Carg15310 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSLHLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
BLAST of Carg15310 vs. NCBI nr
Match: XP_022978775.1 (uncharacterized protein LOC111478635 [Cucurbita maxima]) HSP 1 Score: 320.5 bits (820), Expect = 3.2e-84 Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg15310 vs. NCBI nr
Match: XP_022926954.1 (uncharacterized protein LOC111433914 [Cucurbita moschata]) HSP 1 Score: 283.1 bits (723), Expect = 5.6e-73 Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Carg15310 vs. NCBI nr
Match: XP_004134687.2 (PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus] >KGN49254.1 hypothetical protein Csa_6G518100 [Cucumis sativus]) HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72 Identity = 131/153 (85.62%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Carg15310 vs. NCBI nr
Match: XP_008439813.1 (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo]) HSP 1 Score: 278.5 bits (711), Expect = 1.4e-71 Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of Carg15310 vs. NCBI nr
Match: XP_023517994.1 (uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.3 bits (708), Expect = 3.1e-71 Identity = 127/153 (83.01%), Postives = 140/153 (91.50%), Query Frame = 0
BLAST of Carg15310 vs. TAIR10
Match: AT2G33855.1 (unknown protein) HSP 1 Score: 164.5 bits (415), Expect = 5.3e-41 Identity = 80/151 (52.98%), Postives = 103/151 (68.21%), Query Frame = 0
BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A0A0KK88|A0A0A0KK88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.1e-72 Identity = 131/153 (85.62%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A1S3B097|A0A1S3B097_CUCME (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 9.2e-72 Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A1Q3AX86|A0A1Q3AX86_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03859 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57 Identity = 106/149 (71.14%), Postives = 124/149 (83.22%), Query Frame = 0
BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A2C9U5X7|A0A2C9U5X7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G049100 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A2N9G7F2|A0A2N9G7F2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23242 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.7e-57 Identity = 106/149 (71.14%), Postives = 123/149 (82.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |