MELO3C007079.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007079.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	DNA-damage-repair/toleration protein DRT111, chloroplastic
Location	chr08 : 627649 .. 631571 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAATGTGTACTATTCCAGTTTCTCTAATACTTAACCATATGTTTGTTAATTCGTCTTTCTCGGTTAATTTATAGATTTAGGCTATTTTATACACTTTTTCCGTTTTCACACTGTTTACCAATCCGTCACCATCCGTATTTTGCTGGGAAAACCCTATTTTCCTACTTCATCACTGTCACTCAAATCCCTAAATTTTGAGTACTCGAAGAATTTGCAAATTTATCAAATTTTGCCGACCACCGTAACTGGAAAATTCCTTCTTCGACTCCGTTCCCATCTTGAAATTTCCGATGTTCTAGATATTTCAAGGAGAGAAGACAAAAGCTAGGCGTACGAATATGCTTGGTGGATTGTACGGGGACCTTCCACCGCCCTCTTCGGCGGAGGAAGATAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGCAAGCCATCGTCCGTCTTCGCGCCACAGACTGTTCTCAGATCTCAAAACAAAATAAAAGCCGCCACCTTGACACACCCTAAGGCTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCCATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTATAGAAGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGATGAACGAGAAAGAGAACATTCCGATTCCAGGATAAATATCTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGATGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGGGTTGGTGCTGGCGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGGATTACCACTCCTCTGATGGCGAAAAAGACAGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGCGAAGAGTGTCAACTTCAACGGACTGCCTACTCGGGTTCTTCTACTCAGAAACATGGTACGTCAGTGTAGAATTCTGACAATTTGTTAATTTTAAATGAGTTTTAGGTAGCAGAGTTTGTTTTCGGGACATTAGAATTTTGTAGTTCTTGCTCATTGCTCTGAATTTTTGCAGCTCTTAGTTAAATTGGATAAAAAATTGGGAAGTAGGTTGATATTTGAATGGGAAATTTCTGGTTATGTCATAGCTTTCCTCGGGTTTCATTGGTTATTTCTGTTTATATCCCAAACCAAGGTTTTATTTTGGAAGAGGTCTAACTGAGGAAATAGAGGAGGCAAGAGGCCTGATTCAAATTCTAGATGACCTACAACCTTTGTGGTAGGCAGGAGAAATGGATTTGGGGAATAAATCCTTCATTACTGGTAAAAAATCTCGTTGGATCAGAGACTGGAAAAAGGAGGCAAAAATCTCTTGGTTTAATGTTGCCAAGCCATTGTCTAGAGATATAAACTCAAAGATATAAAAAATTATTATTAAATGAACATACAAGTTCTGAATAAGTAGGGTTTTTGGTTTTTGAAAACTGTTCTTTTTTCTCCTATTATTTTTACGGTGAGTTTTCATCTTTGTTAAGGAAACTTTTGAATTCTTAGCTAAATTTTGATTTTTTTTTTTCTTTAGTGTCCAAAAACTTGTTAATTGTATCTAAATGTTTTGGGTCTGATACTACTGGGGTTTAATGAAGTTAGTTGGTAAAGAGGTACTATTACTGCTAGAGTATGAGCTGCTTTCAAGCTTTAACGGAAGCTGTCATTTTCTGTATTCTATTTTGTAAACCTCCATTTTGGTCATGAGTTAACATTCAGCTTTTTTATTTGATCATAGAGGTTATTTAAACACCTTATGTGAGAATATACTCTCGTGAAAGACAACTGCACGTGGAGTTTCATGACAAATGTATGACGGATTGTGTAAATATGGTAGAAAAAACAAGATATAGTTCAGATTATTATTTAACATAAGAATCTTGTTTTACATGGTTGAACCTTTCCCTCCCTGTATCCTAGCGACTACTACATATAATTGTGAAGCTAGGTTATGTTTTAATTGTCACTAAACGATTTAGATGATAGAAGTAACATGTGGTTTAATATTCTAATCTTTCATTTGTGCTTTGGAGATTTAGTATTTTCCACTGTTAAATAATTTAACGGATTTTACATCCTTTAAGCGTTTGAATTAGGAGAGTTAGACAAGGTAATTGGAATTTGGGAGGTATACTAGTGTATATAAACTGATGAGCGAGACTGTGAGAGGGAGAGAGCAGACCTCTTATCCTGCACTTGTATGGGATACTTATCATGAATAGAGGTTACGAAATTTCTAGCATAAACATGAAATTTTGATCAACTAACAATAAAAGATGTTGGGCCGAATGTTTTGAGGTGGCAAATTTGAATGCTTCTCAGTGGTGTTCTCATCCCAAATTATTTACTGGGATTTCTTTATAGGATATTTATTGGAGTTTGGGAAGCTTTATATTTTCTCAGTTTTTAATTTCTCTCCCTTTTGAAATTTGTATCTTTGAAAAGTAGTCTAGAACAAAAAAGGAAAAAACAATATCAATCAAGATAGGGATTCATCATTATGTTAGAAGAGTATCAACTTGTAGGGATATTTCTTTATAACCCAGATCAATTTCAGTTTTGATAGACGTGATCACACGTGAGTATAGTATGCTCTATTTATGCATAAGGCCAGCGAGTGTTTTATCTCTGAGGATATATCAATGATCGAGCCTTCGATGAATGAAGCATCTTTAGAAACCACTGCATTTTTCTTCAGACGTCTAAAGCATCTAAATCTGTGATTTTTTCTGATGAGAATAATGAGAATGGCTGCCTTGTTTGATTTTTCTTGAAGGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGGGTTCTAATATTCGAGATTACAGAACCCAATTTTCCCGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGATGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGAAATCCACAAAATACAAAAGAAAAAAAAAACGTCAAACACGCTCATTCTTGGTTGATGAAGCTACGATTAATTTGGAATGGATTGTGCAATAACTTTCCTATTGTAAAGAGATTTTCTCATGATGTTGCTGACTGAATGAACGAAGCTCAAGAATGGAATTGTTGAACTTGAAATGATCTTATTTATTAACTAGTGAAGATTGTTCTAATCTAATAGTTGCTTGAGCATGATGCCTGTTAATTCAAACAAAAGGTTCTTGTTTCGTTCGGAGATCATTTTTGTTTTTTTTTCTTGAGACGGACTGAATGATGGTGCACTTGGTAAGTGACATTTTAACCATCCAAGGTGTTTTTGACGAGTTCATTTTTTCTTGTATTCATAGTTCTGTTGGTTAATAAAAGCTTAGCAAGTTTAGCTTATTTATTTAGTCCCAGATTCAATGATGTCTCGATTGAATGGTTTCAACCAATATTGTAATATGGTTTTGTTGGTACAATAAGAGACTGACAGCATCTCTATTTGAATACACGACAAACTGATGAAGATTAGCATTGTTTTGGGCTTCTAGTGGATTGTCATTGGGCTTTGACTGTAG

