coord: 1..165 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008930	Csa4G499300	Cucumber (Chinese Long) v2	cumeB326
MELO3C008930	Bhi03G002346	Wax gourd	mewgoB656
MELO3C008930	Carg12677	Silver-seed gourd	carmeB0286
MELO3C008930	CsaV3_4G030630	Cucumber (Chinese Long) v3	cucmeB336

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008930	Watermelon (Charleston Gray)	mewcgB526
MELO3C008930	Watermelon (97103) v1	mewmB576
MELO3C008930	Cucurbita pepo (Zucchini)	cpemeB074
MELO3C008930	Cucurbita pepo (Zucchini)	cpemeB450
MELO3C008930	Bottle gourd (USVL1VR-Ls)	lsimeB152
MELO3C008930	Cucumber (Gy14) v2	cgybmeB285
MELO3C008930	Silver-seed gourd	carmeB0287
MELO3C008930	Silver-seed gourd	carmeB0529
MELO3C008930	Watermelon (97103) v2	mewmbB534
MELO3C008930	Cucumber (Gy14) v1	cgymeB573
MELO3C008930	Cucurbita maxima (Rimu)	cmameB620
MELO3C008930	Cucurbita maxima (Rimu)	cmameB811
MELO3C008930	Cucurbita moschata (Rifu)	cmomeB612
MELO3C008930	Cucurbita moschata (Rifu)	cmomeB795
MELO3C008930	Wild cucumber (PI 183967)	cpimeB324