MELO3C007262 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C007262
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMembrane protein insertase YidC
Locationchr8 : 1796540 .. 1797366 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGCAGTCAATTCTTCTTTCGATGAAGAAAACAATGGAAGAAACACCGTGGTCTCAAAAGCTTCAAGCCCTAACCCACATACTACTCTGCCCCGACACCGCTCCGCCTCTCGCTTCTCAATTCTTCATCGCCACCAAGATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGACGATGAACAGAGGATAAACTACGCCAGAATGAGGCTCAGAAGAAAACGTCTCGGCAGCGATGTTCATCCCTTAATCCCTATTATGATTCCAAATATGTTGCTGTTTACTCTACTTCTGTGGAATCCATTCTCTTCCACTGATTGAGACAAATCTGAAATTTTTGTTGTAAATTGATTGTTTGGGCCCTCTGTTTTTTTAGTAACTTATTAATTGCTGAATAATGTAGAGCGTTTAAGTAAAAGAGAAGTTGGGATATAAAGTTCTGGGTTTCTTTGTTTTCATTAATGCGTGTGGCTGAAAAGTAATTGAGGCTGAGAAATGCAAGAAACAATAACTAGAGAAGACAACAAATCGTGTTTCGAGTTTGCTGTGAATTCGTGTCTGTTTGGAAGCACAAGGAAGGGATAATGGAATTTGAAGAGAGACCCACAAAGCTAAAGAAAGCTTTCAATTTGGGCTGCAATGGCAGCGA

mRNA sequence

GATGCAGTCAATTCTTCTTTCGATGAAGAAAACAATGGAAGAAACACCGTGGTCTCAAAAGCTTCAAGCCCTAACCCACATACTACTCTGCCCCGACACCGCTCCGCCTCTCGCTTCTCAATTCTTCATCGCCACCAAGATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGACGATGAACAGAGGATAAACTACGCCAGAATGAGGCTCAGAAGAAAACGTCTCGGCAGCGATGTTCATCCCTTAATCCCTATTATGATTCCAAATATGTTGCTGTTTACTCTACTTCTGTGGAATCCATTCTCTTCCACTGATTGAGACAAATCTGAAATTTTTGTTGTAAATTGATTGTTTGGGCCCTCTGTTTTTTTAGTAACTTATTAATTGCTGAATAATGTAGAGCGTTTAAGTAAAAGAGAAGTTGGGATATAAAGTTCTGGGTTTCTTTGTTTTCATTAATGCGTGTGGCTGAAAAGTAATTGAGGCTGAGAAATGCAAGAAACAATAACTAGAGAAGACAACAAATCGTGTTTCGAGTTTGCTGTGAATTCGTGTCTGTTTGGAAGCACAAGGAAGGGATAATGGAATTTGAAGAGAGACCCACAAAGCTAAAGAAAGCTTTCAATTTGGGCTGCAATGGCAGCGA

Coding sequence (CDS)

ATGCAGTCAATTCTTCTTTCGATGAAGAAAACAATGGAAGAAACACCGTGGTCTCAAAAGCTTCAAGCCCTAACCCACATACTACTCTGCCCCGACACCGCTCCGCCTCTCGCTTCTCAATTCTTCATCGCCACCAAGATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGACGATGAACAGAGGATAAACTACGCCAGAATGAGGCTCAGAAGAAAACGTCTCGGCAGCGATGTTCATCCCTTAATCCCTATTATGATTCCAAATATGTTGCTGTTTACTCTACTTCTGTGGAATCCATTCTCTTCCACTGATTGA

Protein sequence

MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD*
Homology
[Close]
BLAST of MELO3C007262 vs. TrEMBL
Match: A0A0A0KK88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518100 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 9.7e-90
Identity = 159/165 (96.36%), Postives = 160/165 (96.97%), Query Frame = 1 

Query: 1   MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLC 60
           M SILL MK+TMEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC
Sbjct: 1   MLSILLPMKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC 60

Query: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120
           PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE
Sbjct: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120

