MELO3C008039 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008039
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein IDA-LIKE 4
Locationchr8 : 7096047 .. 7096629 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGATGATGATCATGTTTGTTGTTTGTAGAAGAAGATCAAGATCAAGATCAAAATCAAGATCGAGAAAGAAGGTTATTAGTTGGATGATGTTGTTAATAATAATGTTATTGATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAACAACAACAACAACAAGAATCTGCGTTGTTCAAATTGAAGCCTAAAAATGGTAATAATTATTACTACGGCCATTTCTTTGGTTTCTTGCCAAGAAGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAAGAAGTTGGAGATCCCCTTGAAATAGTATTCATCAATCAAATTAATTACATATTTTTTTCCCTTCTTCATAGTTGTAGTACTAAAAGGTTCATCAATCACCATCTCTCTCTTCTTTATCATTTTTCTTGTTTTTTTCTTTTTGGGAACAAATATTTTGAGACATGGGTTGATATTGTACATCGGATTGTTTCATGGGTTTAGTTTAAAATTTTCTATTTTTTTTTCTTTTTTGGTTGTTTAAAA

mRNA sequence

ATGATGATGATGATGATCATGTTTGTTGTTTGTAGAAGAAGATCAAGATCAAGATCAAAATCAAGATCGAGAAAGAAGGTTATTAGTTGGATGATGTTGTTAATAATAATGTTATTGATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAACAACAACAACAACAAGAATCTGCGTTGTTCAAATTGAAGCCTAAAAATGGTAATAATTATTACTACGGCCATTTCTTTGGTTTCTTGCCAAGAAGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAAGAAGTTGGAGATCCCCTTGAAATAGTATTCATCAATCAAATTAATTACATATTTTTTTCCCTTCTTCATAGTTGTAGTACTAAAAGGTTCATCAATCACCATCTCTCTCTTCTTTATCATTTTTCTTGTTTTTTTCTTTTTGGGAACAAATATTTTGAGACATGGGTTGATATTGTACATCGGATTGTTTCATGGGTTTAGTTTAAAATTTTCTATTTTTTTTTCTTTTTTGGTTGTTTAAAA

Coding sequence (CDS)

ATGATGATGATGATGATCATGTTTGTTGTTTGTAGAAGAAGATCAAGATCAAGATCAAAATCAAGATCGAGAAAGAAGGTTATTAGTTGGATGATGTTGTTAATAATAATGTTATTGATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAACAACAACAACAACAAGAATCTGCGTTGTTCAAATTGAAGCCTAAAAATGGTAATAATTATTACTACGGCCATTTCTTTGGTTTCTTGCCAAGAAGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAAGAAGTTGGAGATCCCCTTGA

Protein sequence

MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP*
Homology
[Close]
BLAST of MELO3C008039 vs. Swiss-Prot
Match: IDL4_ARATH (Protein IDA-LIKE 4 OS=Arabidopsis thaliana GN=IDL4 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-08
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 71  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           S++F   P    + N    GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Sbjct: 42  SSVFYRNPNYDHSNNTVRRGHFLGFLPRHLPVPASAPSRKHNDIGIQALLSP 93

[Close]
BLAST of MELO3C008039 vs. Swiss-Prot
Match: IDL2_ARATH (Protein IDA-LIKE 2 OS=Arabidopsis thaliana GN=IDL2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-07
Identity = 38/108 (35.19%), Postives = 48/108 (44.44%), Query Frame = 1 

Query: 13  RRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESA 72
           R  RSR  S       +  +LL+++LL+          CN +             +  + 
Sbjct: 4   RNQRSRITSSFFVSFFTRTILLLLILLLG--------FCNGA-------------RTNTN 63

Query: 73  LFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGLRSW 117
           +F  KP   +N         F GFLPR  P+PASGPSRKHNDIGL SW
Sbjct: 64  VFNSKPHKKHNDAVSSSTKQFLGFLPRHFPVPASGPSRKHNDIGLLSW 90

[Close]
BLAST of MELO3C008039 vs. Swiss-Prot
Match: IDL3_ARATH (Protein IDA-LIKE 3 OS=Arabidopsis thaliana GN=IDL3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-06
Identity = 33/106 (31.13%), Postives = 52/106 (49.06%), Query Frame = 1 

Query: 17  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKL 76
           S    RSRK  ++  + ++++LL+      L+ CCN +    TN        ++  +   
Sbjct: 2   SSRSHRSRKYQLTRTIPILVLLLV------LLSCCNGAR--TTNVFNTSSPPKQKDVVSP 61

Query: 77  KPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLRSWRS 119
              + ++    H    F G LPR+ P+P SGPSRKHN+IGL S ++
Sbjct: 62  PHDHVHHQVQDHKSVQFLGSLPRQFPVPTSGPSRKHNEIGLSSTKT 99

[Close]
BLAST of MELO3C008039 vs. TrEMBL
Match: A0A0A0KFQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484020 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.8e-44
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 1 

