MELO3C008773 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008773
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSuccinate dehydrogenase assembly factor 2, mitochondrial
Locationchr5 : 19028426 .. 19033571 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAAAACCGTTCTCCACTCTTCACTTTCCTCTAGTTCTCTCCAATCTTCAACTTTCGGCTCCTCCCCTCCGATCAGAGGACGCCGGCGACCGCCGCTTACCCTCTCCCATCAGACGACACCGGCGACTGAAACTCCGATCTGACCAGCTGGGCTCTCCCTCCGTTTTGGTTACTTGCTGTCTCGGGTTAGGGGTTTTTCCCTTTTCTTTTCTTTTTTGTGTATCAATGTTTGAGGAAGGTTTCAACTGTTCTGACCGAACATATATATTTCTTTATGCTTTTCTATTCATTACTTCGTATTAATATATAGTCCCAACAGAAATGAGGAAATTTATATGAAACATTGCTTTTCGGGTGCATTTTAAAAAATTATGTATTTTTCTATTTATTTAATGTGGAATTTGTACATATATGGTGTGAGTTTTTTTGGAATATTATCTGGAATTTTTGGTATGGTTTTATCAGATTTGAGACATATGATGCTTTCTTTGGAATGTTTTTGTTTTGAGAACATTTTTTTAATGAATTCATTCTATTTTTTATACTAGATGCCATCTTCCTCCTCGTCTACATCTACCAATAGTAGTCAATCGTCCACGTTTTACATTTGTTTTGGATGAAAATGTGGTCTCTATTTAGGATTTTGTATCTGTATTGTAGGTTGTAACTGTTTGATGGACTCAGACAACTAATGTACTCTTTATTTATGTTTTAAATAAATATTGCTATGTTCTTAGAAATTGAGCGTGTCGTGCCGTGTCATGTCGCGTGTCCGTGTTTCCTAGATCTAGATTAGGGGGAATATCTAGAATGAGGTGCGACACATTGGGATATCTTTTTCGCAAGACCAATGGTTGGATAGTTCTAATTTGGGTTGTGTTCTCTACTCCCAAGTCTCCTTAGAAGTTAGAATTGTAACTAATCCTAATGGTTCAGTACTGGAGCAATGAGGTAATTTGGGTTGTGTTCTCTACTCCCAAGTCTCCTTAGAAGTTAGAATTGTAACTAATCCTAATGGTTAAGTGCTGGAGCAATGAGGTGCAATTATTCTATCTTGGTTTGTCCCTTTTAGACAGTTTTTAAAGGATGAAGAAGCTTTGGATTTTCATATTTTATTGGGTTCTTTAGAAGGATGAAGAATTCTTCACTTGGATTCAAGAAGTTGGAAGTTGGAATCTTTGGGCTTGTTTTTTCAGTTAAATCTCTTACAAATATTTGTTGGCATGTACTCCAATTGATAAAGTTCTTTACATGGAAATCAAAATGGCCTCGTCATGTAAATATCACTATTTGGGTTATGATTTTTGGAGCTCTCAACTACTCTCTTACAATCCAAAGAAAACTTCCTTCTCACTATTTGTTACCTTCAATTTTCGCTCTATGCTTGGCAGATGATGAGAGGTCCCAACATCTCTTCTTTTGATTGTTGCTATTCAAAGGCATGTTGGTCGAAGTTGTTTTCAACGTTCAATCTTCCATTGGTTTTTATTGATTTGTTCAAGGACAGTGTGTTTTTGGCTTTTGGCTTTTGGCTTTGAGTGAGTCCTCCCTTAAAGTTGAAGCCTCTCTCTCAAATTTTATGATCTAAAAAACCAGTTATAGCTATTCTCTCCAAAATTTGATTTGAAAGAAACCAATGCATTTTTCAAGACAAGTCTCTAGCGTGGTCCAACCATTTTGAGTTGCTCAAGTTAAGGCTTCATCTTGGTGTTCTCTCTTCCCGCCTTATGCAGATTATTCCATTCAAGTATATGGTTAAATTGGAATGCATTTATCTTACCAACATAATTTCCTTTGTAAAAATTGACAAATTATTCAAGAGGTTAAAAATGAGGTTTTTTTTTAACACCGAGGGCAGATTGGTAATTATGCCTAATGGCATAATTGAAATTATATCAATCTTTTCTTTTCTGTTAGGTCAACAAGAAAAGAACAAAAAAAGTACAAGAAAAAAAGGAGAGGGGCAGCCGACTTTTGATATACAGAAAGAGAGAGAGAGAGTGACGGCGGAAGTTGACAGGCGCGGCGGAAGAACTTCGACGGCGAGTTTTTTACCGACGACAGGTCAGTCTTCACAGCGATAGCGAGAGGCGGCGTCGGTTTTTTTTTCGGGTATCGTCGAAGGCGTTTTTCGGTGGTCTGCGGCGTCGGGTTATTCGGGGTGTTGTTTCGGCACTTCTTCAGCACCGTTGGTTTTCTCTTCGGGTTTATTCCGACAGATAGCGTCGGGTTGACGGCGTGGGCAAATTCGAGTCTCTTCACCGTCGGGTCTTTCTGGGTTTATTCCGACGAGCAGCGTCGGTCTACAGGCAGTGGTCGACGGTCAGCGTCGTCTTTCCGGGGATCAATACAGCAGGTCTCTCATTCTTGGTTGATGGTATATTTTGAGTTTGCCCTAAATAAAATCCTCCCAAACTGGTTCTCAAAGTGGATGTAGACCAAATTGGTCGAACCACTATATATCGCTGCGTTCTTGTTCTTTTATTGTTCTCTGATTTATTCTGAATTGTGCATTCTGAATTAACATGTTTAGTTTCACAATCTGAATTGGTAAAGAAAATATAATTTGCATCTTCTCTCTAATCCGGAATCCGGATCACATGCTATGGAGCTGTACATTTGCAAGTTCTATGTGGAATTGATTCTTTCTGGAGTTTGGTTTTGTGCAGCACGTTTGAAAGTTATTGGGGATCTGATCGGGAAGTTCCTCCTCCTATCAGTCTTTTAGTGGGAAATGTCGCTTTTTGGGGTTTGTGGGGGGGTGGGTTAGGATACCACCTAATAAGAATACTTGATAAACGAAAACAACACCAAGATGGATACGTAATGTATTGCAATTTCCGTAAAGAAAACACAAACAACATCAAGAGGGTTCTCTCTCCCAAGCTCCATGATAGAAACCCTTACCCCCTCCCTCTGGTGTCCAACTTGTCTTATTTTTGGCCAAGATGCCACTAGCTAATGACCCATGATACTCCTTACTAATACGCTACAAATCTCGCCCATATACCCCTCTAACTAGTACTCTCACAGCTTGCTCTGTTATGGGATCGTTGGGGGAGGGAAATAACTGAGCTTTTAAAGGTGTGGAGAGAGGTCCTAATGATGTGTGGTCTTTGGTGAGGTTTCATGTTTCTTTTTCTGCTCCAATTTCTCTGTAGTTGCTTTATAGACAATATTCGACTTATTTGCAACCCCACTCTGTAGTCTGTAGCGTGTGTATGCTTTTGTATATCTTCGTTTTATTTTTTTAGTAAAAGCAGTTGTTTCTATTTAAAAAAATCATTGTGGAAGTGACTTCAATTATAGGCTATCAAATTGTGGAAGTGTCATATTCTTTCATTTTATTTTAATGAAAGTTGTTTTTTTTATCCCAAAAAGGGCTATCGAATTGTTTGAGTTGTGTTTTTCTATGTTGTTTATCAATATATTGTTGTTTGAATTGTTGTCTTGTGATATTTGATGCTTTGCAAACTATGTTATTTTTCTATGATTCTATGTTTCTCTTGTAAATTAATTAGTCAAACATGCCTATGCTAAGCATAACATTGTTGCGTATAAACACATGAGTCTAGTGGTCTTAGGCATTAGTTTATATTAATGGTATTTATAGAGAGCAATTCCCCTTTAAATATTATTCATTTTTGATAAACTTGTTTCAATACAGTACTATCATTTTGAAATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGGTTCGTTCTTGCTTCATTTTGTTAATTAATTTTCTCATCCCTTTCGCTCTGTGTTTCTCTCAATTATTGACGCATTTGTTTTGATTCACAAGTTGTTTTGTTTGGTTGTTGGACTCAACAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGTAATTTAGTCTTGTACTGCTGACGACTTCTGCGCCTTACTATTTTTTTTCCCCATTTTTGTTATCTTTTTCTTCCTTTTTTATCTTTGTTTATCTCCCTATTGTTATATAAATACGGGTGTATTTCACAATGTCCAAATATGCACAAATATATAATATTTATTTATTTAAAAAAATGTGTCCCCAACATTTTGTGTCGTTTTGAAAATTCAATGTCTATTTCTTAGCTTGCAACTATCCCATAAAAATGAAAAATAGTAGAGATGCAACAAAGACTCGATAATTCTTCTACTCTTGCAGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTGAGCATCCAAGCATGGCATTAATTACTGACCCTTTTATCTTGATTAAATATGTGGTTTACAATTAGAGTATTGTATCGTTGTAGGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAGCTCTTCCCTTTAACTTTATGCCTAATCTCTCTTTTAAGCATATAAGAACAGAAAAGCCCTGCTAAGGTTTCTATACAAATGGTGGATTGTGAATAAGTTAACCCAACAAGTACTTCGAAGGGAACATTGTTTAGTGGTCTTTTCCTTTAAACCCTTGATCTATCGTATATTAATAGTTTTTTTTCCTTGTTACGGTAACAATTTGTTATTTTGATGTGCTTACCAGTATAGATTGTATTTCTTTATAATTTGTGTCTGATTTCTTTAGGGTGTTTGAAGCAACGTGTGTAGTTATTGCGCTTGAAATTTAGTTTCGGAAGTTATTAGATGTGAGTTTGGGATGTGAAGTTGT

