Cla97C01G014520 (gene) Watermelon (97103) v2

NameCla97C01G014520
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionProtein IDA-LIKE 2
LocationCla97Chr01 : 28290826 .. 28291032 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTATTGATGAATGAAGAGTTATTGATTTGCTGCAATGCTTCACCAACCAACAAACAAGCCTTCTTCAAGTTGAAGCCTAAAAAGGGTAATTATTATTATGGTCATTTCTTTGGATTCTTGCCTAGAAGAATTCCCATTCCTGCCTCTGGCCCTTCAAGAAAACACAACGATATTGGCTTAAGAAGCTGGAGATCGCCTTGA

mRNA sequence

ATGTTGTTATTGATGAATGAAGAGTTATTGATTTGCTGCAATGCTTCACCAACCAACAAACAAGCCTTCTTCAAGTTGAAGCCTAAAAAGGGTAATTATTATTATGGTCATTTCTTTGGATTCTTGCCTAGAAGAATTCCCATTCCTGCCTCTGGCCCTTCAAGAAAACACAACGATATTGGCTTAAGAAGCTGGAGATCGCCTTGA

Coding sequence (CDS)

ATGTTGTTATTGATGAATGAAGAGTTATTGATTTGCTGCAATGCTTCACCAACCAACAAACAAGCCTTCTTCAAGTTGAAGCCTAAAAAGGGTAATTATTATTATGGTCATTTCTTTGGATTCTTGCCTAGAAGAATTCCCATTCCTGCCTCTGGCCCTTCAAGAAAACACAACGATATTGGCTTAAGAAGCTGGAGATCGCCTTGA

Protein sequence

MLLLMNEELLICCNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
BLAST of Cla97C01G014520 vs. NCBI nr
Match: ONI01802.1 (hypothetical protein PRUPE_6G159700 [Prunus persica])

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-13
Identity = 42/56 (75.00%), Postives = 45/56 (80.36%), Query Frame = 0

Query: 13 CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 69
          C+AS T +   FKLKPK    + GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 26 CHASRTAQ--VFKLKPK--YQHSGHFSGFLPRRIPIPASGPSRKHNDIGLRSWRSP 77

BLAST of Cla97C01G014520 vs. NCBI nr
Match: XP_007048294.2 (PREDICTED: protein IDA-LIKE 2 [Theobroma cacao])

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-12
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0

Query: 3  LLMNEELLIC-CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIG 62
          LL+   +++C C+ S T     FK+KPK  + Y GHF GFLPR  PIPASGPSRKHND+G
Sbjct: 14 LLVMFTIIVCHCHGSRTTN--VFKIKPK--SQYTGHFLGFLPRHFPIPASGPSRKHNDLG 73

Query: 63 LRSWRSP 69
          L+SWRSP
Sbjct: 74 LQSWRSP 76

BLAST of Cla97C01G014520 vs. NCBI nr
Match: KJB40456.1 (hypothetical protein B456_007G064600 [Gossypium raimondii])

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-12
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIG 61
          LLL+   L   C+ S       FK+KPK    Y GHF GFLPRR PIPASGPSRKHND+G
Sbjct: 14 LLLIFTFLACHCHGSRLTTNV-FKIKPKP--QYEGHFLGFLPRRFPIPASGPSRKHNDLG 73

Query: 62 LRSWRSP 69
          L+SWRSP
Sbjct: 74 LQSWRSP 77

BLAST of Cla97C01G014520 vs. NCBI nr
Match: XP_015165741.1 (PREDICTED: protein IDA-LIKE 2-like [Solanum tuberosum])

HSP 1 Score: 79.3 bits (194), Expect = 5.5e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 13 CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRS-WRSP 69
          C+ S +N Q F  +  ++ +Y +GHF+ FLP+RIPIPASGPSRKHNDIGL+S WR P
Sbjct: 26 CHGSRSNSQVFNTINSQRNSYNHGHFWNFLPKRIPIPASGPSRKHNDIGLKSTWRLP 82

BLAST of Cla97C01G014520 vs. NCBI nr
Match: XP_015057956.1 (PREDICTED: protein IDA-LIKE 2-like [Solanum pennellii])

HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 13 CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRS-WRSP 69
          C+ S +N Q F  +  ++ +Y +GHF+  LP+RIPIPASGPSRKHNDIGL+S WRSP
Sbjct: 26 CHGSRSNSQVFNTINNQRNSYNHGHFWNLLPKRIPIPASGPSRKHNDIGLKSTWRSP 82

BLAST of Cla97C01G014520 vs. TrEMBL
Match: tr|M5W2Q5|M5W2Q5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G159700 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-13
Identity = 42/56 (75.00%), Postives = 45/56 (80.36%), Query Frame = 0

Query: 13 CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 69
          C+AS T +   FKLKPK    + GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Sbjct: 26 CHASRTAQ--VFKLKPK--YQHSGHFSGFLPRRIPIPASGPSRKHNDIGLRSWRSP 77

BLAST of Cla97C01G014520 vs. TrEMBL
Match: tr|A0A0D2SF39|A0A0D2SF39_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G064600 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-12
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIG 61
          LLL+   L   C+ S       FK+KPK    Y GHF GFLPRR PIPASGPSRKHND+G
Sbjct: 14 LLLIFTFLACHCHGSRLTTNV-FKIKPKP--QYEGHFLGFLPRRFPIPASGPSRKHNDLG 73

Query: 62 LRSWRSP 69
          L+SWRSP
Sbjct: 74 LQSWRSP 77

BLAST of Cla97C01G014520 vs. TrEMBL
Match: tr|A0A2P6RS79|A0A2P6RS79_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0120121 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-12
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0

Query: 24 FKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 69
          FK+KP K + Y GHF GFLPRRIPIPASGPSRKHN IGL++WRSP
Sbjct: 51 FKMKP-KNHQYSGHFLGFLPRRIPIPASGPSRKHNGIGLKAWRSP 94

BLAST of Cla97C01G014520 vs. TrEMBL
Match: tr|A0A1S3E7X2|A0A1S3E7X2_CICAR (protein IDA-LIKE 2-like OS=Cicer arietinum OX=3827 GN=LOC101506104 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 3  LLMNEELLIC----CNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHN 62
          LL+   LL+C    C+ S TN    FK KPK    + GHFFGFLPRRIPIP S PSRKHN
Sbjct: 12 LLLLFILLLCIFGYCHGSRTNN--VFKAKPK--YQHTGHFFGFLPRRIPIPFSSPSRKHN 71

Query: 63 DIGLRSWRSP 69
          DIGL+ W+SP
Sbjct: 72 DIGLQRWKSP 77

BLAST of Cla97C01G014520 vs. TrEMBL
Match: tr|A0A151TLA3|A0A151TLA3_CAJCA (Protein IDA-LIKE 2 OS=Cajanus cajan OX=3821 GN=KK1_024188 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-11
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0

Query: 12 CCNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP 69
          C  +  TN    FK +PK  + ++GHFFGFLP+R+PIP S PSRKHNDIGLRSWRSP
Sbjct: 24 CHGSRATN---VFKFRPK--SQHHGHFFGFLPKRMPIPYSTPSRKHNDIGLRSWRSP 75

BLAST of Cla97C01G014520 vs. Swiss-Prot
Match: sp|Q6DUW9|IDL2_ARATH (Protein IDA-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=IDL2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-10
Identity = 35/68 (51.47%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYYYG----HFFGFLPRRIPIPASGPSRKH 61
          +LL    LL  CN + TN   F     KK N         F GFLPR  P+PASGPSRKH
Sbjct: 23 ILLXXXXLLGFCNGARTNTNVFNSKPHKKHNDAVSSSTKQFLGFLPRHFPVPASGPSRKH 82

Query: 62 NDIGLRSW 66
          NDIGL SW
Sbjct: 83 NDIGLLSW 90

BLAST of Cla97C01G014520 vs. Swiss-Prot
Match: sp|Q6DUW6|IDL4_ARATH (Protein IDA-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=IDL4 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-08
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 0

