MELO3C007198.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007198.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr08 : 1423401 .. 1424019 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCAATGCATATCCTCTCTTCATTTTCTTAATTTCTTTCCAAAATTGCATCTCACATTTTAACATATAATTATTAAATAAAAACTGTGGATCACATCACATCCAGACAAACAATTACATGGAAAGAAAAGCTTTTTTTAAGCTAAACCACACATCGAGATATATAACTGTGAATAATCCGTATCTGTACAAGTAGTAGTATATATGTATTAAAAAATAATAATAATGAGAAAAAATGGAAAACTTGGGTGCAATCCATCTGTATATCTTTGTGCACTTGGACTGTGGAGCCCTAATGGCCGACGCCGGGGCTTGGAACCGACTGGACAAGGTGGCGAGCAGTGAGGTTGTGGTGGAGAAGCATGGAATGAACTTTCTTGCTGGGAGAGGAAGTGGGGATGGTGCCCTTGGGAAGGGCGGTGAGAAAGAGGGTGTTCGGAGACGCCATGGTAGGTACGAGTCTGGCGGCGCGAGAAGTGGGAGCGGAGGATGCGAATAGAAGAGCCAAAATGAGAGAGCAAGTGATGAATGTGAAGCGAGGCATGGAGATTCAAAATAATATTAAGAGATTTTAGAAGTTAAAATTGTGGTGAATTAATTTTGGTTTAGTTTGAAGTAT

mRNA sequence

TATCAATGCATATCCTCTCTTCATTTTCTTAATTTCTTTCCAAAATTGCATCTCACATTTTAACATATAATTATTAAATAAAAACTGTGGATCACATCACATCCAGACAAACAATTACATGGAAAGAAAAGCTTTTTTTAAGCTAAACCACACATCGAGATATATAACTGTGAATAATCCGTATCTGTACAAGTAGTAGTATATATGTATTAAAAAATAATAATAATGAGAAAAAATGGAAAACTTGGGTGCAATCCATCTGTATATCTTTGTGCACTTGGACTGTGGAGCCCTAATGGCCGACGCCGGGGCTTGGAACCGACTGGACAAGGTGGCGAGCAGTGAGGTTGTGGTGGAGAAGCATGGAATGAACTTTCTTGCTGGGAGAGGAAGTGGGGATGGTGCCCTTGGGAAGGGCGGTGAGAAAGAGGGTGTTCGGAGACGCCATGGTAGGTACGAGTCTGGCGGCGCGAGAAGTGGGAGCGGAGGATGCGAATAGAAGAGCCAAAATGAGAGAGCAAGTGATGAATGTGAAGCGAGGCATGGAGATTCAAAATAATATTAAGAGATTTTAGAAGTTAAAATTGTGGTGAATTAATTTTGGTTTAGTTTGAAGTAT

Coding sequence (CDS)

ATGGAAAACTTGGGTGCAATCCATCTGTATATCTTTGTGCACTTGGACTGTGGAGCCCTAATGGCCGACGCCGGGGCTTGGAACCGACTGGACAAGGTGGCGAGCAGTGAGGTTGTGGTGGAGAAGCATGGAATGAACTTTCTTGCTGGGAGAGGAAGTGGGGATGGTGCCCTTGGGAAGGGCGGTGAGAAAGAGGGTGTTCGGAGACGCCATGGTAGGTACGAGTCTGGCGGCGCGAGAAGTGGGAGCGGAGGATGCGAATAG

Protein sequence

MENLGAIHLYIFVHLDCGALMADAGAWNRLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHGRYESGGARSGSGGCE
Homology
[Close]
BLAST of MELO3C007198.2 vs. NCBI nr
Match: KGN49323.1 (hypothetical protein Csa_6G519740 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 7.7e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 21 MADAGAWNRLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 73
          MADAGAWN LDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG
Sbjct: 1  MADAGAWNGLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 52

[Close]
BLAST of MELO3C007198.2 vs. TrEMBL
Match: tr|A0A0A0KIB1|A0A0A0KIB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.1e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 21 MADAGAWNRLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 73
          MADAGAWN LDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG
Sbjct: 1  MADAGAWNGLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 52

The following BLAST results are available for this feature:
BLAST of MELO3C007198.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49323.17.7e-1998.08hypothetical protein Csa_6G519740 [Cucumis sativus][more]
BLAST of MELO3C007198.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C007198.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007198.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KIB1|A0A0A0KIB1_CUCSA5.1e-1998.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007198.2.1MELO3C007198.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..76

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007198.2Csa6G519740Cucumber (Chinese Long) v2cumedB486
MELO3C007198.2CSPI06G35550Wild cucumber (PI 183967)cpimedB496
MELO3C007198.2Cp4.1LG19g06460Cucurbita pepo (Zucchini)cpemedB540
MELO3C007198.2CsGy6G035040Cucumber (Gy14) v2cgybmedB442
MELO3C007198.2Bhi07G000176Wax gourdmedwgoB676
MELO3C007198.2CsaV3_6G051050Cucumber (Chinese Long) v3cucmedB508
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007198.2Watermelon (97103) v1medwmB554
MELO3C007198.2Cucumber (Gy14) v2cgybmedB070
MELO3C007198.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007198.2Cucumber (Gy14) v1cgymedB025
MELO3C007198.2Cucumber (Gy14) v1cgymedB376
MELO3C007198.2Cucurbita maxima (Rimu)cmamedB440
MELO3C007198.2Cucurbita maxima (Rimu)cmamedB563
MELO3C007198.2Cucurbita maxima (Rimu)cmamedB704
MELO3C007198.2Cucurbita maxima (Rimu)cmamedB897
MELO3C007198.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007198.2Cucurbita moschata (Rifu)cmomedB429
MELO3C007198.2Cucurbita moschata (Rifu)cmomedB551
MELO3C007198.2Cucurbita moschata (Rifu)cmomedB695
MELO3C007198.2Cucurbita moschata (Rifu)cmomedB886
MELO3C007198.2Cucurbita pepo (Zucchini)cpemedB052
MELO3C007198.2Cucurbita pepo (Zucchini)cpemedB081
MELO3C007198.2Cucurbita pepo (Zucchini)cpemedB287
MELO3C007198.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007198.2Wild cucumber (PI 183967)cpimedB074
MELO3C007198.2Cucumber (Chinese Long) v2cumedB075
MELO3C007198.2Melon (DHL92) v3.6.1medmedB074
MELO3C007198.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007198.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007198.2Watermelon (Charleston Gray)medwcgB510
MELO3C007198.2Watermelon (Charleston Gray)medwcgB518
MELO3C007198.2Watermelon (Charleston Gray)medwcgB541
MELO3C007198.2Watermelon (97103) v1medwmB549
MELO3C007198.2Watermelon (97103) v1medwmB561
MELO3C007198.2Silver-seed gourdcarmedB0157
MELO3C007198.2Silver-seed gourdcarmedB0560
MELO3C007198.2Silver-seed gourdcarmedB0809
MELO3C007198.2Silver-seed gourdcarmedB0943
MELO3C007198.2Cucumber (Chinese Long) v3cucmedB083
MELO3C007198.2Watermelon (97103) v2medwmbB507
MELO3C007198.2Watermelon (97103) v2medwmbB523
MELO3C007198.2Wax gourdmedwgoB628
MELO3C007198.2Wax gourdmedwgoB671