mRNA sequence

AAATAAAACCGTTCTCCACTCTTCACTTTCCTCTAGTTCTCTCCAATCTTCAACTTTCGGCTCCTCCCCTCCGATCAGAGGACGCCGGCGACCGCCGCTTACCCTCTCCCATCAGACGACACCGGCGACTGAAACTCCGATCTGACCAGCTGGGCTCTCCCTCCGTTTTGGTTACTTGCTGTCTCGGTACTATCATTTTGAAATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAGCTCTTCCCTTTAACTTTATGCCTAATCTCTCTTTTAAGCATATAAGAACAGAAAAGCCCTGCTAAGGTTTCTATACAAATGGTGGATTGTGAATAAGTTAACCCAACAAGTACTTCGAAGGGAACATTGTTTAGTGGTCTTTTCCTTTAAACCCTTGATCTATCGTATATTAATAGTTTTTTTTCCTTGTTACGGTAACAATTTGTTATTTTGATGTGCTTACCAGTATAGATTGTATTTCTTTATAATTTGTGTCTGATTTCTTTAGGGTGTTTGAAGCAACGTGTGTAGTTATTGCGCTTGAAATTTAGTTTCGGAAGTTATTAGATGTGAGTTTGGGATGTGAAGTTGT

Coding sequence (CDS)

ATGCAAATGGCAACTTTTATAAGGGCTCTAAGCAAAGCTCATCAAGTTCTATACTTGAAAGCCTCCCCCACCATTTTGAGAAGCAAATTGATGCCCTTTTTGCCTAGTGTTTTTATTGGGTTGGAGAATCTACAAAGCCAACTAACAAATCGAAATCAGAATCACCATGGTTGTTCCTTTAGTCTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCGAATGAGGATAGCAAGAGGCAATTATTCAATAGATTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGGGATCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACTGGCCAAGAGCAGCCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAG

Protein sequence

MQMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRGWDDFKKGRDGPITGNQ*
Homology
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BLAST of MELO3C008773 vs. Swiss-Prot
Match: SDAF2_ARATH (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana GN=SDHAF2 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.5e-56
Identity = 105/193 (54.40%), Postives = 139/193 (72.02%), Query Frame = 1 

Query: 8   RALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSLHFSST 67
           +AL   H+++  +++  + RS ++P          N    +  RN    G  F    +++
Sbjct: 5   KALINVHRII--RSTAVVGRSSIIP-------AAANRSYPIIFRNGVDLGARFFCENTAS 64

Query: 68  STNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVL 127
           + N DIDLSNE++KR+  NRLLYRSKQRGFLELDL+LG WVE++++S+D +G++ LI+VL
Sbjct: 65  AQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVL 124

