MELO3C008178 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AACTAAACCGTGAACTCTGCTCAATTCCATTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCGTTACTGCAAAGCCTATTTTTTTCTCTTCTTTTTTTCTTTCTTTCTAAAGATCCAATCGCTTTACGTTCTTCTACTTTGAGTTTCTCTTTTCTTTTACTCTTTTACGATATCTGTGAAACTATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGATCCGGTAACCTCTTCTTCTTGTCTCTCTTCCCTTTTCTTTCCAGATTCTTACCAACTGAAGCTGCTGATGTCTCTGCTGCCTTGTGTGTTGTACTTCTTTTTGAAGCGGATCTTGTTTGATCTGTCTCTATTTGTTATTTCTGTAGTCGGAGACTTGGAAGACATAAAAGGCATTTTGTACGAATTTTTTTGTTTT AACTAAACCGTGAACTCTGCTCAATTCCATTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCGTTACTGCAAAGCCTATTTTTTTCTCTTCTTTTTTTCTTTCTTTCTAAAGATCCAATCGCTTTACGTTCTTCTACTTTGAGTTTCTCTTTTCTTTTACTCTTTTACGATATCTGTGAAACTATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGATCCGGTAACCTCTTCTTCTTGTCTCTCTTCCCTTTTCTTTCCAGATTCTTACCAACTGAAGCTGCTGATGTCTCTGCTGCCTTGTGTGTTGTACTTCTTTTTGAAGCGGATCTTGTTTGATCTGTCTCTATTTGTTATTTCTGTAGTCGGAGACTTGGAAGACATAAAAGGCATTTTGTACGAATTTTTTTGTTTT ATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGA MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFILALHIHIYTG*
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A0A0LMK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406095 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 2.5e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A164VTJ6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021798 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.8e-27 Identity = 56/69 (81.16%), Postives = 66/69 (95.65%), Query Frame = 1
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A068V855_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019177001 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 9.3e-26 Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A0D2PXJ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272700 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25 Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 1
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A067FKC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035267mg PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25 Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 1
BLAST of MELO3C008178 vs. TAIR10
Match: AT3G27030.1 (AT3G27030.1 unknown protein) HSP 1 Score: 114.8 bits (286), Expect = 2.2e-26 Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 1
HSP 2 Score: 82.8 bits (203), Expect = 9.2e-17 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of MELO3C008178 vs. TAIR10
Match: AT5G40970.1 (AT5G40970.1 Protein of unknown function (DUF 3339)) HSP 1 Score: 104.8 bits (260), Expect = 2.3e-23 Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1
BLAST of MELO3C008178 vs. TAIR10
Match: AT3G48660.1 (AT3G48660.1 Protein of unknown function (DUF 3339)) HSP 1 Score: 94.0 bits (232), Expect = 4.0e-20 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
BLAST of MELO3C008178 vs. TAIR10
Match: AT5G63500.1 (AT5G63500.1 Protein of unknown function (DUF 3339)) HSP 1 Score: 90.5 bits (223), Expect = 4.4e-19 Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 1
BLAST of MELO3C008178 vs. TAIR10
Match: AT5G08391.1 (AT5G08391.1 Protein of unknown function (DUF 3339)) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-18 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 1
BLAST of MELO3C008178 vs. NCBI nr
Match: gi|659081414|ref|XP_008441322.1| (PREDICTED: uncharacterized protein LOC103485472 [Cucumis melo]) HSP 1 Score: 142.1 bits (357), Expect = 3.6e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1021033053|gb|KZM90837.1| (hypothetical protein DCAR_021798 [Daucus carota subsp. sativus]) HSP 1 Score: 128.3 bits (321), Expect = 5.4e-27 Identity = 56/69 (81.16%), Postives = 66/69 (95.65%), Query Frame = 1
BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1009151971|ref|XP_015893840.1| (PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 127.5 bits (319), Expect = 9.2e-27 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1009151971|ref|XP_015893840.1| (PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-14 Identity = 34/69 (49.28%), Postives = 54/69 (78.26%), Query Frame = 1
HSP 2 Score: 127.5 bits (319), Expect = 9.2e-27 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of MELO3C008178 vs. NCBI nr
Match: gi|823254744|ref|XP_012460019.1| (PREDICTED: uncharacterized protein LOC105780313 [Gossypium raimondii]) HSP 1 Score: 125.6 bits (314), Expect = 3.5e-26 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|