CmaCh07G002200 (gene) Cucurbita maxima (Rimu)

NameCmaCh07G002200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_4
LocationCma_Chr07 : 1028916 .. 1029380 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCATTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGCAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAACATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

mRNA sequence

ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCATTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGCAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAACATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

Coding sequence (CDS)

ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCATTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGCAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAACATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

Protein sequence

MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLSRKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD
BLAST of CmaCh07G002200 vs. TrEMBL
Match: A0A0A0KK88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518100 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.6e-78
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRL 
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

BLAST of CmaCh07G002200 vs. TrEMBL
Match: A0A0D2S2L5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G166900 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.3e-58
Identity = 107/154 (69.48%), Postives = 125/154 (81.17%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEES W QKLQ LTHIL  PTT+PPL SQ F++T+IPC+LNWD+PP+LC KP+   F SL
Sbjct: 1   MEESTWEQKLQALTHILTSPTTSPPLHSQLFISTQIPCFLNWDFPPILCNKPNSHTFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HL+WG SLFLKR+SR G+P+TSWRSKCP+  PPPLILAKGVD AQW D Q+R YVR RL 
Sbjct: 61  HLKWGISLFLKRVSRLGVPETSWRSKCPYYQPPPLILAKGVDEAQWVDAQKREYVRKRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RKRL S VHPLIPI+IP++LLFSLL +NP    D
Sbjct: 121 RKRLESHVHPLIPILIPDLLLFSLLWFNPFRLND 154

BLAST of CmaCh07G002200 vs. TrEMBL
Match: F6HM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00230 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 107/154 (69.48%), Postives = 124/154 (80.52%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+ W Q+LQ LTHIL  PTTAPPL SQ F++T+IPCYLNWDYPP+LC KP    F SL
Sbjct: 1   MEEATWEQRLQALTHILTYPTTAPPLHSQLFISTQIPCYLNWDYPPVLCNKPQP-TFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HL WGFSLFLKR+SRFG P+TSWRSKCPFQ PPPLILA+GV+ A+WG+E+R  YVR RL 
Sbjct: 61  HLSWGFSLFLKRISRFGKPETSWRSKCPFQQPPPLILAEGVEEAKWGEEERIEYVRKRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           R  L + VHP IPI++PN+LLFSLLLWNP    D
Sbjct: 121 RGHLVNRVHPSIPILVPNLLLFSLLLWNPFPLDD 153

BLAST of CmaCh07G002200 vs. TrEMBL
Match: B9H2R0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04800g PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-56
Identity = 103/154 (66.88%), Postives = 125/154 (81.17%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           ME++ W Q+LQ LTH+L  PTT PPL SQ+F++T+IPCYL WDYPP+LC K +   F SL
Sbjct: 1   MEDTTWEQRLQALTHLLTSPTTTPPLYSQFFISTQIPCYLKWDYPPILCTKDTK-TFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
            L+WGFSLFLKR SR G P+TSWRSKCP+Q PPPLILAKG++ AQWGDEQRR YVR RL 
Sbjct: 61  LLRWGFSLFLKRASRLGCPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRREYVRKRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RK+L S+V+P IPI++PN+LLFSL+LWNP    D
Sbjct: 121 RKKLVSNVNPFIPILVPNLLLFSLMLWNPFPDLD 153

BLAST of CmaCh07G002200 vs. TrEMBL
Match: A0A061GM82_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_029809 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-56
Identity = 101/154 (65.58%), Postives = 125/154 (81.17%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           M+++ W QKLQ  THIL  PTT+PPL SQ+F++++IPCYLNWDYPP+LC KP+   F SL
Sbjct: 1   MDDTTWEQKLQASTHILTSPTTSPPLHSQFFISSQIPCYLNWDYPPVLCNKPNTDRFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HL+WGFS+FLKR+S  GLP+TSWRSKCP+ HPPPLILAKGV+ AQW D Q+R +VR RL 
Sbjct: 61  HLKWGFSIFLKRVSTLGLPETSWRSKCPYHHPPPLILAKGVEEAQWDDGQKRVFVRKRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RK  GSD+ P IPI+IP++LLFSLLL+NP    D
Sbjct: 121 RKLRGSDIQPWIPILIPDLLLFSLLLFNPFPLND 154

BLAST of CmaCh07G002200 vs. TAIR10
Match: AT2G33855.1 (AT2G33855.1 unknown protein)

HSP 1 Score: 170.6 bits (431), Expect = 7.4e-43
Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+ W Q++Q +THIL  PTT P L SQ+F+   IP Y++WDYPP+  P          
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSPT--------- 60

Query: 61  HL-QWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRL 120
           HL QW  S F KR+SRFGLP TSWRS  P+  PP  ++A GV+  +WG E+RR Y R RL
Sbjct: 61  HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120

Query: 121 SRKRLGSDVHPLIPIIIPNMLLFSLLLWNPL 151
            RKRL ++V+P IP+++PN+LLF+LLLW+PL
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDPL 142

BLAST of CmaCh07G002200 vs. NCBI nr
Match: gi|778720941|ref|XP_004134687.2| (PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 5.1e-78
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRL 
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