Query: 128 DLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRGWDD 187
           +LENPDLWKWLT QEQPPEA+ +NPVF+ + EKVM NLNKHA+PETR   GQ WVRGWDD
Sbjct: 125 NLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDD 184

Query: 188 FKKGRDGPITGNQ 201
           FK+GRD PI+GNQ
Sbjct: 185 FKRGRDAPISGNQ 188

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BLAST of MELO3C008773 vs. Swiss-Prot
Match: SDHF2_DICDI (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0293946 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 30/79 (37.97%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 73  IDLSNEDSK-RQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLEN 132
           I ++NE S+  +L  +LLY+SK+RG LE DL+LG +   +IH L    +RD   +L   +
Sbjct: 43  IKINNEISEIEKLRKKLLYQSKERGMLENDLLLGSFATLNIHKLTESQLRDYNLLLQQPD 102

Query: 133 PDLWKWLTGQEQPPEALKT 151
           PD++ W+  + + PE  +T
Sbjct: 103 PDIFNWILKKAEVPEEFET 121

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BLAST of MELO3C008773 vs. Swiss-Prot
Match: SDHF2_SCHJY (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_01895 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 25/83 (30.12%), Postives = 51/83 (61.45%), Query Frame = 1 

Query: 77  NEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLENPDLWK 136
           ++++++ L +RL+Y+S++RG LE DLIL  + ++++   + + +++  N+L+  + D+  
Sbjct: 46  SKETEKLLRSRLVYQSRKRGILETDLILSGFAKEYLSKYNVELLKEYDNLLNEADWDILY 105

Query: 137 WLTGQEQPPEALKTNPVFTGVKE 160
           W TG+ Q PE    + V   +KE
Sbjct: 106 WCTGERQAPEHWLNSRVLRDLKE 128

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BLAST of MELO3C008773 vs. Swiss-Prot
Match: SDHF2_CRYNJ (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNA04680 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 73  IDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLENP 132
           +D + ED K  L  RL+Y++++RG LE DLIL  +  D + ++D + ++    +LD  + 
Sbjct: 68  LDRTGEDEKT-LRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDW 127

Query: 133 DLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPE 173
           D++ W   +  PP   K  P        ++  L KHA  E
Sbjct: 128 DIFYWSVKKRDPPARWKGTP--------LLEKLQKHAKNE 158

[Close]
BLAST of MELO3C008773 vs. Swiss-Prot
Match: SDHF2_CRYNB (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBA4490 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 73  IDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVLDLENP 132
           +D + ED K  L  RL+Y++++RG LE DLIL  +  D + ++D + ++    +LD  + 
Sbjct: 68  LDRTGEDEKT-LRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDW 127

Query: 133 DLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPE 173
           D++ W   +  PP   K  P        ++  L KHA  E
Sbjct: 128 DIFYWSVKKRDPPARWKGTP--------LLEKLQKHAKNE 158

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BLAST of MELO3C008773 vs. TrEMBL
Match: A0A0A0LKF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G072460 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-104
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 1 

Query: 2   QMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFS 61
           QMATFIRAL+KAHQVLYLKASPTILRSK MP LP+ FIGL+NLQ +LTNRNQNHHGC  S
Sbjct: 67  QMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGCFSS 126

Query: 62  LHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR 121
           +HFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR
Sbjct: 127 VHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR 186

Query: 122 DLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQW 181
            LINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKV++NLNKHASPETRTPPGQQW
Sbjct: 187 ALINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVIDNLNKHASPETRTPPGQQW 246

Query: 182 VRGWDDFKKGRDGPITGNQ 201
           VRGWDDFKKGRDGPITGNQ
Sbjct: 247 VRGWDDFKKGRDGPITGNQ 265

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BLAST of MELO3C008773 vs. TrEMBL
Match: F6HWL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0283g00060 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.0e-58
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 1 

Query: 58  CSFSLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDA 117
           C FS   S +  +P+IDLSNE+SKR+LFNRLLYRSKQRGFLELDL+LGKWVE+HIHS+D 
Sbjct: 48  CGFS---SDSIHSPEIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDH 107