mRNA sequence

AAGAAAAATGTGTACTATTCCAGTTTCTCTAATACTTAACCATATGTTTGTTAATTCGTCTTTCTCGGTTAATTTATAGATTTAGGCTATTTTATACACTTTTTCCGTTTTCACACTGTTTACCAATCCGTCACCATCCGTATTTTGCTGGGAAAACCCTATTTTCCTACTTCATCACTGTCACTCAAATCCCTAAATTTTGAGTACTCGAAGAATTTGCAAATTTATCAAATTTTGCCGACCACCGTAACTGGAAAATTCCTTCTTCGACTCCGTTCCCATCTTGAAATTTCCGATGTTCTAGATATTTCAAGGAGAGAAGACAAAAGCTAGGCGTACGAATATGCTTGGTGGATTGTACGGGGACCTTCCACCGCCCTCTTCGGCGGAGGAAGATAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGCAAGCCATCGTCCGTCTTCGCGCCACAGACTGTTCTCAGATCTCAAAACAAAATAAAAGCCGCCACCTTGACACACCCTAAGGCTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCCATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTATAGAAGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGATGAACGAGAAAGAGAACATTCCGATTCCAGGATAAATATCTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGATGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGGGTTGGTGCTGGCGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGGATTACCACTCCTCTGATGGCGAAAAAGACAGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGCGAAGAGTGTCAACTTCAACGGACTGCCTACTCGGGTTCTTCTACTCAGAAACATGACGTCTAAAGCATCTAAATCTGTGATTTTTTCTGATGAGAATAATGAGAATGGCTGCCTTGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGGGTTCTAATATTCGAGATTACAGAACCCAATTTTCCCGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGATGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGAAATCCACAAAATACAAAAGAAAAAAAAAACGTCAAACACGCTCATTCTTGGTTGATGAAGCTACGATTAATTTGGAATGGATTGTGCAATAACTTTCCTATTGTAAAGAGATTTTCTCATGATGTTGCTGACTGAATGAACGAAGCTCAAGAATGGAATTGTTGAACTTGAAATGATCTTATTTATTAACTAGTGAAGATTGTTCTAATCTAATAGTTGCTTGAGCATGATGCCTGTTAATTCAAACAAAAGGTTCTTGTTTCGTTCGGAGATCATTTTTGTTTTTTTTTCTTGAGACGGACTGAATGATGGTGCACTTGGTAAGTGACATTTTAACCATCCAAGGTGTTTTTGACGAGTTCATTTTTTCTTGTATTCATAGTTCTGTTGGTTAATAAAAGCTTAGCAAGTTTAGCTTATTTATTTAGTCCCAGATTCAATGATGTCTCGATTGAATGGTTTCAACCAATATTGTAATATGGTTTTGTTGGTACAATAAGAGACTGACAGCATCTCTATTTGAATACACGACAAACTGATGAAGATTAGCATTGTTTTGGGCTTCTAGTGGATTGTCATTGGGCTTTGACTGTAG

Coding sequence (CDS)

ATGCTTGGTGGATTGTACGGGGACCTTCCACCGCCCTCTTCGGCGGAGGAAGATAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGCAAGCCATCGTCCGTCTTCGCGCCACAGACTGTTCTCAGATCTCAAAACAAAATAAAAGCCGCCACCTTGACACACCCTAAGGCTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCCATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTATAGAAGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGATGAACGAGAAAGAGAACATTCCGATTCCAGGATAAATATCTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGATGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGGGTTGGTGCTGGCGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGGATTACCACTCCTCTGATGGCGAAAAAGACAGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGCGAAGAGTGTCAACTTCAACGGACTGCCTACTCGGGTTCTTCTACTCAGAAACATGACGTCTAAAGCATCTAAATCTGTGATTTTTTCTGATGAGAATAATGAGAATGGCTGCCTTGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGGGTTCTAATATTCGAGATTACAGAACCCAATTTTCCCGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGATGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGA

Protein sequence

MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAATLTHPKASVSTQVEASQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKERDEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGFT

Homology

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BLAST of MELO3C007079.2 vs. NCBI nr
Match: XP_008439555.1 (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis melo])

HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141
Identity = 372/392 (94.90%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVVRATFYDEERFSKNELAPMPGEVPGFT
Sbjct: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 372

[Close]

BLAST of MELO3C007079.2 vs. NCBI nr
Match: XP_023543834.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 1.9e-133
Identity = 309/392 (78.83%), Postives = 316/392 (80.61%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQ+++KAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSRMKAAN 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L H KA                                              XXXXXXXX
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKK KSVNFNG PTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVV+ATFYDEERFSKNELAPMPGE+PGFT
Sbjct: 361 FGGRVVQATFYDEERFSKNELAPMPGEIPGFT 372

