Bhi07G000176 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000176
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr7 : 9905212 .. 9905412 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA

mRNA sequence

ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA

Coding sequence (CDS)

ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA

Protein sequence

MFVGGVLMADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHGWEESGGA

Homology

[Close]

BLAST of Bhi07G000176 vs. TrEMBL
Match: tr|A0A0A0KIB1|A0A0A0KIB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-17
Identity = 48/52 (92.31%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 8  MADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHG 60
          MADAGAWNGL KVA SEVVVEK  MNFLAGRGSGDGALGKGGEKEGVRRRHG
Sbjct: 1  MADAGAWNGLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 52

[Close]

BLAST of Bhi07G000176 vs. NCBI nr
Match: KGN49323.1 (hypothetical protein Csa_6G519740 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16
Identity = 48/52 (92.31%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 8  MADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHG 60
          MADAGAWNGL KVA SEVVVEK  MNFLAGRGSGDGALGKGGEKEGVRRRHG
Sbjct: 1  MADAGAWNGLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 52

The following BLAST results are available for this feature:

BLAST of Bhi07G000176 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi07G000176 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi07G000176 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIB1\|A0A0A0KIB1_CUCSA	8.1e-17	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1	[more]

BLAST of Bhi07G000176 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49323.1	1.2e-16	92.31	hypothetical protein Csa_6G519740 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000176	Bhi07M000176	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..66

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi07G000176	Csa6G519740	Cucumber (Chinese Long) v2	cuwgoB642
Bhi07G000176	MELO3C007198	Melon (DHL92) v3.5.1	mewgoB668
Bhi07G000176	CSPI06G35550	Wild cucumber (PI 183967)	cpiwgoB649
Bhi07G000176	Cp4.1LG19g06460	Cucurbita pepo (Zucchini)	cpewgoB0621
Bhi07G000176	CsGy6G035040	Cucumber (Gy14) v2	cgybwgoB611
Bhi07G000176	MELO3C007198.2	Melon (DHL92) v3.6.1	medwgoB676
Bhi07G000176	CsaV3_6G051050	Cucumber (Chinese Long) v3	cucwgoB662

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000176	Cucumber (Gy14) v1	cgywgoB030
Bhi07G000176	Cucurbita maxima (Rimu)	cmawgoB0810
Bhi07G000176	Cucurbita maxima (Rimu)	cmawgoB1083
Bhi07G000176	Cucurbita moschata (Rifu)	cmowgoB0806
Bhi07G000176	Cucurbita moschata (Rifu)	cmowgoB1077
Bhi07G000176	Cucurbita pepo (Zucchini)	cpewgoB0110
Bhi07G000176	Bottle gourd (USVL1VR-Ls)	lsiwgoB196
Bhi07G000176	Watermelon (Charleston Gray)	wcgwgoB248
Bhi07G000176	Watermelon (97103) v2	wgowmbB510
Bhi07G000176	Watermelon (97103) v1	wgowmB557
Bhi07G000176	Silver-seed gourd	carwgoB0660
Bhi07G000176	Silver-seed gourd	carwgoB1110