MELO3C007317.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007317.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr08 : 2145126 .. 2145757 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCATTACTTAACAATCTTCTTCTTCTTCTTCTTTCTCTCACTTAATCAGAAGCTTAGATAGATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGACTGTGGCGGCCGAGGAAGGGAACGAGTTAATCGGGACCGTTGAGTTGGTTTTTTGAAAAATCGACGGTCCTGATTTTCCGAGTGTGAGCGGTTCAAATTTTATCGAACGTCACAGATTAGACCCTGAGAGATCTTCCGAATTGTTAATTGAAAGAAGAGGAAGAACCCGACATGGCCTTTTTTCCATGGCGTCAATCAATTTGTGTGTGTAATTTTTTTTTTTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGAAGTAATGTAAATGAAGTGTTTGAGGGAATATGGAACTCTCGTTTTTGTTTATTTTGGTTATTGAATTGAAGGGTTAAATGAAAGATTTGATT

mRNA sequence

AAGCATTACTTAACAATCTTCTTCTTCTTCTTCTTTCTCTCACTTAATCAGAAGCTTAGATAGATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGACTGTGGCGGCCGAGGAAGGGAACGAGTTAATCGGGACCGTTGAGTTGGTTTTTTGAAAAATCGACGGTCCTGATTTTCCGAGTGTGAGCGGTTCAAATTTTATCGAACGTCACAGATTAGACCCTGAGAGATCTTCCGAATTGTTAATTGAAAGAAGAGGAAGAACCCGACATGGCCTTTTTTCCATGGCGTCAATCAATTTGTGTGTGTAATTTTTTTTTTTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGAAGTAATGTAAATGAAGTGTTTGAGGGAATATGGAACTCTCGTTTTTGTTTATTTTGGTTATTGAATTGAAGGGTTAAATGAAAGATTTGATT

Coding sequence (CDS)

ATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGA

Protein sequence

MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK
Homology
[Close]
BLAST of MELO3C007317.2 vs. NCBI nr
Match: KGN49192.1 (hypothetical protein Csa_6G517000 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-16
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAGTRINAIN GNLSRK SDRLIPKRGQVKL IIVGIAHSVTSIFS+GSRK
Sbjct: 1  MAGTRINAINHGNLSRKCSDRLIPKRGQVKLGIIVGIAHSVTSIFSHGSRK 51

[Close]
BLAST of MELO3C007317.2 vs. NCBI nr
Match: OMO76568.1 (hypothetical protein CCACVL1_15597 [Corchorus capsularis])

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-08
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   INGGNLS +   R IP+RGQVK+AI+VGIAHSV SIFS  SR+
Sbjct: 1  MAGARRELINGGNLSSRIVARPIPRRGQVKVAILVGIAHSVASIFSLTSRR 51

[Close]
BLAST of MELO3C007317.2 vs. NCBI nr
Match: OAY26324.1 (hypothetical protein MANES_16G038800 [Manihot esculenta])

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-08
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   ING  +SR  S R IPKRGQVK+AI+VG+AHSV SIFS  SR+
Sbjct: 1  MAGARAAMINGRKISRSSSGRPIPKRGQVKVAIVVGLAHSVASIFSLNSRR 51

[Close]
BLAST of MELO3C007317.2 vs. NCBI nr
Match: OAY24745.1 (hypothetical protein MANES_17G040600 [Manihot esculenta])

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-08
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2  AGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          AG R N INGGN    YS RLIPKRGQVK+AI++G+AHS  SIFS  SR+
Sbjct: 4  AGARRNMINGGN----YSQRLIPKRGQVKVAIVLGLAHSFASIFSTRSRR 49

[Close]
BLAST of MELO3C007317.2 vs. NCBI nr
Match: KJB53424.1 (hypothetical protein B456_009G172100 [Gossypium raimondii])

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   INGGN S + + R IP+RGQVK+AI++GIAHS  SIFS  SR+
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]
BLAST of MELO3C007317.2 vs. TrEMBL
Match: tr|A0A0A0KLE0|A0A0A0KLE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-16
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAGTRINAIN GNLSRK SDRLIPKRGQVKL IIVGIAHSVTSIFS+GSRK
Sbjct: 1  MAGTRINAINHGNLSRKCSDRLIPKRGQVKLGIIVGIAHSVTSIFSHGSRK 51

[Close]
BLAST of MELO3C007317.2 vs. TrEMBL
Match: tr|F6GYY0|F6GYY0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-09
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   INGGN S+++S R IPKRGQVK+ I+VG+AHSV SIFS G R+
Sbjct: 1  MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFSLGGRR 51

[Close]
BLAST of MELO3C007317.2 vs. TrEMBL
Match: tr|F6GYY1|F6GYY1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-08
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R + INGG+ S+++S R IPKRGQVK+AI VG AHSV SIFS G R+
Sbjct: 1  MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIFSLGGRR 51

[Close]
BLAST of MELO3C007317.2 vs. TrEMBL
Match: tr|A0A1R3I1W3|A0A1R3I1W3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15597 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-08
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   INGGNLS +   R IP+RGQVK+AI+VGIAHSV SIFS  SR+
Sbjct: 1  MAGARRELINGGNLSSRIVARPIPRRGQVKVAILVGIAHSVASIFSLTSRR 51

