Carg15310 (gene) Silver-seed gourd

NameCarg15310
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTransmembrane protein
LocationCucurbita_argyrosperma_scaffold_085 : 278460 .. 278924 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA

mRNA sequence

ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA

Coding sequence (CDS)

ATGGAAGACGCACCCTGGACTGAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCGTGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCAAGGCGTCGACGCCGCTCAGTGGGACGATGAACAGAGGAGAAAGTACGTGAGAATTAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTTAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTGTCTTCCACTCATTAA

Protein sequence

MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSLHLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
BLAST of Carg15310 vs. NCBI nr
Match: XP_022978775.1 (uncharacterized protein LOC111478635 [Cucurbita maxima])

HSP 1 Score: 320.5 bits (820), Expect = 3.2e-84
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           MEDAPWT+KLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL
Sbjct: 9   MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLKRLSRLGLP+TSWRSKCPYQLPPPLLLA+GVD AQWDDEQRR YVR+RLR
Sbjct: 69  HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 155
           RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
Sbjct: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 162

BLAST of Carg15310 vs. NCBI nr
Match: XP_022926954.1 (uncharacterized protein LOC111433914 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 5.6e-73
Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME++PW +KL+ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLC KPSIFPFPSL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLKRLSR  LP TSWRSKCP+Q PPPL+LA+GVD AQW DEQRR YVR+RLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPI+IPNMLLF LLLW PLSST
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSST 153

BLAST of Carg15310 vs. NCBI nr
Match: XP_004134687.2 (PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus] >KGN49254.1 hypothetical protein Csa_6G518100 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 131/153 (85.62%), Postives = 139/153 (90.85%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME+APW +KL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC K SIFPF SL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV  AQWDDEQR  Y R+RLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164

BLAST of Carg15310 vs. NCBI nr
Match: XP_008439813.1 (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 1.4e-71
Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME+ PW++KL+ALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC K SIFPF SL
Sbjct: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV  AQWDDEQR  Y R+RLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164

BLAST of Carg15310 vs. NCBI nr
Match: XP_023517994.1 (uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 3.1e-71
Identity = 127/153 (83.01%), Postives = 140/153 (91.50%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME++PW +KL+ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLC KPSIFPF SL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLKRLSR GLP TSWRSKCP+Q PPP +LA+GV+ AQW DEQRR YVR+RLR
Sbjct: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPSILAKGVNPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPI+IPNMLLF LLLW PLSST
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSST 153

BLAST of Carg15310 vs. TAIR10
Match: AT2G33855.1 (unknown protein)

HSP 1 Score: 164.5 bits (415), Expect = 5.3e-41
Identity = 80/151 (52.98%), Postives = 103/151 (68.21%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME+  W ++++A+THIL  PTT P L SQFFI   IP Y++WDYPP+         +   
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPV---------YSPT 60

Query: 61  HL-QWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRL 120
           HL QW  S F KR+SR GLP TSWRS  PY  PP  ++A GV+  +W  E+RR+Y R RL
Sbjct: 61  HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120

Query: 121 RRKRLGSDVNPLIPIMIPNMLLFCLLLWKPL 151
           RRKRL ++VNP IP+++PN+LLF LLLW PL
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDPL 142

BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A0A0KK88|A0A0A0KK88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-72
Identity = 131/153 (85.62%), Postives = 139/153 (90.85%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME+APW +KL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC K SIFPF SL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV  AQWDDEQR  Y R+RLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164

BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A1S3B097|A0A1S3B097_CUCME (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 9.2e-72
Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           ME+ PW++KL+ALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC K SIFPF SL
Sbjct: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV  AQWDDEQR  Y R+RLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 154
           RKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164

BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A1Q3AX86|A0A1Q3AX86_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03859 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 106/149 (71.14%), Postives = 124/149 (83.22%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           MED  W +KL+ALTHIL  PTT PPL SQ FI+T+IPCYLNWDYPP+LC+K     F SL
Sbjct: 286 MEDTTWEQKLQALTHILTSPTTEPPLYSQLFISTQIPCYLNWDYPPVLCTKAINDTFLSL 345