Query: 31  MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKLKPKNGNNYYYGHFF 90
           MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESAL KLKPKNGNNYYYGHFF
Sbjct: 1   MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKNGNNYYYGHFF 60

Query: 91  GFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 61  GFLPRRIPIPASGPSRKHNDIGLRSWRSP 89

[Close]
BLAST of MELO3C008039 vs. TrEMBL
Match: M5W2Q5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025503mg PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-12
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 73  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           +FKLKPK  ++   GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 34  VFKLKPKYQHS---GHFSGFLPRRIPIPASGPSRKHNDIGLRSWRSP 77

[Close]
BLAST of MELO3C008039 vs. TrEMBL
Match: A0A0D2SF39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G064600 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-11
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 1 

Query: 73  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           +FK+KPK     Y GHF GFLPRR PIPASGPSRKHND+GL+SWRSP
Sbjct: 34  VFKIKPKP---QYEGHFLGFLPRRFPIPASGPSRKHNDLGLQSWRSP 77

[Close]
BLAST of MELO3C008039 vs. TrEMBL
Match: A0A151TLA3_CAJCA (Protein IDA-LIKE 2 OS=Cajanus cajan GN=KK1_024188 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-11
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1 

Query: 73  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           +FK +PK+    ++GHFFGFLP+R+PIP S PSRKHNDIGLRSWRSP
Sbjct: 32  VFKFRPKS---QHHGHFFGFLPKRMPIPYSTPSRKHNDIGLRSWRSP 75

[Close]
BLAST of MELO3C008039 vs. TrEMBL
Match: A0A0B2RB07_GLYSO (Protein IDA-LIKE 4 OS=Glycine soja GN=glysoja_008493 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-10
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 71  SALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           + +FK KPK+    ++GHF GFLP+R+PIP S PSRKHNDIGLRSWRSP
Sbjct: 7   TTVFKFKPKS---QHHGHFSGFLPKRMPIPYSTPSRKHNDIGLRSWRSP 52

[Close]
BLAST of MELO3C008039 vs. TAIR10
Match: AT3G18715.1 (AT3G18715.1 inflorescence deficient in abscission (IDA)-like 4)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 71  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           S++F   P    + N    GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Sbjct: 42  SSVFYRNPNYDHSNNTVRRGHFLGFLPRHLPVPASAPSRKHNDIGIQALLSP 93

[Close]
BLAST of MELO3C008039 vs. TAIR10
Match: AT5G64667.1 (AT5G64667.1 inflorescence deficient in abscission (IDA)-like 2)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08
Identity = 38/108 (35.19%), Postives = 48/108 (44.44%), Query Frame = 1 

Query: 13  RRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESA 72
           R  RSR  S       +  +LL+++LL+          CN +             +  + 
Sbjct: 4   RNQRSRITSSFFVSFFTRTILLLLILLLG--------FCNGA-------------RTNTN 63

Query: 73  LFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGLRSW 117
           +F  KP   +N         F GFLPR  P+PASGPSRKHNDIGL SW
Sbjct: 64  VFNSKPHKKHNDAVSSSTKQFLGFLPRHFPVPASGPSRKHNDIGLLSW 90

[Close]
BLAST of MELO3C008039 vs. TAIR10
Match: AT5G09805.1 (AT5G09805.1 inflorescence deficient in abscission (IDA)-like 3)

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 33/106 (31.13%), Postives = 52/106 (49.06%), Query Frame = 1 

Query: 17  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKL 76
           S    RSRK  ++  + ++++LL+      L+ CCN +    TN        ++  +   
Sbjct: 2   SSRSHRSRKYQLTRTIPILVLLLV------LLSCCNGAR--TTNVFNTSSPPKQKDVVSP 61

Query: 77  KPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLRSWRS 119
              + ++    H    F G LPR+ P+P SGPSRKHN+IGL S ++
Sbjct: 62  PHDHVHHQVQDHKSVQFLGSLPRQFPVPTSGPSRKHNEIGLSSTKT 99

[Close]
BLAST of MELO3C008039 vs. TAIR10
Match: AT1G76952.1 (AT1G76952.1 inflorescence deficient in abscission (IDA)-like 5)

HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06
Identity = 33/105 (31.43%), Postives = 49/105 (46.67%), Query Frame = 1 

Query: 26  KVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKLKPKNGNNYY 85
           K I  MM+L++M++M     +    C A S    +   + Q+      FK++  N  N++
Sbjct: 4   KRIKAMMILVVMIMMVFSWRI----CEADSLRRYSSSSRPQR-----FFKVRRPNPRNHH 63

Query: 86  YGH------------FFGFLPRRIPIPASGPSRKHNDIGLRSWRS 119
           + +            F GFLP+ +PIP S PSRKHN  GL+   S
Sbjct: 64  HQNQGFNGDDYPPESFSGFLPKTLPIPHSAPSRKHNVYGLQRTNS 99