[Close]
BLAST of MELO3C007317.2 vs. TrEMBL
Match: tr|A0A2C9U9G9|A0A2C9U9G9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G038800 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-08
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 52
          MAG R   ING  +SR  S R IPKRGQVK+AI+VG+AHSV SIFS  SR+
Sbjct: 1  MAGARAAMINGRKISRSSSGRPIPKRGQVKVAIVVGLAHSVASIFSLNSRR 51

The following BLAST results are available for this feature:
BLAST of MELO3C007317.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49192.13.6e-1692.16hypothetical protein Csa_6G517000 [Cucumis sativus][more]
OMO76568.12.7e-0866.67hypothetical protein CCACVL1_15597 [Corchorus capsularis][more]
OAY26324.14.7e-0864.71hypothetical protein MANES_16G038800 [Manihot esculenta][more]
OAY24745.18.0e-0866.00hypothetical protein MANES_17G040600 [Manihot esculenta][more]
KJB53424.11.8e-0760.78hypothetical protein B456_009G172100 [Gossypium raimondii][more]
BLAST of MELO3C007317.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C007317.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007317.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLE0|A0A0A0KLE0_CUCSA2.4e-1692.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1[more]
tr|F6GYY0|F6GYY0_VITVI2.8e-0964.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=... [more]
tr|F6GYY1|F6GYY1_VITVI1.1e-0864.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=... [more]
tr|A0A1R3I1W3|A0A1R3I1W3_COCAP1.8e-0866.67Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15597 PE=4 ... [more]
tr|A0A2C9U9G9|A0A2C9U9G9_MANES3.1e-0864.71Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G038800 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007317.2.1MELO3C007317.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36615FAMILY NOT NAMEDcoord: 1..50
NoneNo IPR availablePANTHERPTHR36615:SF2SUBFAMILY NOT NAMEDcoord: 1..50

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007317.2Csa6G517000Cucumber (Chinese Long) v2cumedB486
MELO3C007317.2CSPI06G34280Wild cucumber (PI 183967)cpimedB496
MELO3C007317.2Cucsa.045910Cucumber (Gy14) v1cgymedB025
MELO3C007317.2CmaCh07G002700Cucurbita maxima (Rimu)cmamedB897
MELO3C007317.2CmaCh03G004810Cucurbita maxima (Rimu)cmamedB707
MELO3C007317.2Cp4.1LG10g09200Cucurbita pepo (Zucchini)cpemedB086
MELO3C007317.2Cla001353Watermelon (97103) v1medwmB561
MELO3C007317.2ClCG01G022590Watermelon (Charleston Gray)medwcgB510
MELO3C007317.2Cla97C01G022460Watermelon (97103) v2medwmbB507
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007317.2Cucumber (Gy14) v2cgybmedB072
MELO3C007317.2Cucumber (Gy14) v2cgybmedB442
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007317.2Cucumber (Gy14) v1cgymedB199
MELO3C007317.2Cucumber (Gy14) v1cgymedB247
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB158
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB441
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB564
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB667
MELO3C007317.2Cucurbita maxima (Rimu)cmamedB694
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB147
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB428
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB552
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB657
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB700
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB686
MELO3C007317.2Cucurbita moschata (Rifu)cmomedB886
MELO3C007317.2Cucurbita pepo (Zucchini)cpemedB091
MELO3C007317.2Cucurbita pepo (Zucchini)cpemedB540
MELO3C007317.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007317.2Cucurbita pepo (Zucchini)cpemedB773
MELO3C007317.2Cucurbita pepo (Zucchini)cpemedB841
MELO3C007317.2Wild cucumber (PI 183967)cpimedB076
MELO3C007317.2Wild cucumber (PI 183967)cpimedB560
MELO3C007317.2Cucumber (Chinese Long) v2cumedB077
MELO3C007317.2Cucumber (Chinese Long) v2cumedB541
MELO3C007317.2Melon (DHL92) v3.6.1medmedB074
MELO3C007317.2Melon (DHL92) v3.6.1medmedB099
MELO3C007317.2Bottle gourd (USVL1VR-Ls)lsimedB126
MELO3C007317.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007317.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007317.2Watermelon (Charleston Gray)medwcgB514
MELO3C007317.2Watermelon (Charleston Gray)medwcgB519
MELO3C007317.2Watermelon (97103) v1medwmB550
MELO3C007317.2Watermelon (97103) v1medwmB582
MELO3C007317.2Silver-seed gourdcarmedB0035
MELO3C007317.2Silver-seed gourdcarmedB0156
MELO3C007317.2Silver-seed gourdcarmedB0652
MELO3C007317.2Silver-seed gourdcarmedB0875
MELO3C007317.2Silver-seed gourdcarmedB0924
MELO3C007317.2Silver-seed gourdcarmedB0925
MELO3C007317.2Silver-seed gourdcarmedB0937
MELO3C007317.2Cucumber (Chinese Long) v3cucmedB085
MELO3C007317.2Cucumber (Chinese Long) v3cucmedB508
MELO3C007317.2Watermelon (97103) v2medwmbB524
MELO3C007317.2Wax gourdmedwgoB641
MELO3C007317.2Wax gourdmedwgoB674