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BLAST of MELO3C007079.2 vs. NCBI nr
Match: XP_022925977.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata] >XP_022925978.1 DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 458.0 bits (1177), Expect = 3.3e-125
Identity = 300/392 (76.53%), Postives = 305/392 (77.81%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKMAPPTLR             SQ+KIKAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRXXXXXXXXXXXXXSQSKIKAAN 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L H KA                                             XXXXXXXXX
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKK KSVNFNG PTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVV+ATFYDEERFSKNELAPMPGE+PGFT
Sbjct: 361 FGGRVVQATFYDEERFSKNELAPMPGEIPGFT 372

[Close]

BLAST of MELO3C007079.2 vs. NCBI nr
Match: XP_022978020.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 456.8 bits (1174), Expect = 7.2e-125
Identity = 299/392 (76.28%), Postives = 305/392 (77.81%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKMAPPTLR             SQ+KIKAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRXXXXXXXXXXXXXSQSKIKAAN 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L H KA                                             XXXXXXXXX
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NISGEEAWRRRAAKSGAIPRSPSPP+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPN 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKK KSVNFNG PTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVV+ATFYDEERFSKNELAPMPGE+PGFT
Sbjct: 361 FGGRVVQATFYDEERFSKNELAPMPGEIPGFT 372

[Close]

BLAST of MELO3C007079.2 vs. NCBI nr
Match: XP_022146691.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia])

HSP 1 Score: 450.3 bits (1157), Expect = 6.8e-123
Identity = 295/392 (75.26%), Postives = 298/392 (76.02%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAP  LR                    AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPXXLRXXXXXXXXXXXXXXXXXXXXAT 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            THPKA                                              XXXXXXXX
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKK KSVNFNG PTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVVRATFYDEERFSKNELAPMPGEVPGFT
Sbjct: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 372

[Close]

BLAST of MELO3C007079.2 vs. TAIR10
Match: AT1G30480.1 (D111/G-patch domain-containing protein)

HSP 1 Score: 337.8 bits (865), Expect = 8.9e-93
Identity = 181/245 (73.88%), Postives = 193/245 (78.78%), Query Frame = 0


Query: 155 NISGEEAWRRRAA----KSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMM 214
           NISGEEAW+RRAA             SPP +VDGFSIGKSET GLGVGAGGQMTAAQRMM
Sbjct: 163 NISGEEAWKRRAAXXXXXXXXXXXXSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMM 222

Query: 215 AKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKAKSVNFNGLPT 274
           AKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K  KSVN NG PT
Sbjct: 223 AKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPT 282

Query: 275 RVLLLRNMTSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEI 334
           RVLLLRNM                    VGPG+VDDELE+EVG EC KYGTVTRVLIFEI
Sbjct: 283 RVLLLRNM--------------------VGPGQVDDELEDEVGGECGKYGTVTRVLIFEI 342

Query: 335 TEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPG 392
           TEPNFPV EAVRIFVQF R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PG
Sbjct: 343 TEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPG 387

[Close]

BLAST of MELO3C007079.2 vs. TAIR10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 22/78 (28.21%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 303 ELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFG 362
           ++ E++  E  K+G +T V+I   +    PV    ++F+++  ++ +T+A   ++GR FG
Sbjct: 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552

Query: 363 GRVVRATFYDEERFSKNE 381
           G  V A +Y E++F + +
Sbjct: 553 GNEVVAVYYPEDKFEQGD 570

[Close]

BLAST of MELO3C007079.2 vs. Swiss-Prot
Match: sp|P42698|DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT111 PE=1 SV=2)

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-91
Identity = 181/245 (73.88%), Postives = 193/245 (78.78%), Query Frame = 0


Query: 155 NISGEEAWRRRAA----KSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMM 214
           NISGEEAW+RRAA             SPP +VDGFSIGKSET GLGVGAGGQMTAAQRMM
Sbjct: 163 NISGEEAWKRRAAXXXXXXXXXXXXSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMM 222

Query: 215 AKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKAKSVNFNGLPT 274
           AKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K  KSVN NG PT
Sbjct: 223 AKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPT 282

