MELO3C007112.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007112.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionGalactosyltransferase family protein
Locationchr08 : 898069 .. 898631 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAATCTAAATATCCGATTGAGTTTGAATGATTAAAATTGTTTTCGAGTGATTTTAACCATTACATACATATACATACATACATACATGTGTGTATATATATGTGTGTGTTAGGTGGTATCACCCAGAGCCAAAATATTGATTTCAAGTATTCCCCCACATCCATTCAGCTCCTAGTCTAAGAAAATCCTCAATAAATATCGCCCGAAAGCTTGGATTCACTCTCAGGCTCTCAACAAGACCAAGTAGAGCTTGGAGAGCATCACATTCTCAACCACCATCCTCCAACACTCAAACCCCTCCGAAAAATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA

mRNA sequence

GTAAATCTAAATATCCGATTGAGTTTGAATGATTAAAATTGTTTTCGAGTGATTTTAACCATTACATACATATACATACATACATACATGTGTGTATATATATGTGTGTGTTAGGTGGTATCACCCAGAGCCAAAATATTGATTTCAAGTATTCCCCCACATCCATTCAGCTCCTAGTCTAAGAAAATCCTCAATAAATATCGCCCGAAAGCTTGGATTCACTCTCAGGCTCTCAACAAGACCAAGTAGAGCTTGGAGAGCATCACATTCTCAACCACCATCCTCCAACACTCAAACCCCTCCGAAAAATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA

Coding sequence (CDS)

ATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA

Protein sequence

MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPQRSLSSSSTSASMAVGANSMYFVRNISRPFSKFND
Homology
[Close]
BLAST of MELO3C007112.2 vs. NCBI nr
Match: KGN49420.1 (hypothetical protein Csa_6G524100 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 3.1e-33
Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPQRSLSSSSTSA 60
          MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAP RSLSSS+TSA
Sbjct: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPPRSLSSSTTSA 60

Query: 61 SMAVGANSMYFVRNISRPFSKFND 85
          SM V ANSMYFVRNISRPFSK ND
Sbjct: 61 SMVVAANSMYFVRNISRPFSKIND 84

[Close]
BLAST of MELO3C007112.2 vs. NCBI nr
Match: PNT12371.1 (hypothetical protein POPTR_011G081000v3 [Populus trichocarpa])

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 1   MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNE-YPAAPQRSLSSSSTS 60
           MANSRIA+F+TE APPQ ISVMR RTSK+LDTISEEDR+   ++ +P AP  S +  +TS
Sbjct: 143 MANSRIAKFITEAAPPQYISVMRHRTSKMLDTISEEDRDVAASDPFPMAPTSS-TIVTTS 202

Query: 61  ASMAVGANSMYFVRNISRPFSKF 83
           A+     NS YF + I R FS F
Sbjct: 203 ATSVAAKNSTYFFKGIRRSFSLF 224

[Close]
BLAST of MELO3C007112.2 vs. NCBI nr
Match: EXB39518.1 (hypothetical protein L484_011438 [Morus notabilis])

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYP------------AA 60
          MANSRIARF+TEVAPPQ +SVMR RTSKVLDTI EE+R+   N+ P            A 
Sbjct: 1  MANSRIARFITEVAPPQFVSVMRHRTSKVLDTIKEEERDVCANDSPNTSPAKTIPSAHAF 60

Query: 61 PQRSLSSSSTSASMAVGA--NSMYFVRNISRPFSKFN 84
             S SSS+T+    +G+   S YF++ + R FS FN
Sbjct: 61 SSASFSSSTTATKSTIGSCGKSRYFLKEVQRSFSIFN 97

[Close]
BLAST of MELO3C007112.2 vs. NCBI nr
Match: PRQ29508.1 (hypothetical protein RchiOBHm_Chr5g0014631 [Rosa chinensis])

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-12
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 1   MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDREC-----NKNEYP----AAPQR 60
           MAN+R+ARF+TE APPQI+SVMRRRTSKVLDTI+EEDRE      + N  P    A P  
Sbjct: 52  MANARLARFITEAAPPQIVSVMRRRTSKVLDTITEEDREYASPNDSLNSSPKGSSALPSS 111

Query: 61  SLSSSSTSASMAVGANSMYFVRNISRPFSKF 83
           S S+ S  ++ A G ++ YF++ + R  S F
Sbjct: 112 SPSAPSFGSAAAAGTDAKYFLKGVHRSLSMF 142

[Close]
BLAST of MELO3C007112.2 vs. NCBI nr
Match: ESR40270.1 (hypothetical protein CICLE_v10026747mg [Citrus clementina] >KDO51194.1 hypothetical protein CISIN_1g032717mg [Citrus sinensis])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0 

Query: 1   MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPQRSLSSSST-- 60
           MANSRIA+FV EVAPPQ +SVMR RT+K+LDTISEE+++ + ++  A+  RS SS ST  
Sbjct: 45  MANSRIAKFVMEVAPPQFVSVMRHRTAKMLDTISEEEKDVSGSDALASTPRSFSSCSTPS 104

Query: 61  SASMAVGANSMYFVRNI 76
           SAS  V ++S YF+R +
Sbjct: 105 SASAVVASDSKYFLRGV 121

[Close]
BLAST of MELO3C007112.2 vs. TAIR10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1))

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-11
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRE 40
          MA SR+ARF+TEVAPPQ ++VMRRRT+KVLDTI EE+RE
Sbjct: 1  MATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEERE 39

[Close]
BLAST of MELO3C007112.2 vs. TAIR10
Match: AT4G21060.1 (Galactosyltransferase family protein)

HSP 1 Score: 46.2 bits (108), Expect = 1.1e-05
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRR--TSKVLDTISEEDRE 40
          MA SR+ARFV+EVAPPQ ++VMRR     + LDTI EE+ +
Sbjct: 1  MATSRLARFVSEVAPPQFVTVMRRHRAAKQKLDTIKEEENK 41

[Close]
BLAST of MELO3C007112.2 vs. TrEMBL
Match: tr|A0A0A0KI68|A0A0A0KI68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524100 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-33
Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPQRSLSSSSTSA 60
          MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAP RSLSSS+TSA
Sbjct: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPPRSLSSSTTSA 60

Query: 61 SMAVGANSMYFVRNISRPFSKFND 85
          SM V ANSMYFVRNISRPFSK ND
Sbjct: 61 SMVVAANSMYFVRNISRPFSKIND 84

[Close]
BLAST of MELO3C007112.2 vs. TrEMBL
Match: tr|W9QKX7|W9QKX7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011438 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-12
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYP------------AA 60
          MANSRIARF+TEVAPPQ +SVMR RTSKVLDTI EE+R+   N+ P            A 
Sbjct: 1  MANSRIARFITEVAPPQFVSVMRHRTSKVLDTIKEEERDVCANDSPNTSPAKTIPSAHAF 60

Query: 61 PQRSLSSSSTSASMAVGA--NSMYFVRNISRPFSKFN 84
             S SSS+T+    +G+   S YF++ + R FS FN
Sbjct: 61 SSASFSSSTTATKSTIGSCGKSRYFLKEVQRSFSIFN 97

[Close]
BLAST of MELO3C007112.2 vs. TrEMBL
Match: tr|A0A2K1YH65|A0A2K1YH65_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081000v3 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-12
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 1   MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNE-YPAAPQRSLSSSSTS 60
           MANSRIA+F+TE APPQ ISVMR RTSK+LDTISEEDR+   ++ +P AP  S +  +TS
Sbjct: 143 MANSRIAKFITEAAPPQYISVMRHRTSKMLDTISEEDRDVAASDPFPMAPTSS-TIVTTS 202

Query: 61  ASMAVGANSMYFVRNISRPFSKF 83
           A+     NS YF + I R FS F
Sbjct: 203 ATSVAAKNSTYFFKGIRRSFSLF 224

[Close]
BLAST of MELO3C007112.2 vs. TrEMBL
Match: tr|A0A2P6Q5Q7|A0A2P6Q5Q7_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0014631 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-12
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 1   MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDREC-----NKNEYP----AAPQR 60
           MAN+R+ARF+TE APPQI+SVMRRRTSKVLDTI+EEDRE      + N  P    A P  
Sbjct: 52  MANARLARFITEAAPPQIVSVMRRRTSKVLDTITEEDREYASPNDSLNSSPKGSSALPSS 111

Query: 61  SLSSSSTSASMAVGANSMYFVRNISRPFSKF 83
           S S+ S  ++ A G ++ YF++ + R  S F
Sbjct: 112 SPSAPSFGSAAAAGTDAKYFLKGVHRSLSMF 142

[Close]
BLAST of MELO3C007112.2 vs. TrEMBL
Match: tr|A0A2P2KIQ7|A0A2P2KIQ7_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.8e-12
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0 