BLAST of CmaCh07G002200 vs. NCBI nr
Match: gi|659078606|ref|XP_008439813.1| (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PW QKLQ LTHILLCP TAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRL 
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

BLAST of CmaCh07G002200 vs. NCBI nr
Match: gi|697119046|ref|XP_009613469.1| (PREDICTED: uncharacterized protein LOC104106596 [Nicotiana tomentosiformis])

HSP 1 Score: 233.0 bits (593), Expect = 3.4e-58
Identity = 102/149 (68.46%), Postives = 124/149 (83.22%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           ME++ W Q++Q LTHI++ PTT P L SQ F+++++PCYLNWDYPP+LC K S   F S+
Sbjct: 1   MEDTRWDQRIQALTHIIINPTTKPSLDSQIFISSQVPCYLNWDYPPILCTKYSTNTFPSV 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HL+W FSLFLKR+SR G P+TSWRSKCP+Q PPPLILAKG++ AQWGDEQRR YVR R  
Sbjct: 61  HLKWAFSLFLKRVSRLGAPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRRLYVRKRFK 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNP 150
           R+ LGSDVHPLIP I+PN+LLFSLLLWNP
Sbjct: 121 RRHLGSDVHPLIPFIVPNLLLFSLLLWNP 149

BLAST of CmaCh07G002200 vs. NCBI nr
Match: gi|823224791|ref|XP_012445174.1| (PREDICTED: uncharacterized protein LOC105769234 [Gossypium raimondii])

HSP 1 Score: 231.9 bits (590), Expect = 7.7e-58
Identity = 107/154 (69.48%), Postives = 125/154 (81.17%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEES W QKLQ LTHIL  PTT+PPL SQ F++T+IPC+LNWD+PP+LC KP+   F SL
Sbjct: 1   MEESTWEQKLQALTHILTSPTTSPPLHSQLFISTQIPCFLNWDFPPILCNKPNSHTFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLS 120
           HL+WG SLFLKR+SR G+P+TSWRSKCP+  PPPLILAKGVD AQW D Q+R YVR RL 
Sbjct: 61  HLKWGISLFLKRVSRLGVPETSWRSKCPYYQPPPLILAKGVDEAQWVDAQKREYVRKRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 155
           RKRL S VHPLIPI+IP++LLFSLL +NP    D
Sbjct: 121 RKRLESHVHPLIPILIPDLLLFSLLWFNPFRLND 154

BLAST of CmaCh07G002200 vs. NCBI nr
Match: gi|720013876|ref|XP_010260324.1| (PREDICTED: uncharacterized protein LOC104599469 [Nelumbo nucifera])

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 104/151 (68.87%), Postives = 124/151 (82.12%), Query Frame = 1

Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+ W Q++Q LTH+L  PT  P L SQ+F++T++PCYLNWDYPP+LC K    PF SL
Sbjct: 1   MEEARWEQRIQALTHVLTSPTINPSLHSQFFISTQVPCYLNWDYPPILCNKDQRNPFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVD--PAQWGDEQRRTYVRMR 120
           HL+WG SLF KR+SRFG P+TSWRSKCPFQ P PLILAKGV+  P+ WG+EQRR Y R R
Sbjct: 61  HLKWGLSLFWKRVSRFGFPETSWRSKCPFQQPQPLILAKGVEVSPSMWGEEQRREYFRKR 120

Query: 121 LSRKRLGSDVHPLIPIIIPNMLLFSLLLWNP 150
           L RKRLGS++HPLIPI+IPN+LLFSLLLWNP
Sbjct: 121 LRRKRLGSNIHPLIPIVIPNVLLFSLLLWNP 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK88_CUCSA3.6e-7888.96Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518100 PE=4 SV=1[more]
A0A0D2S2L5_GOSRA5.3e-5869.48Uncharacterized protein OS=Gossypium raimondii GN=B456_009G166900 PE=4 SV=1[more]
F6HM33_VITVI2.0e-5769.48Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00230 PE=4 SV=... [more]
B9H2R0_POPTR1.0e-5666.88Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04800g PE=4 SV=1[more]
A0A061GM82_THECC1.7e-5665.58Uncharacterized protein OS=Theobroma cacao GN=TCM_029809 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G33855.17.4e-4352.98 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778720941|ref|XP_004134687.2|5.1e-7888.96PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus][more]
gi|659078606|ref|XP_008439813.1|2.1e-7687.66PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo][more]
gi|697119046|ref|XP_009613469.1|3.4e-5868.46PREDICTED: uncharacterized protein LOC104106596 [Nicotiana tomentosiformis][more]
gi|823224791|ref|XP_012445174.1|7.7e-5869.48PREDICTED: uncharacterized protein LOC105769234 [Gossypium raimondii][more]
gi|720013876|ref|XP_010260324.1|1.3e-5768.87PREDICTED: uncharacterized protein LOC104599469 [Nelumbo nucifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G002200.1CmaCh07G002200.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38364FAMILY NOT NAMEDcoord: 1..150
score: 1.6

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh07G002200CmaCh03G012860Cucurbita maxima (Rimu)cmacmaB528