Query: 275 RVLLLRNMTSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEI 334
           RVLLLRNM                    VGPG+VDDELE+EVG EC KYGTVTRVLIFEI
Sbjct: 283 RVLLLRNM--------------------VGPGQVDDELEDEVGGECGKYGTVTRVLIFEI 342

Query: 335 TEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPG 392
           TEPNFPV EAVRIFVQF R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PG
Sbjct: 343 TEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPG 387

[Close]

BLAST of MELO3C007079.2 vs. Swiss-Prot
Match: sp|Q96I25|SPF45_HUMAN (Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-33
Identity = 85/184 (46.20%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 204 TAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKAKS----- 263
           T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ +   KS     
Sbjct: 237 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPL 296

Query: 264 VNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTV 323
                 PT+V+LLRNM                    VG GEVD++LE E   EC KYG V
Sbjct: 297 TEILKCPTKVVLLRNM--------------------VGAGEVDEDLEVETKEECEKYGKV 356

Query: 324 TRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSK 383
            + +IFEI  P  P DEAVRIF++FER E   KA+VDL+GRYFGGRVV+A FY+ ++F  
Sbjct: 357 GKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRV 398

[Close]

BLAST of MELO3C007079.2 vs. Swiss-Prot
Match: sp|Q8JZX4|SPF45_MOUSE (Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.8e-33
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 204 TAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDT---KSEKKAKSVN 263
           T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T   +++  +K  +
Sbjct: 237 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEAQDASKKSD 296

Query: 264 FNGL------PTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAK 323
            N L      PT+V+LLRNM                    VG GEVD++LE E   EC K
Sbjct: 297 SNPLTEILKCPTKVVLLRNM--------------------VGAGEVDEDLEVETKEECEK 356

Query: 324 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEE 383
           YG V + +IFEI  P  P DEAVRIF++FER E   KA+VDL+GRYFGGRVV+A FY+ +
Sbjct: 357 YGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLD 402

[Close]

BLAST of MELO3C007079.2 vs. Swiss-Prot
Match: sp|Q2HJG2|PUF60_BOVIN (Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-14
Identity = 50/169 (29.59%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 227 GITTPLMAKKTDLRAGVIVNANDTKSEK------------KAKSVNFNGLPTRVLLLRNM 286
           G+  P++A    L  G++    + + E+            + + ++ +G   R ++++ +
Sbjct: 369 GVVNPILASPPTL--GLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKL 428

Query: 287 TSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPV 346
             K   +V+          +V P ++DD+LE EV  EC K+G V RV+I++  +      
Sbjct: 429 LRKQESTVMVLRN------MVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDA 488

Query: 347 DEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 383
           +  V+IFV+F  + ET KA+ DL+GR+F GR V A  YD+ERF  ++L+
Sbjct: 489 EIIVKIFVEFSVASETHKAIQDLNGRWFAGRKVVAEVYDQERFDNSDLS 529

[Close]

BLAST of MELO3C007079.2 vs. Swiss-Prot
Match: sp|Q3UEB3|PUF60_MOUSE (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-14
Identity = 50/169 (29.59%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 227 GITTPLMAKKTDLRAGVIVNANDTKSEK------------KAKSVNFNGLPTRVLLLRNM 286
           G+  P++A    L  G++    + + E+            + + ++ +G   R ++++ +
Sbjct: 403 GVVNPILASPPTL--GLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKL 462

Query: 287 TSKASKSVIFSDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPV 346
             K   +V+          +V P ++DD+LE EV  EC K+G V RV+I++  +      
Sbjct: 463 LRKQESTVMVLRN------MVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDA 522

Query: 347 DEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 383
           +  V+IFV+F  + ET KA+  L+GR+FGGR V A  YD+ERF  ++L+
Sbjct: 523 EIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563

[Close]

