MELO3C008178 (gene) Melon (DHL92) v3.5.1

NameMELO3C008178
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein of unknown function (DUF 3339)
Locationchr3 : 1579641 .. 1580243 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTAAACCGTGAACTCTGCTCAATTCCATTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCGTTACTGCAAAGCCTATTTTTTTCTCTTCTTTTTTTCTTTCTTTCTAAAGATCCAATCGCTTTACGTTCTTCTACTTTGAGTTTCTCTTTTCTTTTACTCTTTTACGATATCTGTGAAACTATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGATCCGGTAACCTCTTCTTCTTGTCTCTCTTCCCTTTTCTTTCCAGATTCTTACCAACTGAAGCTGCTGATGTCTCTGCTGCCTTGTGTGTTGTACTTCTTTTTGAAGCGGATCTTGTTTGATCTGTCTCTATTTGTTATTTCTGTAGTCGGAGACTTGGAAGACATAAAAGGCATTTTGTACGAATTTTTTTGTTTT

mRNA sequence

AACTAAACCGTGAACTCTGCTCAATTCCATTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCGTTACTGCAAAGCCTATTTTTTTCTCTTCTTTTTTTCTTTCTTTCTAAAGATCCAATCGCTTTACGTTCTTCTACTTTGAGTTTCTCTTTTCTTTTACTCTTTTACGATATCTGTGAAACTATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGATCCGGTAACCTCTTCTTCTTGTCTCTCTTCCCTTTTCTTTCCAGATTCTTACCAACTGAAGCTGCTGATGTCTCTGCTGCCTTGTGTGTTGTACTTCTTTTTGAAGCGGATCTTGTTTGATCTGTCTCTATTTGTTATTTCTGTAGTCGGAGACTTGGAAGACATAAAAGGCATTTTGTACGAATTTTTTTGTTTT

Coding sequence (CDS)

ATGTCGGATTGGGCACCCGTGGTCATCGGAGTTGTACTCTTCGTACTGCTTTCTCCCGGGCTTCTGTTTCAGTTTCCCGGGAATAATCGTCAGTTTGAGTTCGGGAGCATGAAGACCAACGGAAAAGCTGTTGCTATACACACTCTCATCTTCTTCGTCCTCTATGCTGTTTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGA

Protein sequence

MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFILALHIHIYTG*
BLAST of MELO3C008178 vs. TrEMBL
Match: A0A0A0LMK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406095 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.5e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL
Sbjct: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60

Query: 61 ALHIHIYTG 70
          ALHIHIYTG
Sbjct: 61 ALHIHIYTG 69

BLAST of MELO3C008178 vs. TrEMBL
Match: A0A164VTJ6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021798 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.8e-27
Identity = 56/69 (81.16%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PV+IGVVLF+LL PGLLFQFPGN++Q EFGSMKTNGK++A+HTLIFFVLYA+F+L
Sbjct: 1  MADWGPVLIGVVLFILLQPGLLFQFPGNSKQLEFGSMKTNGKSIAVHTLIFFVLYAIFVL 60

Query: 61 ALHIHIYTG 70
          ALHIHIYTG
Sbjct: 61 ALHIHIYTG 69

BLAST of MELO3C008178 vs. TrEMBL
Match: A0A068V855_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019177001 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.3e-26
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PV+IGVVLFVLL PGLLFQFPGNN+  EFGSMKTNGK++A+HTLIFF LYA+ IL
Sbjct: 1  MADWGPVLIGVVLFVLLQPGLLFQFPGNNKNLEFGSMKTNGKSIAVHTLIFFALYAILIL 60

Query: 61 ALHIHIYTG 70
          A+H+HIYTG
Sbjct: 61 AVHVHIYTG 69

BLAST of MELO3C008178 vs. TrEMBL
Match: A0A0D2PXJ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272700 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DWAPV++GVVLFVLLSPGLLF FPGN +Q EFGSMKTNGKA+AIHTL+FF +YAV I+
Sbjct: 1  MADWAPVLVGVVLFVLLSPGLLFSFPGNGKQLEFGSMKTNGKAIAIHTLLFFAIYAVLIM 60