Query: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD
Sbjct: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]
BLAST of MELO3C007262 vs. TrEMBL
Match: M5WPK8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016719mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-57
Identity = 102/150 (68.00%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME+T W Q+L ALTH+L+ P T PPL SQFFI+T+IPCYLNWDYPP+LC KS+  P   +
Sbjct: 1   MEDTTWEQRLHALTHVLINPTTTPPLHSQFFISTQIPCYLNWDYPPVLCTKSTFPP---I 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HLQWG SLFLK++SRFG P+TSWRSKCPY LPPPLILAKG+  AQW DEQR    R R+R
Sbjct: 61  HLQWGLSLFLKRVSRFGFPETSWRSKCPYHLPPPLILAKGIEEAQWGDEQRRENFRKRMR 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPF 162
           RKRLG DV+P++PI++PN+LL +LL WNPF
Sbjct: 121 RKRLGGDVNPVLPILVPNLLLLSLLFWNPF 147

[Close]
BLAST of MELO3C007262 vs. TrEMBL
Match: B9H2R0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04800g PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-56
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME+T W Q+LQALTH+L  P T PPL SQFFI+T+IPCYL WDYPP+LC K +   F SL
Sbjct: 1   MEDTTWEQRLQALTHLLTSPTTTPPLYSQFFISTQIPCYLKWDYPPILCTKDTK-TFPSL 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
            L+WGFSLFLK+ SR G P+TSWRSKCPYQ PPPLILAKG+  AQW DEQR  Y R RLR
Sbjct: 61  LLRWGFSLFLKRASRLGCPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRREYVRKRLR 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           RK+L S+V+P IPI++PN+LLF+L+LWNPF   D
Sbjct: 121 RKKLVSNVNPFIPILVPNLLLFSLMLWNPFPDLD 153

[Close]
BLAST of MELO3C007262 vs. TrEMBL
Match: F6HM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00230 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.1e-56
Identity = 105/154 (68.18%), Postives = 122/154 (79.22%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           MEE  W Q+LQALTHIL  P TAPPL SQ FI+T+IPCYLNWDYPP+LC K     F SL
Sbjct: 1   MEEATWEQRLQALTHILTYPTTAPPLHSQLFISTQIPCYLNWDYPPVLCNKPQP-TFPSL 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HL WGFSLFLK++SRFG P+TSWRSKCP+Q PPPLILA+GV  A+W +E+RI Y R RLR
Sbjct: 61  HLSWGFSLFLKRISRFGKPETSWRSKCPFQQPPPLILAEGVEEAKWGEEERIEYVRKRLR 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           R  L + VHP IPI++PN+LLF+LLLWNPF   D
Sbjct: 121 RGHLVNRVHPSIPILVPNLLLFSLLLWNPFPLDD 153

[Close]
BLAST of MELO3C007262 vs. TrEMBL
Match: B9RB98_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1673460 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.0e-56
Identity = 102/154 (66.23%), Postives = 123/154 (79.87%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME++ W QKL ALTHIL  P T P L SQFFI+T+IPCY++WDYPP+ C   +   F SL
Sbjct: 376 MEDSTWEQKLHALTHILTSPTTTPSLYSQFFISTQIPCYIHWDYPPVFCTNGTR-TFPSL 435

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HL+W + LFLK++S+FGLP+TSWRSKCPYQ+PPPLILAKG+  AQW DEQR  Y R RLR
Sbjct: 436 HLRWVYYLFLKRVSKFGLPETSWRSKCPYQVPPPLILAKGLEEAQWGDEQRREYVRKRLR 495

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           RKRLGS++HP IPI+IPN+ LF+LLLWNPF   D
Sbjct: 496 RKRLGSNIHPSIPILIPNLFLFSLLLWNPFPYLD 528

[Close]
BLAST of MELO3C007262 vs. TAIR10
Match: AT2G33855.1 (AT2G33855.1 unknown protein)

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-43
Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           MEET W Q++QA+THIL  P T P L SQFFI   IP Y++WDYPP+  P          
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSPT--------- 60

Query: 72  HL-QWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRL 131
           HL QW  S F K++SRFGLP TSWRS  PY  PP  ++A GV   +W  E+R  YAR RL
Sbjct: 61  HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120

Query: 132 RRKRLGSDVHPLIPIMIPNMLLFTLLLWNP 161
           RRKRL ++V+P IP+++PN+LLFTLLLW+P
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDP 141