BLAST of MELO3C007079.2 vs. TrEMBL
Match: tr|A0A1S3AYL8|A0A1S3AYL8_CUCME (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484318 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 9.6e-142
Identity = 372/392 (94.90%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVVRATFYDEERFSKNELAPMPGEVPGFT
Sbjct: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 372

[Close]

BLAST of MELO3C007079.2 vs. TrEMBL
Match: tr|W9RFT6|W9RFT6_9ROSA (DNA-damage-repair/toleration protein OS=Morus notabilis OX=981085 GN=L484_026016 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.0e-119
Identity = 288/397 (72.54%), Postives = 302/397 (76.07%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA-PQTVLRSQNKIKAA 60
           MLGGLYGDLPPPSSA+E+KP+NSTVWS+STKMAPPTLRKP+SVFA PQ +L++QNK K  
Sbjct: 1   MLGGLYGDLPPPSSADEEKPSNSTVWSTSTKMAPPTLRKPASVFAPPQMILKTQNKQKPG 60

Query: 61  TLTHPK-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                K     A                                           XXXXX
Sbjct: 61  NSAQLKAVASPAVALLPTVVPEPVAQPALVGVTSTVLEEYDPARPNDYEDYRREKXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       NISGEEAWRRRAA SGA+PR
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDDSRLNISGEEAWRRRAAMSGALPR 180

Query: 181 SPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240
           SPSPPSS DGF IGKSETGGLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA
Sbjct: 181 SPSPPSSGDGFIIGKSETGGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240

Query: 241 KKTDLRAGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCL 300
           KKTD RAGVIVNA++ K EKK KSVN NG PTRVLLLRNM                    
Sbjct: 241 KKTDRRAGVIVNASEAKPEKKVKSVNLNGPPTRVLLLRNM-------------------- 300

Query: 301 VGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALV 360
           VGPGEVDDELE+EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+
Sbjct: 301 VGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALI 360

Query: 361 DLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 392
           DLDGR+FGGRVVRATFYDEERFSKNELAPMPGEVPGF
Sbjct: 361 DLDGRFFGGRVVRATFYDEERFSKNELAPMPGEVPGF 377

[Close]

BLAST of MELO3C007079.2 vs. TrEMBL
Match: tr|A0A2P5FT48|A0A2P5FT48_9ROSA (Splicing factor, SPF OS=Trema orientalis OX=63057 GN=TorRG33x02_031490 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.8e-119
Identity = 294/404 (72.77%), Postives = 313/404 (77.48%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA-PQTVLRSQNKIKAA 60
           MLGGLYGDLPPPSSA+E+KPTNSTVWSSSTKMAPPTLRKPSSVFA PQT+L++Q+K K+ 
Sbjct: 1   MLGGLYGDLPPPSSADEEKPTNSTVWSSSTKMAPPTLRKPSSVFAPPQTILKTQSKNKSG 60

Query: 61  TLTHPK------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
               PK                                                XXXXXX
Sbjct: 61  NSVPPKGIASPAVAPLPSVSPELVVQPALVGVTSTVIEEYDPARPNDYEEYRREXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      NISGEEAWRRRAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDSRLNISGEEAWRRRAA 180

Query: 181 KSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQG 240
            SGA+PRSPSPP++ DGF+IGKSET GLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQG
Sbjct: 181 MSGAVPRSPSPPNNGDGFAIGKSETSGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQG 240

Query: 241 ITTPLMAKKTDLRAGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDE 300
           ITTPLMAKKTD RAGVIVNA+++K EKK KSVN NG PTRVL+LRNM             
Sbjct: 241 ITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNLNGPPTRVLMLRNM------------- 300

Query: 301 NNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 360
                  VGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE
Sbjct: 301 -------VGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 360

Query: 361 ETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 392
           ETTKAL+DLDGRYFGGR+VRA+FYDEERF KNELAPMPGE+PGF
Sbjct: 361 ETTKALIDLDGRYFGGRIVRASFYDEERFGKNELAPMPGEIPGF 384

[Close]