Query: 1  MLLLMNEELLICCNASPTNKQAFFKLKP----KKGNYYYGHFFGFLPRRIPIPASGPSRK 60
          +LL++    +  C+AS  +  + F   P           GHF GFLPR +P+PAS PSRK
Sbjct: 22 LLLILCLFFIHHCDASRFSSSSVFYRNPNYDHSNNTVRRGHFLGFLPRHLPVPASAPSRK 81

Query: 61 HNDIGLRSWRSP 69
          HNDIG+++  SP
Sbjct: 82 HNDIGIQALLSP 93

BLAST of Cla97C01G014520 vs. Swiss-Prot
Match: sp|Q6DUW7|IDL3_ARATH (Protein IDA-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=IDL3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-05
Identity = 27/81 (33.33%), Postives = 39/81 (48.15%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYY---YGH------------FFGFLPRRI 61
          +L++      CCN + T         PK+ +     + H            F G LPR+ 
Sbjct: 19 ILVLXXXXXXCCNGARTTNVFNTSSPPKQKDVVSPPHDHVHHQVQDHKSVQFLGSLPRQF 78

Query: 62 PIPASGPSRKHNDIGLRSWRS 68
          P+P SGPSRKHN+IGL S ++
Sbjct: 79 PVPTSGPSRKHNEIGLSSTKT 99

BLAST of Cla97C01G014520 vs. Swiss-Prot
Match: sp|Q6DUW8|IDL5_ARATH (Protein IDA-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=IDL5 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 2.9e-04
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 0

Query: 15 ASPTNKQAFFKL-KPKKGNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIG 68
          +S +  Q FFK+ +P   N+++ +            F GFLP+ +PIP S PSRKHN  G
Sbjct: 34 SSSSRPQRFFKVRRPNPRNHHHQNQGFNGDDYPPESFSGFLPKTLPIPHSAPSRKHNVYG 93

BLAST of Cla97C01G014520 vs. TAIR10
Match: AT5G64667.1 (inflorescence deficient in abscission (IDA)-like 2)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-11
Identity = 35/68 (51.47%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYYYG----HFFGFLPRRIPIPASGPSRKH 61
          +LL    LL  CN + TN   F     KK N         F GFLPR  P+PASGPSRKH
Sbjct: 23 ILLXXXXLLGFCNGARTNTNVFNSKPHKKHNDAVSSSTKQFLGFLPRHFPVPASGPSRKH 82

Query: 62 NDIGLRSW 66
          NDIGL SW
Sbjct: 83 NDIGLLSW 90

BLAST of Cla97C01G014520 vs. TAIR10
Match: AT3G18715.1 (inflorescence deficient in abscission (IDA)-like 4)

HSP 1 Score: 60.1 bits (144), Expect = 6.2e-10
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 0

Query: 1  MLLLMNEELLICCNASPTNKQAFFKLKP----KKGNYYYGHFFGFLPRRIPIPASGPSRK 60
          +LL++    +  C+AS  +  + F   P           GHF GFLPR +P+PAS PSRK
Sbjct: 22 LLLILCLFFIHHCDASRFSSSSVFYRNPNYDHSNNTVRRGHFLGFLPRHLPVPASAPSRK 81

Query: 61 HNDIGLRSWRSP 69
          HNDIG+++  SP
Sbjct: 82 HNDIGIQALLSP 93

BLAST of Cla97C01G014520 vs. TAIR10
Match: AT5G09805.1 (inflorescence deficient in abscission (IDA)-like 3)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-06
Identity = 27/81 (33.33%), Postives = 39/81 (48.15%), Query Frame = 0

Query: 2  LLLMNEELLICCNASPTNKQAFFKLKPKKGNYY---YGH------------FFGFLPRRI 61
          +L++      CCN + T         PK+ +     + H            F G LPR+ 
Sbjct: 19 ILVLXXXXXXCCNGARTTNVFNTSSPPKQKDVVSPPHDHVHHQVQDHKSVQFLGSLPRQF 78