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           H++WGFSLF+KR+ R GLPVTSWRSKCPYQ PPPL+LA+G++ AQW D QRR+YVR RLR
Sbjct: 346 HMRWGFSLFIKRVFRFGLPVTSWRSKCPYQQPPPLILAKGLEEAQWGDVQRREYVRRRLR 405

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKP 150
           RKRL SDV+PLIPIM+PN+LL  LLLW P
Sbjct: 406 RKRLVSDVHPLIPIMVPNILLLSLLLWNP 434

BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A2C9U5X7|A0A2C9U5X7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G049100 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           MED  W ++L+ALTHIL+ PTT PPL SQFFI+T+IPCYLNWDYPP+LC+K     FPSL
Sbjct: 1   MEDTKWEQRLQALTHILISPTTTPPLYSQFFISTQIPCYLNWDYPPILCTKDHRI-FPSL 60

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HL+W FSLFLKR+SRLGLP TSWRSKCPYQ PPPL+ A+GV+ AQW DEQ+R+Y+R RLR
Sbjct: 61  HLRWAFSLFLKRVSRLGLPETSWRSKCPYQQPPPLIPAKGVEEAQWGDEQKREYIRKRLR 120

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKP 150
           RKRLG++++P IPI++PN+ LF L+ W P
Sbjct: 121 RKRLGNNIHPSIPILVPNLFLFSLMFWNP 148

BLAST of Carg15310 vs. TrEMBL
Match: tr|A0A2N9G7F2|A0A2N9G7F2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23242 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.7e-57
Identity = 106/149 (71.14%), Postives = 123/149 (82.55%), Query Frame = 0

Query: 1   MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
           MED  W ++L+ALTHIL  PT  PPL SQFFI+  IPCYLNWDYPP+LC K +   FPSL
Sbjct: 1   MEDTTWEQRLQALTHILTSPTITPPLHSQFFISNLIPCYLNWDYPPILCKKFN-STFPSL 60

Query: 61  HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
           HL WGFSLFLKR+SR G P TSWRSKCP+Q PPPL+LA+GV+ AQW +EQRR+YVR RL 
Sbjct: 61  HLSWGFSLFLKRVSRFGRPETSWRSKCPFQQPPPLILAKGVEEAQWGEEQRREYVRKRLS 120

Query: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKP 150
           RKRLGSDV+PLIPI++PN+LLF LLLW P
Sbjct: 121 RKRLGSDVHPLIPILVPNLLLFSLLLWDP 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022978775.13.2e-8496.10uncharacterized protein LOC111478635 [Cucurbita maxima][more]
XP_022926954.15.6e-7384.31uncharacterized protein LOC111433914 [Cucurbita moschata][more]
XP_004134687.21.6e-7285.62PREDICTED: uncharacterized protein LOC101221431 [Cucumis sativus] >KGN49254.1 hy... [more]
XP_008439813.11.4e-7184.31PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo][more]
XP_023517994.13.1e-7183.01uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT2G33855.15.3e-4152.98unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KK88|A0A0A0KK88_CUCSA1.1e-7285.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1[more]
tr|A0A1S3B097|A0A1S3B097_CUCME9.2e-7284.31uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=... [more]
tr|A0A1Q3AX86|A0A1Q3AX86_CEPFO1.7e-5771.14Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
tr|A0A2C9U5X7|A0A2C9U5X7_MANES1.7e-5768.46Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G049100 PE=4 SV=... [more]
tr|A0A2N9G7F2|A0A2N9G7F2_FAGSY3.7e-5771.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23242 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15310-RACarg15310-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38364FAMILY NOT NAMEDcoord: 1..152

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg15310Carg07763Silver-seed gourdcarcarB507