BLAST of MELO3C007079.2 vs. TrEMBL
Match: tr|A0A2P5C166|A0A2P5C166_PARAD (Splicing factor, SPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192700 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.0e-119
Identity = 296/406 (72.91%), Postives = 315/406 (77.59%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA-PQTVLRSQNKIKAA 60
           MLGGLYGDLPPPSSA+E+KPTNSTVWSSSTKMAPPTLRKPSSVFA PQT+L++Q+K K+A
Sbjct: 1   MLGGLYGDLPPPSSADEEKPTNSTVWSSSTKMAPPTLRKPSSVFAPPQTILKTQSKNKSA 60

Query: 61  TLTHPKA--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
               PK                                                XXXXXX
Sbjct: 61  NSVPPKGITSPAVAPLASVSPELVVQPALVGVTSTVIEEYDPARPNDYEEYRREXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      NISGEEAWRRR
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDSRLNISGEEAWRRR 180

Query: 181 AAKSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQE 240
           AA SG +PRSPSPP++ DGF+IGKSET GLGVGAGG MTAAQRMMAKMGWKEGQGLGKQE
Sbjct: 181 AAMSGTVPRSPSPPNNGDGFAIGKSETSGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQE 240

Query: 241 QGITTPLMAKKTDLRAGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFS 300
           QGITTPLMAKKTD RAGVIVNA+++K EKK KSVN NG PTRVL+LRNM           
Sbjct: 241 QGITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNLNGPPTRVLMLRNM----------- 300

Query: 301 DENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 360
                    VGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER
Sbjct: 301 ---------VGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 360

Query: 361 SEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 392
           SEETTKAL+DLDGRYFGGR+VRA+FYDEERF KNELAPMPGE+PGF
Sbjct: 361 SEETTKALIDLDGRYFGGRIVRASFYDEERFGKNELAPMPGEIPGF 386

[Close]

BLAST of MELO3C007079.2 vs. TrEMBL
Match: tr|A0A0A0KP45|A0A0A0KP45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.7e-117
Identity = 306/392 (78.06%), Postives = 306/392 (78.06%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKM                            
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  LTHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                 XXXXXXXXXXX                              XXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMTSKASKSVIFSDENNENGCLVGPGEV 300
           AGVIVNANDTKSEKK KSVNFNGLPTRVLLLRNM                    VGPGEV
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNM--------------------VGPGEV 300

Query: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360
           DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY
Sbjct: 301 DDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRY 360

Query: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 393
           FGGRVVRATFYDEERFSKNELAPMPGEVPGFT
Sbjct: 361 FGGRVVRATFYDEERFSKNELAPMPGEVPGFT 372

The following BLAST results are available for this feature:

BLAST of MELO3C007079.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439555.1	1.5e-141	94.90	PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis m...	[more]
XP_023543834.1	1.9e-133	78.83	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo ...	[more]
XP_022925977.1	3.3e-125	76.53	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita mosch...	[more]
XP_022978020.1	7.2e-125	76.28	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxim...	[more]
XP_022146691.1	6.8e-123	75.26	DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia]	[more]

BLAST of MELO3C007079.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30480.1	8.9e-93	73.88	D111/G-patch domain-containing protein	[more]
AT4G36690.1	1.1e-05	28.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

BLAST of MELO3C007079.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42698\|DR111_ARATH	1.6e-91	73.88	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q96I25\|SPF45_HUMAN	1.2e-33	46.20	Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1	[more]
sp\|Q8JZX4\|SPF45_MOUSE	5.8e-33	45.74	Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1	[more]
sp\|Q2HJG2\|PUF60_BOVIN	1.6e-14	29.59	Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1	[more]
sp\|Q3UEB3\|PUF60_MOUSE	1.6e-14	29.59	Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=...	[more]