[Close]
BLAST of MELO3C007262 vs. NCBI nr
Match: gi|659078606|ref|XP_008439813.1| (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-93
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLC 60
           MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLC
Sbjct: 1   MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLC 60

Query: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120
           PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE
Sbjct: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120

Query: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD
Sbjct: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]
BLAST of MELO3C007262 vs. NCBI nr
Match: gi|778720941|ref|XP_004134687.2| (PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 1.4e-89
Identity = 159/165 (96.36%), Postives = 160/165 (96.97%), Query Frame = 1 

Query: 1   MQSILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLC 60
           M SILL MK+TMEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC
Sbjct: 1   MLSILLPMKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC 60

Query: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120
           PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE
Sbjct: 61  PKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDE 120

Query: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 166
           QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD
Sbjct: 121 QRINYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]
BLAST of MELO3C007262 vs. NCBI nr
Match: gi|595912934|ref|XP_007214508.1| (hypothetical protein PRUPE_ppa016719mg [Prunus persica])

HSP 1 Score: 230.3 bits (586), Expect = 2.4e-57
Identity = 102/150 (68.00%), Postives = 123/150 (82.00%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME+T W Q+L ALTH+L+ P T PPL SQFFI+T+IPCYLNWDYPP+LC KS+  P   +
Sbjct: 1   MEDTTWEQRLHALTHVLINPTTTPPLHSQFFISTQIPCYLNWDYPPVLCTKSTFPP---I 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HLQWG SLFLK++SRFG P+TSWRSKCPY LPPPLILAKG+  AQW DEQR    R R+R
Sbjct: 61  HLQWGLSLFLKRVSRFGFPETSWRSKCPYHLPPPLILAKGIEEAQWGDEQRRENFRKRMR 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPF 162
           RKRLG DV+P++PI++PN+LL +LL WNPF
Sbjct: 121 RKRLGGDVNPVLPILVPNLLLLSLLFWNPF 147

[Close]
BLAST of MELO3C007262 vs. NCBI nr
Match: gi|697119046|ref|XP_009613469.1| (PREDICTED: uncharacterized protein LOC104106596 [Nicotiana tomentosiformis])

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-56
Identity = 100/150 (66.67%), Postives = 122/150 (81.33%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME+T W Q++QALTHI++ P T P L SQ FI++++PCYLNWDYPP+LC K S   F S+
Sbjct: 1   MEDTRWDQRIQALTHIIINPTTKPSLDSQIFISSQVPCYLNWDYPPILCTKYSTNTFPSV 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HL+W FSLFLK++SR G P+TSWRSKCPYQ PPPLILAKG+  AQW DEQR  Y R R +
Sbjct: 61  HLKWAFSLFLKRVSRLGAPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRRLYVRKRFK 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPF 162
           R+ LGSDVHPLIP ++PN+LLF+LLLWNPF
Sbjct: 121 RRHLGSDVHPLIPFIVPNLLLFSLLLWNPF 150

[Close]
BLAST of MELO3C007262 vs. NCBI nr
Match: gi|694323593|ref|XP_009352858.1| (PREDICTED: uncharacterized protein LOC103944167 [Pyrus x bretschneideri])

HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56
Identity = 106/149 (71.14%), Postives = 123/149 (82.55%), Query Frame = 1 

Query: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71
           ME+T W QKL ALTHIL+ P TAP   SQ FIAT+IPCYLNWDYPP+LC KS+  P   +
Sbjct: 1   MEDTTWEQKLNALTHILINPTTAPSPHSQLFIATQIPCYLNWDYPPILCTKSTFPP---I 60

Query: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131
           HLQ+  SLFLK++SR GLP+TSWRSKCPYQLPPPL+LAKGV  AQW +EQRI   R R+R
Sbjct: 61  HLQFAISLFLKRVSRLGLPQTSWRSKCPYQLPPPLVLAKGVEEAQWGEEQRIERFRKRMR 120

Query: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNP 161
           RKRLGSDV+PL+PI++PNMLLF LLLWNP
Sbjct: 121 RKRLGSDVNPLLPILVPNMLLFFLLLWNP 146