Query: 118 DGIRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPP 177
           +GI+ L++VLDLENPDLWKWLTGQEQPPEA+  NPVF  V+EKVMNNLN H++PETR  P
Sbjct: 108 NGIKSLVHVLDLENPDLWKWLTGQEQPPEAVSINPVFCAVREKVMNNLNSHSAPETRAMP 167

Query: 178 GQQWVRGWDDFKKGRDGPITGNQ 201
           G+ WVRGWDD KKGRD P++GNQ
Sbjct: 168 GKPWVRGWDDIKKGRDSPVSGNQ 187

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BLAST of MELO3C008773 vs. TrEMBL
Match: V4TAF7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032866mg PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-57
Identity = 103/136 (75.74%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 65  SSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLI 124
           S+T+ + DIDLSNE+ K++LFNRLLYRSKQRGFLELDL+LGKWVE+HIHS+D +GI+ L+
Sbjct: 47  SNTTQSLDIDLSNEEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDKNGIKALV 106

Query: 125 NVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRG 184
           +VL+LENPDLWKWLTGQEQPPEA+KTNPVF+ +  KVMNNLN +ASPETR+ PGQ WVRG
Sbjct: 107 DVLNLENPDLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYASPETRSEPGQPWVRG 166

Query: 185 WDDFKKGRDGPITGNQ 201
           WDDFKKGRD P++GNQ
Sbjct: 167 WDDFKKGRDSPLSGNQ 182

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BLAST of MELO3C008773 vs. TrEMBL
Match: M5WAU4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012247mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-57
Identity = 106/150 (70.67%), Postives = 126/150 (84.00%), Query Frame = 1 

Query: 51  RNQNHHGCSFSLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVED 110
           R Q  +G     +   T++N DIDLSN++SKR+LFNRL+YRSKQRGFLELDL+LGKWVE+
Sbjct: 29  RPQYGYGLVQRSYSIGTTSNLDIDLSNQESKRRLFNRLIYRSKQRGFLELDLVLGKWVEE 88

Query: 111 HIHSLDADGIRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHAS 170
           HIHS+D +GI+ L++VLDLENP LWKWL GQEQPPEALKTNPVFT V+ KV+NNLN +A+
Sbjct: 89  HIHSMDENGIKSLVDVLDLENPYLWKWLIGQEQPPEALKTNPVFTAVRNKVLNNLNSYAA 148

Query: 171 PETRTPPGQQWVRGWDDFKKGRDGPITGNQ 201
           PETR  PGQ WVRGWDD KKG+ GPITGNQ
Sbjct: 149 PETRATPGQPWVRGWDDIKKGQGGPITGNQ 178

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BLAST of MELO3C008773 vs. TrEMBL
Match: A0A067F365_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039261mg PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-57
Identity = 102/136 (75.00%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 65  SSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLI 124
           S+T+ + DIDLSN++ K++LFNRLLYRSKQRGFLELDL+LGKWVE+HIHS+D +GI+ L+
Sbjct: 47  SNTTQSLDIDLSNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALV 106

Query: 125 NVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRG 184
           +VL+LENPDLWKWLTGQEQPPEA+KTNPVF+ +  KVMNNLN +ASPETR+ PGQ WVRG
Sbjct: 107 DVLNLENPDLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYASPETRSEPGQPWVRG 166

Query: 185 WDDFKKGRDGPITGNQ 201
           WDDFKKGRD P++GNQ
Sbjct: 167 WDDFKKGRDSPLSGNQ 182

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BLAST of MELO3C008773 vs. TAIR10
Match: AT5G51040.3 (AT5G51040.3 unknown protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.4e-55
Identity = 105/202 (51.98%), Postives = 139/202 (68.81%), Query Frame = 1 

Query: 8   RALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSLHFSST 67
           +AL   H+++  +++  + RS ++P          N    +  RN    G  F    +++
Sbjct: 5   KALINVHRII--RSTAVVGRSSIIP-------AAANRSYPIIFRNGVDLGARFFCENTAS 64

Query: 68  STNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLINVL 127
           + N DIDLSNE++KR+  NRLLYRSKQRGFLELDL+LG WVE++++S+D +G++ LI+VL
Sbjct: 65  AQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVL 124

Query: 128 DL---------ENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPG 187
           +L         ENPDLWKWLT QEQPPEA+ +NPVF+ + EKVM NLNKHA+PETR   G
Sbjct: 125 NLVESEATKLLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAG 184