[Close]
BLAST of MELO3C008039 vs. NCBI nr
Match: gi|659080869|ref|XP_008441023.1| (PREDICTED: protein IDA-LIKE 2-like [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 5.2e-62
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 

Query: 1   MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATN 60
           MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATN
Sbjct: 1   MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATN 60

Query: 61  KQQQQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           KQQQQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 61  KQQQQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 119

[Close]
BLAST of MELO3C008039 vs. NCBI nr
Match: gi|700193169|gb|KGN48373.1| (hypothetical protein Csa_6G484020 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 8.4e-44
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 1 

Query: 31  MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALFKLKPKNGNNYYYGHFF 90
           MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESAL KLKPKNGNNYYYGHFF
Sbjct: 1   MMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKNGNNYYYGHFF 60

Query: 91  GFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 61  GFLPRRIPIPASGPSRKHNDIGLRSWRSP 89

[Close]
BLAST of MELO3C008039 vs. NCBI nr
Match: gi|645218654|ref|XP_008231703.1| (PREDICTED: protein IDA-LIKE 4 [Prunus mume])

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-12
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 73  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           +FKLKPK  ++   GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 34  VFKLKPKYQHS---GHFTGFLPRRIPIPASGPSRKHNDIGLRSWRSP 77

[Close]
BLAST of MELO3C008039 vs. NCBI nr
Match: gi|595834037|ref|XP_007206785.1| (hypothetical protein PRUPE_ppa025503mg [Prunus persica])

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-12
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 73  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           +FKLKPK  ++   GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 34  VFKLKPKYQHS---GHFSGFLPRRIPIPASGPSRKHNDIGLRSWRSP 77

[Close]
BLAST of MELO3C008039 vs. NCBI nr
Match: gi|731388038|ref|XP_010649464.1| (PREDICTED: protein IDA-LIKE 4-like [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 4.9e-12
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 69  QESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 120
           + S +FKLKP++ N+   GHF GFLPR +PIPASGPSRKHNDIGL+SWRSP
Sbjct: 29  RSSQVFKLKPRSHNS---GHFLGFLPRALPIPASGPSRKHNDIGLQSWRSP 76

The following BLAST results are available for this feature:
BLAST of MELO3C008039 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IDL4_ARATH5.7e-0851.92Protein IDA-LIKE 4 OS=Arabidopsis thaliana GN=IDL4 PE=2 SV=1[more]
IDL2_ARATH2.2e-0735.19Protein IDA-LIKE 2 OS=Arabidopsis thaliana GN=IDL2 PE=2 SV=1[more]
IDL3_ARATH4.1e-0631.13Protein IDA-LIKE 3 OS=Arabidopsis thaliana GN=IDL3 PE=2 SV=1[more]
BLAST of MELO3C008039 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ3_CUCSA5.8e-4498.88Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484020 PE=4 SV=1[more]
M5W2Q5_PRUPE2.6e-1280.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025503mg PE=4 SV=1[more]
A0A0D2SF39_GOSRA1.3e-1174.47Uncharacterized protein OS=Gossypium raimondii GN=B456_007G064600 PE=4 SV=1[more]
A0A151TLA3_CAJCA8.5e-1170.21Protein IDA-LIKE 2 OS=Cajanus cajan GN=KK1_024188 PE=4 SV=1[more]
A0A0B2RB07_GLYSO2.5e-1067.35Protein IDA-LIKE 4 OS=Glycine soja GN=glysoja_008493 PE=4 SV=1[more]
BLAST of MELO3C008039 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18715.13.2e-0951.92 inflorescence deficient in abscission (IDA)-like 4[more]
AT5G64667.11.2e-0835.19 inflorescence deficient in abscission (IDA)-like 2[more]
AT5G09805.12.3e-0731.13 inflorescence deficient in abscission (IDA)-like 3[more]
AT1G76952.17.4e-0631.43 inflorescence deficient in abscission (IDA)-like 5[more]
BLAST of MELO3C008039 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080869|ref|XP_008441023.1|5.2e-62100.00PREDICTED: protein IDA-LIKE 2-like [Cucumis melo][more]
gi|700193169|gb|KGN48373.1|8.4e-4498.88hypothetical protein Csa_6G484020 [Cucumis sativus][more]
gi|645218654|ref|XP_008231703.1|3.8e-1280.85PREDICTED: protein IDA-LIKE 4 [Prunus mume][more]
gi|595834037|ref|XP_007206785.1|3.8e-1280.85hypothetical protein PRUPE_ppa025503mg [Prunus persica][more]
gi|731388038|ref|XP_010649464.1|4.9e-1270.59PREDICTED: protein IDA-LIKE 4-like [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008039T1MELO3C008039T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33599FAMILY NOT NAMEDcoord: 14..119
score: 2.5
NoneNo IPR availablePANTHERPTHR33599:SF2PROTEIN IDA-LIKE 3-RELATEDcoord: 14..119
score: 2.5