Query: 61 ALHIHIYTG 70
          A+H+HIYTG
Sbjct: 61 AVHLHIYTG 69

BLAST of MELO3C008178 vs. TrEMBL
Match: A0A067FKC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035267mg PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PVVIGV+LFVLL PGLLFQ PG+NRQ EFGSMKTNGKA+A+H+LIFF+LYA+ IL
Sbjct: 1  MADWGPVVIGVLLFVLLQPGLLFQLPGHNRQLEFGSMKTNGKAIAVHSLIFFILYAILIL 60

Query: 61 ALHIHIYTG 70
          A+H+HIYTG
Sbjct: 61 AVHVHIYTG 69

BLAST of MELO3C008178 vs. TAIR10
Match: AT3G27030.1 (AT3G27030.1 unknown protein)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-26
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 1

Query: 1   MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
           M+DWAPV++GVVLFV+LSPGLLF  PGNNR  +FG +KTNGKA+A+HTLIFF +Y + IL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  ALHIHIYTG 70
           AL++HIYTG
Sbjct: 134 ALNLHIYTG 142


HSP 2 Score: 82.8 bits (203), Expect = 9.2e-17
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M DW PV + V LFVLL+PGLL Q PG  R  EFG+ +T+G +V +HTLI+F L  + +L
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 ALHIHI 67
          AL IHI
Sbjct: 61 ALQIHI 66

BLAST of MELO3C008178 vs. TAIR10
Match: AT5G40970.1 (AT5G40970.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-23
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTNGKA+A+HTLIFF  Y + IL
Sbjct: 1  MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query: 61 ALHIHIYTG 70
          A+++HI TG
Sbjct: 61 AVNLHITTG 69

BLAST of MELO3C008178 vs. TAIR10
Match: AT3G48660.1 (AT3G48660.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 94.0 bits (232), Expect = 4.0e-20
Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PVV+ V+LFVLL+PGLLFQ P   R  EFG+M+T+G ++ +HT+IFF L  +F +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 ALHIHIYTG 70
          A+ +HIYTG
Sbjct: 61 AIRLHIYTG 69

BLAST of MELO3C008178 vs. TAIR10
Match: AT5G63500.1 (AT5G63500.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-19
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PV+I V+LFV+LSPGLLFQ P   R  EFG+M+T+G ++ +H +IFF L  +F +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 ALHIHIYTG 70
          A+++HIY+G
Sbjct: 61 AINVHIYSG 69

BLAST of MELO3C008178 vs. TAIR10
Match: AT5G08391.1 (AT5G08391.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-18
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          MSDW PV++ V+LFV+L+PGLLFQ PG  +  EFG+ +T+  +V +H+L++F L  VF+L
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 ALHIHIYTG 70
          AL IHIY G
Sbjct: 61 ALKIHIYIG 69

BLAST of MELO3C008178 vs. NCBI nr
Match: gi|659081414|ref|XP_008441322.1| (PREDICTED: uncharacterized protein LOC103485472 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 3.6e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL
Sbjct: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60

Query: 61 ALHIHIYTG 70
          ALHIHIYTG
Sbjct: 61 ALHIHIYTG 69

BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1021033053|gb|KZM90837.1| (hypothetical protein DCAR_021798 [Daucus carota subsp. sativus])

HSP 1 Score: 128.3 bits (321), Expect = 5.4e-27
Identity = 56/69 (81.16%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DW PV+IGVVLF+LL PGLLFQFPGN++Q EFGSMKTNGK++A+HTLIFFVLYA+F+L
Sbjct: 1  MADWGPVLIGVVLFILLQPGLLFQFPGNSKQLEFGSMKTNGKSIAVHTLIFFVLYAIFVL 60

Query: 61 ALHIHIYTG 70
          ALHIHIYTG
Sbjct: 61 ALHIHIYTG 69

BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1009151971|ref|XP_015893840.1| (PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 127.5 bits (319), Expect = 9.2e-27
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1

Query: 1   MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
           M+DWAPVVIGVVLFVLL PGLLFQFPG+++Q EFGSMKTNGKA+A+HTLIFF LY +FIL
Sbjct: 74  MADWAPVVIGVVLFVLLQPGLLFQFPGHHKQLEFGSMKTNGKAIAVHTLIFFALYCIFIL 133