Query: 188 QQWVRGWDDFKKGRDGPITGNQ 201
           Q WVRGWDDFK+GRD PI+GNQ
Sbjct: 185 QPWVRGWDDFKRGRDAPISGNQ 197

[Close]
BLAST of MELO3C008773 vs. NCBI nr
Match: gi|659082578|ref|XP_008441916.1| (PREDICTED: uncharacterized protein LOC103485912 [Cucumis melo])

HSP 1 Score: 415.2 bits (1066), Expect = 6.4e-113
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MQMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSF 60
           MQMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSF
Sbjct: 1   MQMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSF 60

Query: 61  SLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGI 120
           SLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGI
Sbjct: 61  SLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGI 120

Query: 121 RDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQ 180
           RDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQ
Sbjct: 121 RDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQ 180

Query: 181 WVRGWDDFKKGRDGPITGNQ 201
           WVRGWDDFKKGRDGPITGNQ
Sbjct: 181 WVRGWDDFKKGRDGPITGNQ 200

[Close]
BLAST of MELO3C008773 vs. NCBI nr
Match: gi|700206113|gb|KGN61232.1| (hypothetical protein Csa_2G072460 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 1.9e-104
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 1 

Query: 2   QMATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFS 61
           QMATFIRAL+KAHQVLYLKASPTILRSK MP LP+ FIGL+NLQ +LTNRNQNHHGC  S
Sbjct: 67  QMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGCFSS 126

Query: 62  LHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR 121
           +HFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR
Sbjct: 127 VHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR 186

Query: 122 DLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQW 181
            LINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKV++NLNKHASPETRTPPGQQW
Sbjct: 187 ALINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVIDNLNKHASPETRTPPGQQW 246

Query: 182 VRGWDDFKKGRDGPITGNQ 201
           VRGWDDFKKGRDGPITGNQ
Sbjct: 247 VRGWDDFKKGRDGPITGNQ 265

[Close]
BLAST of MELO3C008773 vs. NCBI nr
Match: gi|449470271|ref|XP_004152841.1| (PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 7.1e-104
Identity = 184/198 (92.93%), Postives = 191/198 (96.46%), Query Frame = 1 

Query: 3   MATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSL 62
           MATFIRAL+KAHQVLYLKASPTILRSK MP LP+ FIGL+NLQ +LTNRNQNHHGC  S+
Sbjct: 1   MATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGCFSSV 60

Query: 63  HFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRD 122
           HFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIR 
Sbjct: 61  HFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRA 120

Query: 123 LINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWV 182
           LINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKV++NLNKHASPETRTPPGQQWV
Sbjct: 121 LINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVIDNLNKHASPETRTPPGQQWV 180

Query: 183 RGWDDFKKGRDGPITGNQ 201
           RGWDDFKKGRDGPITGNQ
Sbjct: 181 RGWDDFKKGRDGPITGNQ 198

[Close]
BLAST of MELO3C008773 vs. NCBI nr
Match: gi|731439757|ref|XP_010646726.1| (PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Vitis vinifera])

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 1 

Query: 58  CSFSLHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDA 117
           C FS   S +  +P+IDLSNE+SKR+LFNRLLYRSKQRGFLELDL+LGKWVE+HIHS+D 
Sbjct: 48  CGFS---SDSIHSPEIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDH 107

Query: 118 DGIRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPP 177
           +GI+ L++VLDLENPDLWKWLTGQEQPPEA+  NPVF  V+EKVMNNLN H++PETR  P
Sbjct: 108 NGIKSLVHVLDLENPDLWKWLTGQEQPPEAVSINPVFCAVREKVMNNLNSHSAPETRAMP 167

Query: 178 GQQWVRGWDDFKKGRDGPITGNQ 201
           G+ WVRGWDD KKGRD P++GNQ
Sbjct: 168 GKPWVRGWDDIKKGRDSPVSGNQ 187

[Close]
BLAST of MELO3C008773 vs. NCBI nr
Match: gi|567888920|ref|XP_006436982.1| (hypothetical protein CICLE_v10032866mg [Citrus clementina])

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 103/136 (75.74%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 65  SSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRDLI 124
           S+T+ + DIDLSNE+ K++LFNRLLYRSKQRGFLELDL+LGKWVE+HIHS+D +GI+ L+
Sbjct: 47  SNTTQSLDIDLSNEEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDKNGIKALV 106