The following BLAST results are available for this feature:
BLAST of MELO3C007262 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK88_CUCSA9.7e-9096.36Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518100 PE=4 SV=1[more]
M5WPK8_PRUPE1.7e-5768.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016719mg PE=4 SV=1[more]
B9H2R0_POPTR2.4e-5667.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04800g PE=4 SV=1[more]
F6HM33_VITVI4.1e-5668.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00230 PE=4 SV=... [more]
B9RB98_RICCO7.0e-5666.23Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1673460 PE=4 SV=1[more]
BLAST of MELO3C007262 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33855.13.6e-4355.33 unknown protein[more]
BLAST of MELO3C007262 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078606|ref|XP_008439813.1|2.1e-93100.00PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo][more]
gi|778720941|ref|XP_004134687.2|1.4e-8996.36PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus][more]
gi|595912934|ref|XP_007214508.1|2.4e-5768.00hypothetical protein PRUPE_ppa016719mg [Prunus persica][more]
gi|697119046|ref|XP_009613469.1|1.6e-5666.67PREDICTED: uncharacterized protein LOC104106596 [Nicotiana tomentosiformis][more]
gi|694323593|ref|XP_009352858.1|2.0e-5671.14PREDICTED: uncharacterized protein LOC103944167 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007262T1MELO3C007262T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38364FAMILY NOT NAMEDcoord: 1..161
score: 3.3
NoneNo IPR availablePANTHERPTHR38364:SF1SUBFAMILY NOT NAMEDcoord: 1..161
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007262Csa6G518100Cucumber (Chinese Long) v2cumeB507
MELO3C007262Cla009641Watermelon (97103) v1mewmB572
MELO3C007262ClCG01G023240Watermelon (Charleston Gray)mewcgB515
MELO3C007262Bhi03G000293Wax gourdmewgoB635
MELO3C007262CSPI06G34890Wild cucumber (PI 183967)cpimeB512
MELO3C007262Cucsa.046460Cucumber (Gy14) v1cgymeB027
MELO3C007262CmaCh07G002200Cucurbita maxima (Rimu)cmameB798
MELO3C007262CmaCh03G012860Cucurbita maxima (Rimu)cmameB618
MELO3C007262CmoCh03G012840Cucurbita moschata (Rifu)cmomeB606
MELO3C007262Cp4.1LG10g05140Cucurbita pepo (Zucchini)cpemeB061
MELO3C007262CsGy6G034420Cucumber (Gy14) v2cgybmeB445
MELO3C007262Carg15310Silver-seed gourdcarmeB0554
MELO3C007262Carg07763Silver-seed gourdcarmeB0642
MELO3C007262CsaV3_6G050400Cucumber (Chinese Long) v3cucmeB520
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007262Watermelon (97103) v2mewmbB515
MELO3C007262Watermelon (97103) v2mewmbB530
MELO3C007262Wax gourdmewgoB665
MELO3C007262Melon (DHL92) v3.5.1memeB075
MELO3C007262Cucumber (Gy14) v1cgymeB201
MELO3C007262Cucurbita maxima (Rimu)cmameB211
MELO3C007262Cucurbita maxima (Rimu)cmameB381
MELO3C007262Cucurbita moschata (Rifu)cmomeB195
MELO3C007262Cucurbita moschata (Rifu)cmomeB373
MELO3C007262Cucurbita moschata (Rifu)cmomeB782
MELO3C007262Wild cucumber (PI 183967)cpimeB086
MELO3C007262Cucumber (Chinese Long) v2cumeB083
MELO3C007262Watermelon (Charleston Gray)mewcgB523
MELO3C007262Watermelon (97103) v1mewmB562
MELO3C007262Cucurbita pepo (Zucchini)cpemeB457
MELO3C007262Cucurbita pepo (Zucchini)cpemeB485
MELO3C007262Bottle gourd (USVL1VR-Ls)lsimeB149
MELO3C007262Bottle gourd (USVL1VR-Ls)lsimeB228
MELO3C007262Cucumber (Gy14) v2cgybmeB076
MELO3C007262Silver-seed gourdcarmeB0153
MELO3C007262Silver-seed gourdcarmeB0931
MELO3C007262Cucumber (Chinese Long) v3cucmeB092