MELO3C007471 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C007471
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S9, chloroplastic
Locationchr8 : 3019623 .. 3019868 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGAAGAGATATTACAGAGTGGTGAATAACAAGAATAATGGAAATAAGAGACAAGAAAAGAACAACAACAATAGCAATAGCAATAATTCATCATGGTCGCCAATTTCAGATCTCAAATTACCACAACAACTAGCAAATGGAGATCAAGATGTTCAAACCCAGATCGACAATGTCCTCCATGGCCCCAAAACGACTACTCGTTTGCTGGTATTCAAACAAATTTGCCCTGATCAAAATTGA

mRNA sequence

ATGGATCAGAAGAGATATTACAGAGTGGTGAATAACAAGAATAATGGAAATAAGAGACAAGAAAAGAACAACAACAATAGCAATAGCAATAATTCATCATGGTCGCCAATTTCAGATCTCAAATTACCACAACAACTAGCAAATGGAGATCAAGATGTTCAAACCCAGATCGACAATGTCCTCCATGGCCCCAAAACGACTACTCGTTTGCTGGTATTCAAACAAATTTGCCCTGATCAAAATTGA

Coding sequence (CDS)

ATGGATCAGAAGAGATATTACAGAGTGGTGAATAACAAGAATAATGGAAATAAGAGACAAGAAAAGAACAACAACAATAGCAATAGCAATAATTCATCATGGTCGCCAATTTCAGATCTCAAATTACCACAACAACTAGCAAATGGAGATCAAGATGTTCAAACCCAGATCGACAATGTCCTCCATGGCCCCAAAACGACTACTCGTTTGCTGGTATTCAAACAAATTTGCCCTGATCAAAATTGA

Protein sequence

MDQKRYYRVVNNKNNGNKRQEKNNNNSNSNNSSWSPISDLKLPQQLANGDQDVQTQIDNVLHGPKTTTRLLVFKQICPDQN*
Homology
[Close]
BLAST of MELO3C007471 vs. TrEMBL
Match: A0A0A0KHZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486965 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.0e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 1 

Query: 1  MDQKRYYRVVNNKNNG-NKRQEKNNNNSNSNNSSWSPISDLKLPQQLANGDQDVQTQIDN 60
          MDQKRYYRVVNNKNNG NK+QEKNNNN+NS NSSWSPISDLKLPQQLANGDQDVQTQIDN
Sbjct: 1  MDQKRYYRVVNNKNNGINKKQEKNNNNNNS-NSSWSPISDLKLPQQLANGDQDVQTQIDN 60

Query: 61 VLHGPKTTTRLLVFKQICPDQN 82
          VLHGPKTT RLLVFKQICPDQN
Sbjct: 61 VLHGPKTTARLLVFKQICPDQN 81

[Close]
BLAST of MELO3C007471 vs. NCBI nr
Match: gi|700193220|gb|KGN48424.1| (hypothetical protein Csa_6G486965 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.8e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 1 

Query: 1  MDQKRYYRVVNNKNNG-NKRQEKNNNNSNSNNSSWSPISDLKLPQQLANGDQDVQTQIDN 60
          MDQKRYYRVVNNKNNG NK+QEKNNNN+NS NSSWSPISDLKLPQQLANGDQDVQTQIDN
Sbjct: 1  MDQKRYYRVVNNKNNGINKKQEKNNNNNNS-NSSWSPISDLKLPQQLANGDQDVQTQIDN 60

Query: 61 VLHGPKTTTRLLVFKQICPDQN 82
          VLHGPKTT RLLVFKQICPDQN
Sbjct: 61 VLHGPKTTARLLVFKQICPDQN 81

The following BLAST results are available for this feature:
BLAST of MELO3C007471 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHZ5_CUCSA2.0e-3593.90Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486965 PE=4 SV=1[more]
BLAST of MELO3C007471 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193220|gb|KGN48424.1|2.8e-3593.90hypothetical protein Csa_6G486965 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007471T1MELO3C007471T1mRNA