BLAST of MELO3C007079.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYL8\|A0A1S3AYL8_CUCME	9.6e-142	94.90	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Cucumis melo OX=36...	[more]
tr\|W9RFT6\|W9RFT6_9ROSA	1.0e-119	72.54	DNA-damage-repair/toleration protein OS=Morus notabilis OX=981085 GN=L484_026016...	[more]
tr\|A0A2P5FT48\|A0A2P5FT48_9ROSA	1.8e-119	72.77	Splicing factor, SPF OS=Trema orientalis OX=63057 GN=TorRG33x02_031490 PE=4 SV=1	[more]
tr\|A0A2P5C166\|A0A2P5C166_PARAD	3.0e-119	72.91	Splicing factor, SPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192700 PE=4 ...	[more]
tr\|A0A0A0KP45\|A0A0A0KP45_CUCSA	1.7e-117	78.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043484	regulation of RNA splicing
GO:0006281	DNA repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR016967	Splicing_factor_SPF45
IPR000467	G_patch_dom
IPR003954	RRM_dom_euk

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0043484	regulation of RNA splicing
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0043687	post-translational protein modification
biological_process	GO:0010212	response to ionizing radiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007079.2.1	MELO3C007079.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..199
None	No IPR available	PANTHER	PTHR13288	DNA-DAMAGE REPAIR PROTEIN DRT111	coord: 294..382 coord: 1..277
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 293..369 e-value: 1.6E-22 score: 90.8
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 200..246 e-value: 1.4E-15 score: 67.8
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 205..244 e-value: 9.8E-17 score: 60.5
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 202..248 score: 15.451
IPR016967	Splicing factor, SPF45	PIRSF	PIRSF031066	SPF45	coord: 3..280 e-value: 7.2E-63 score: 211.2 coord: 292..388 e-value: 3.8E-49 score: 166.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 262..384 e-value: 6.2E-22 score: 79.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 267..373 score: 9.098
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 295..375

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007079.2	Csa6G525420	Cucumber (Chinese Long) v2	cumedB486
MELO3C007079.2	CSPI06G36810	Wild cucumber (PI 183967)	cpimedB496
MELO3C007079.2	Cucsa.048210	Cucumber (Gy14) v1	cgymedB025
MELO3C007079.2	CmaCh03G014440	Cucurbita maxima (Rimu)	cmamedB704
MELO3C007079.2	CmaCh07G000640	Cucurbita maxima (Rimu)	cmamedB897
MELO3C007079.2	CmoCh07G000660	Cucurbita moschata (Rifu)	cmomedB886
MELO3C007079.2	CmoCh03G014410	Cucurbita moschata (Rifu)	cmomedB695
MELO3C007079.2	Lsi01G000860	Bottle gourd (USVL1VR-Ls)	lsimedB156
MELO3C007079.2	Cp4.1LG19g05670	Cucurbita pepo (Zucchini)	cpemedB540
MELO3C007079.2	Cp4.1LG10g06340	Cucurbita pepo (Zucchini)	cpemedB081
MELO3C007079.2	CsGy6G036190	Cucumber (Gy14) v2	cgybmedB442
MELO3C007079.2	Cla009824	Watermelon (97103) v1	medwmB561
MELO3C007079.2	ClCG01G025100	Watermelon (Charleston Gray)	medwcgB510
MELO3C007079.2	Cla97C01G025150	Watermelon (97103) v2	medwmbB507
MELO3C007079.2	Bhi03G000141	Wax gourd	medwgoB657
MELO3C007079.2	Carg14969	Silver-seed gourd	carmedB0736
MELO3C007079.2	Carg19310	Silver-seed gourd	carmedB0312
MELO3C007079.2	CsaV3_6G052300	Cucumber (Chinese Long) v3	cucmedB508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007079.2	Cucurbita maxima (Rimu)	cmamedB233
MELO3C007079.2	Cucurbita moschata (Rifu)	cmomedB217
MELO3C007079.2	Cucurbita pepo (Zucchini)	cpemedB572
MELO3C007079.2	Bottle gourd (USVL1VR-Ls)	lsimedB239
MELO3C007079.2	Watermelon (Charleston Gray)	medwcgB518
MELO3C007079.2	Watermelon (97103) v1	medwmB549