Query: 125 NVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQQWVRG 184
           +VL+LENPDLWKWLTGQEQPPEA+KTNPVF+ +  KVMNNLN +ASPETR+ PGQ WVRG
Sbjct: 107 DVLNLENPDLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYASPETRSEPGQPWVRG 166

Query: 185 WDDFKKGRDGPITGNQ 201
           WDDFKKGRD P++GNQ
Sbjct: 167 WDDFKKGRDSPLSGNQ 182

The following BLAST results are available for this feature:
BLAST of MELO3C008773 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDAF2_ARATH5.5e-5654.40Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana... [more]
SDHF2_DICDI1.6e-0737.97Succinate dehydrogenase assembly factor 2, mitochondrial OS=Dictyostelium discoi... [more]
SDHF2_SCHJY1.8e-0630.12Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces ... [more]
SDHF2_CRYNJ3.0e-0631.00Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoform... [more]
SDHF2_CRYNB3.0e-0631.00Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoform... [more]
BLAST of MELO3C008773 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKF9_CUCSA1.3e-10492.96Uncharacterized protein OS=Cucumis sativus GN=Csa_2G072460 PE=4 SV=1[more]
F6HWL4_VITVI7.0e-5873.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0283g00060 PE=4 SV=... [more]
V4TAF7_9ROSI1.2e-5775.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032866mg PE=4 SV=1[more]
M5WAU4_PRUPE2.0e-5770.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012247mg PE=4 SV=1[more]
A0A067F365_CITSI2.6e-5775.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039261mg PE=4 SV=1[more]
BLAST of MELO3C008773 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51040.36.4e-5551.98 unknown protein[more]
BLAST of MELO3C008773 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082578|ref|XP_008441916.1|6.4e-113100.00PREDICTED: uncharacterized protein LOC103485912 [Cucumis melo][more]
gi|700206113|gb|KGN61232.1|1.9e-10492.96hypothetical protein Csa_2G072460 [Cucumis sativus][more]
gi|449470271|ref|XP_004152841.1|7.1e-10492.93PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis sat... [more]
gi|731439757|ref|XP_010646726.1|1.0e-5773.43PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Vitis vinif... [more]
gi|567888920|ref|XP_006436982.1|1.7e-5775.74hypothetical protein CICLE_v10032866mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005631SDH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0080022 primary root development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44433melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008773T1MELO3C008773T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44433MU44433transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005631Flavinator of succinate dehydrogenaseGENE3DG3DSA:1.10.150.250coord: 80..166
score: 3.6
IPR005631Flavinator of succinate dehydrogenasePFAMPF03937Sdh5coord: 86..154
score: 6.2
IPR005631Flavinator of succinate dehydrogenaseunknownSSF109910YgfY-likecoord: 86..151
score: 4.18
NoneNo IPR availablePANTHERPTHR12469PROTEIN EMI5 HOMOLOG, MITOCHONDRIALcoord: 71..181
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008773Csa2G072460Cucumber (Chinese Long) v2cumeB133
MELO3C008773CSPI02G06930Wild cucumber (PI 183967)cpimeB139
MELO3C008773Cucsa.178800Cucumber (Gy14) v1cgymeB320
MELO3C008773CsGy2G007150Cucumber (Gy14) v2cgybmeB120
MELO3C008773CsaV3_2G009360Cucumber (Chinese Long) v3cucmeB141
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008773Watermelon (97103) v2mewmbB369
MELO3C008773Wax gourdmewgoB456
MELO3C008773Cucurbita maxima (Rimu)cmameB175
MELO3C008773Cucurbita maxima (Rimu)cmameB737
MELO3C008773Cucurbita moschata (Rifu)cmomeB164
MELO3C008773Cucurbita moschata (Rifu)cmomeB725
MELO3C008773Watermelon (Charleston Gray)mewcgB367
MELO3C008773Watermelon (97103) v1mewmB422
MELO3C008773Cucurbita pepo (Zucchini)cpemeB102
MELO3C008773Cucurbita pepo (Zucchini)cpemeB777
MELO3C008773Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C008773Silver-seed gourdcarmeB0004
MELO3C008773Silver-seed gourdcarmeB0170