Query: 1  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNE----YPAAPQRSLSSS 60
          MANSRIARF++EVAPPQ I+V+R R SK+LDTISEEDR+ N N+     P +P     + 
Sbjct: 1  MANSRIARFISEVAPPQYITVVRSRASKMLDTISEEDRDANANDSVVASPKSPTSIAFTI 60

Query: 61 STSASMAVGANSMYFVRNISRPFSKFND 85
          S+ A+     NS YF++ + + FS F++
Sbjct: 61 SSCATSVAATNSKYFLKEVQKSFSIFDN 88

The following BLAST results are available for this feature:
BLAST of MELO3C007112.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49420.13.1e-3394.05hypothetical protein Csa_6G524100 [Cucumis sativus][more]
PNT12371.11.8e-1257.83hypothetical protein POPTR_011G081000v3 [Populus trichocarpa][more]
EXB39518.11.8e-1250.52hypothetical protein L484_011438 [Morus notabilis][more]
PRQ29508.15.2e-1251.65hypothetical protein RchiOBHm_Chr5g0014631 [Rosa chinensis][more]
ESR40270.11.5e-1157.14hypothetical protein CICLE_v10026747mg [Citrus clementina] >KDO51194.1 hypotheti... [more]
BLAST of MELO3C007112.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30260.15.3e-1176.92BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein... [more]
AT4G21060.11.1e-0558.54Galactosyltransferase family protein[more]
BLAST of MELO3C007112.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007112.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KI68|A0A0A0KI68_CUCSA2.1e-3394.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524100 PE=4 SV=1[more]
tr|W9QKX7|W9QKX7_9ROSA1.2e-1250.52Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011438 PE=4 SV=1[more]
tr|A0A2K1YH65|A0A2K1YH65_POPTR1.2e-1257.83Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081000v3 PE=... [more]
tr|A0A2P6Q5Q7|A0A2P6Q5Q7_ROSCH3.4e-1251.65Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0014631 PE=4... [more]
tr|A0A2P2KIQ7|A0A2P2KIQ7_RHIMU5.8e-1248.86Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007112.2.1MELO3C007112.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..57
NoneNo IPR availablePANTHERPTHR35101:SF9SUBFAMILY NOT NAMEDcoord: 1..83
NoneNo IPR availablePANTHERPTHR35101FAMILY NOT NAMEDcoord: 1..83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007112.2Csa6G524100Cucumber (Chinese Long) v2cumedB486
MELO3C007112.2CSPI06G36520Wild cucumber (PI 183967)cpimedB496
MELO3C007112.2CmaCh07G000860Cucurbita maxima (Rimu)cmamedB897
MELO3C007112.2CmoCh03G014170Cucurbita moschata (Rifu)cmomedB695
MELO3C007112.2CsGy6G035840Cucumber (Gy14) v2cgybmedB442
MELO3C007112.2ClCG01G024840Watermelon (Charleston Gray)medwcgB510
MELO3C007112.2Bhi08G001659Wax gourdmedwgoB671
MELO3C007112.2CsaV3_6G051960Cucumber (Chinese Long) v3cucmedB508
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007112.2Silver-seed gourdcarmedB0312
MELO3C007112.2Silver-seed gourdcarmedB0433
MELO3C007112.2Silver-seed gourdcarmedB0736
MELO3C007112.2Watermelon (97103) v2medwmbB507
MELO3C007112.2Watermelon (97103) v2medwmbB523
MELO3C007112.2Wax gourdmedwgoB657
MELO3C007112.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007112.2Cucumber (Gy14) v1cgymedB025
MELO3C007112.2Cucurbita maxima (Rimu)cmamedB440
MELO3C007112.2Cucurbita maxima (Rimu)cmamedB704
MELO3C007112.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007112.2Cucurbita moschata (Rifu)cmomedB429
MELO3C007112.2Cucurbita moschata (Rifu)cmomedB886
MELO3C007112.2Cucurbita pepo (Zucchini)cpemedB052
MELO3C007112.2Cucurbita pepo (Zucchini)cpemedB081
MELO3C007112.2Cucurbita pepo (Zucchini)cpemedB540
MELO3C007112.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007112.2Melon (DHL92) v3.6.1medmedB074
MELO3C007112.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007112.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007112.2Watermelon (Charleston Gray)medwcgB518
MELO3C007112.2Watermelon (97103) v1medwmB549
MELO3C007112.2Watermelon (97103) v1medwmB561