Query: 61  ALHIHIYTG 70
           ALH+HIYTG
Sbjct: 134 ALHVHIYTG 142

BLAST of MELO3C008178 vs. NCBI nr
Match: gi|1009151971|ref|XP_015893840.1| (PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-14
Identity = 34/69 (49.28%), Postives = 54/69 (78.26%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          MSDW PV + VVLF+LL+PGLL Q PG +R  EFG+ +T+G ++ +H++++F L  +F+L
Sbjct: 1  MSDWGPVFVAVVLFILLTPGLLIQIPGKSRFVEFGNFQTSGVSILVHSVLYFALICIFLL 60

Query: 61 ALHIHIYTG 70
          A+ +HI++G
Sbjct: 61 AIGVHIFSG 69


HSP 2 Score: 127.5 bits (319), Expect = 9.2e-27
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DWAPVVIGVVLFVLL PGLLFQFPG+++Q EFGSMKTNGKA+A+HTLIFF LY +FIL
Sbjct: 1  MADWAPVVIGVVLFVLLQPGLLFQFPGHHKQLEFGSMKTNGKAIAVHTLIFFALYCIFIL 60

Query: 61 ALHIHIYTG 70
          ALH+HIYTG
Sbjct: 61 ALHVHIYTG 69

BLAST of MELO3C008178 vs. NCBI nr
Match: gi|823254744|ref|XP_012460019.1| (PREDICTED: uncharacterized protein LOC105780313 [Gossypium raimondii])

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-26
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1

Query: 1  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 60
          M+DWAPV+IGVVLFVLLSPGLLF FPGN++Q EFGSMKTNGKA+AIHTL+FF +YAV I+
Sbjct: 1  MADWAPVLIGVVLFVLLSPGLLFSFPGNSKQLEFGSMKTNGKAIAIHTLLFFAIYAVLIV 60

Query: 61 ALHIHIYTG 70
          ALHIHIYTG
Sbjct: 61 ALHIHIYTG 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LMK8_CUCSA2.5e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406095 PE=4 SV=1[more]
A0A164VTJ6_DAUCA3.8e-2781.16Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021798 PE=4 SV=1[more]
A0A068V855_COFCA9.3e-2678.26Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019177001 PE=4 SV=1[more]
A0A0D2PXJ7_GOSRA1.2e-2578.26Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272700 PE=4 SV=1[more]
A0A067FKC6_CITSI1.2e-2578.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035267mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G27030.12.2e-2671.01 unknown protein[more]
AT5G40970.12.3e-2365.22 Protein of unknown function (DUF 3339)[more]
AT3G48660.14.0e-2056.52 Protein of unknown function (DUF 3339)[more]
AT5G63500.14.4e-1953.62 Protein of unknown function (DUF 3339)[more]
AT5G08391.11.7e-1855.07 Protein of unknown function (DUF 3339)[more]
Match NameE-valueIdentityDescription
gi|659081414|ref|XP_008441322.1|3.6e-31100.00PREDICTED: uncharacterized protein LOC103485472 [Cucumis melo][more]
gi|1021033053|gb|KZM90837.1|5.4e-2781.16hypothetical protein DCAR_021798 [Daucus carota subsp. sativus][more]
gi|1009151971|ref|XP_015893840.1|9.2e-2782.61PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba][more]
gi|1009151971|ref|XP_015893840.1|1.8e-1449.28PREDICTED: uncharacterized protein LOC107427943 isoform X2 [Ziziphus jujuba][more]
gi|823254744|ref|XP_012460019.1|3.5e-2682.61PREDICTED: uncharacterized protein LOC105780313 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021775DUF3339
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU64467melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008178T1MELO3C008178T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64467MU64467transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 1..67
score: 8.6
NoneNo IPR availablePANTHERPTHR33128FAMILY NOT NAMEDcoord: 1..69
score: 6.3

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008178CmaCh04G029780Cucurbita maxima (Rimu)cmameB679
MELO3C008178CmoCh15G000730Cucurbita moschata (Rifu)cmomeB258
MELO3C008178Cp4.1LG13g11210Cucurbita pepo (Zucchini)cpemeB167
MELO3C008178Carg06053Silver-seed gourdcarmeB0023
The following gene(s) are paralogous to this gene:

None