Query: 62 PIPASGPSRKHNDIGLRSWRS 68
          P+P SGPSRKHN+IGL S ++
Sbjct: 79 PVPTSGPSRKHNEIGLSSTKT 99

BLAST of Cla97C01G014520 vs. TAIR10
Match: AT1G76952.1 (inflorescence deficient in abscission (IDA)-like 5)

HSP 1 Score: 45.4 bits (106), Expect = 1.6e-05
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 0

Query: 15 ASPTNKQAFFKL-KPKKGNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIG 68
          +S +  Q FFK+ +P   N+++ +            F GFLP+ +PIP S PSRKHN  G
Sbjct: 34 SSSSRPQRFFKVRRPNPRNHHHQNQGFNGDDYPPESFSGFLPKTLPIPHSAPSRKHNVYG 93

BLAST of Cla97C01G014520 vs. TAIR10
Match: AT1G68765.1 (Putative membrane lipoprotein)

HSP 1 Score: 40.8 bits (94), Expect = 3.9e-04
Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 0

Query: 12 CCNASPTNKQAFFKLKPKKGNYYYGHFFGFLPRRIPIPASGPSRKHN 59
          C  A+        K   K+  +   H FG+LP+ +PIP S PS++HN
Sbjct: 23 CVAAARIGATMEMKKNIKRLTFKNSHIFGYLPKGVPIPPSAPSKRHN 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ONI01802.13.8e-1375.00hypothetical protein PRUPE_6G159700 [Prunus persica][more]
XP_007048294.21.4e-1259.70PREDICTED: protein IDA-LIKE 2 [Theobroma cacao][more]
KJB40456.13.2e-1261.19hypothetical protein B456_007G064600 [Gossypium raimondii][more]
XP_015165741.15.5e-1259.65PREDICTED: protein IDA-LIKE 2-like [Solanum tuberosum][more]
XP_015057956.17.1e-1259.65PREDICTED: protein IDA-LIKE 2-like [Solanum pennellii][more]
Match NameE-valueIdentityDescription
tr|M5W2Q5|M5W2Q5_PRUPE2.5e-1375.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G159700 PE=4 SV=1[more]
tr|A0A0D2SF39|A0A0D2SF39_GOSRA2.1e-1261.19Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G064600 PE=4 ... [more]
tr|A0A2P6RS79|A0A2P6RS79_ROSCH6.2e-1277.78Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0120121 PE=4... [more]
tr|A0A1S3E7X2|A0A1S3E7X2_CICAR1.4e-1160.00protein IDA-LIKE 2-like OS=Cicer arietinum OX=3827 GN=LOC101506104 PE=4 SV=1[more]
tr|A0A151TLA3|A0A151TLA3_CAJCA3.1e-1163.16Protein IDA-LIKE 2 OS=Cajanus cajan OX=3821 GN=KK1_024188 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q6DUW9|IDL2_ARATH2.0e-1051.47Protein IDA-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=IDL2 PE=2 SV=1[more]
sp|Q6DUW6|IDL4_ARATH1.1e-0841.67Protein IDA-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=IDL4 PE=2 SV=1[more]
sp|Q6DUW7|IDL3_ARATH4.4e-0533.33Protein IDA-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=IDL3 PE=2 SV=1[more]
sp|Q6DUW8|IDL5_ARATH2.9e-0437.88Protein IDA-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=IDL5 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
AT5G64667.11.1e-1151.47inflorescence deficient in abscission (IDA)-like 2[more]
AT3G18715.16.2e-1041.67inflorescence deficient in abscission (IDA)-like 4[more]
AT5G09805.12.4e-0633.33inflorescence deficient in abscission (IDA)-like 3[more]
AT1G76952.11.6e-0537.88inflorescence deficient in abscission (IDA)-like 5[more]
AT1G68765.13.9e-0436.17Putative membrane lipoprotein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010227 floral organ abscission
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
cellular_component GO:0005615 extracellular space
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G014520.1Cla97C01G014520.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33599FAMILY NOT NAMEDcoord: 2..67
NoneNo IPR availablePANTHERPTHR33599:SF2PROTEIN IDA-LIKE 2-RELATEDcoord: 2..67

The following gene(s) are paralogous to this gene:

None