CmoCh07G000660 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G000660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDNA-damage-repair/toleration protein DRT111
LocationCmo_Chr07 : 376609 .. 381828 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAATTCGTTATTAACACTTTTCCCTTTCATACTTCACACCTTTATACAACATTTTAATGTTCAACGTTTACCTGTGTGTGATCCTCTCTTTCTACTTCATCACTGACTCTCAAAGCCCTAATTCCGAGGACTCCCGAGTTTTGCAAATTTTGCTGTCCACCGTCAACTGGAAATTCCATTCTCCGATTCAGTTTGCATTTTGAAAATTCCGGTGTTCCAGAGATCCCAAGGACAGAAGACGAAGCTACGCTTACGATATGCTTGGTGGATTGTATGGAGACCTCCCTCCGCCTTCTTCGGCAGAGGAAGACAAGCCCAGCAATTCTACCGTCTGGTCGAGTAGTACAAAAATGGCGCCGCCTACCCTACGTAAACCATCTTCCGTCTTCGCGCCGCCAACTGTTCTCAGATCTCAAAGCAAAGTAAAACCAGCCACCTCGACGCACCCGAAGGCTTCGGTGGAGCCATCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCGACAGTTATAGAAGAGTATGATCCAGCAAGGCCGAATGACTACGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGGCGTAGGCAAGAGGAGGAAGAGAGGGAAAAAAAAGAGCGAGAGGAGCGAGAAAGAGAATATTCCGATTCCAGGTTAAATATTTCAGGGGAGGAAGCTTGGAGAAGGCGTGCGGCGAAGAGTGGGGCAGTTCCGAGATCGCCATCACCACCAAGTACCGGAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGTGGGTTGGGAGTTGGGGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGTTGGAAAGAGGGGCAAGGGCTCGGGAAGCAGGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACGGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACATCAACGGGCTACCCACTCGGGTTCTCATGCTCAGAAACATGGTACGATGTTGTAGACTTCTGACATTTTGTTGATTTGAAATGAATTTGAAATAGCAGAGCTTGTTTCCGGGGCATTAGAGTTCGAGCGGTTTTTTCTTTTTTCTCAAATTCCTATTCAAATATTACGAATCTTTAGTTAGATTAGAGCAATCTAGAAAGTTTTACCGTAACTTATTATATTATATCTTCATCCTTTATGCAGTCTGTAGGATAGTTGCGAACGCCATTATATCACGCGATTCTTCTCTTAATCTATCGTTAAAATGCATGCACTTTAGAAAAATCTTGGTTAGCCACAACTGGACGAAAGTCCAATTCCTAACTCTTTTTTTTTTTTACCTTTTAACTGCTTGCCAAATGATATACGCTGACCTATTTGCAATGTTAGACCACTACGGAGAATGGATTCTTAACTAGGCAGTAAGGCTATTATCTGCCAACCACCATTCTTATCAGCCGATCTCTCAAAAAAAAAAAAAATTTAATATCTGAAAGCTTTCTTTCACTGCACTACGGTACTTATCATAAGGAATAAGATATGGACTAAACAATCCATCGCTGCATATAGATTTATGCTCGTGTGGGAAATTGTCGAGGGATAAACAATAGATTTCAGTTTATTAGTCCATGTGAAGATCAATTAAAAAGCAGAGAACTTGCAAAAACTTAATCAAAACTTACCACCTTTACTCATCTGGTTCTGTATAGAATAAGGCATTCATCAATCTTACTTATTTTGCTAGATCATTTTAAGTTTTAAGTTTATTAGAAAAGAGTTGCATATCAGAGATTAGATAGAGATTTCCATATTCATCATACCCACGGTGTCCCTCATGTTGCTTGGGGTCCCCTCCTTATGTAACGACCTTTCATACTACCTGACACCCTCTATCACATTTATTCTCCCTAGCTCTCTTTCTCGTAGAAATATTCTTAATTGGTGCTCAGGGTTCTTGAGAGAAGGTTTGGAGCACTACAGAGTTTGTAAAAGGTGATGCCCTAAGGGGAGAAATTTGAAAATTTCCTGCGAGGGAAGTATGGGAGAAATGCTTAGTTGTTTTAGCCAGCTGGAATGTTGCCACATGGCCACCAGATGATGGAGGCTTGAAATTGGGCATTTTAAGGAAGAGAAGTGAGGTAATACTACTGAGAGCTCTGGACATATTGTGGAGAAAGTTCTGAGATGCACAATAAGCTGGTTACTAGCACATACGGAAATGAAGAAGGAAGGAATGAAAATAGACAGTTTTCTCGAGCTAGGTAATTTAGTTGTTTTCAAAGCCTTTGTGTGACCACTATCAAATTCTGAGCAAAAAAGCTGGGAAGTGAAAAAAGAACTTCTTTCTAAGCTGATATTTGGATAGGAAATTGCTGACTATATCGCAGCTTTCCTTGGGTTTCATTGGTTCTTTCTGGTTATTTGCCAAAAAGAAATCTAACTGAGAAATTGAAGAGGCTAGAGGCCTGGTTCAAATTCTAGATGATGTACAACCTTGTGGCGAGGATAAAAGGATTTGGCGAATAATCCCTCAAGTCAAATTGTTTGTAAAATTACTGGTAAAAGAGCTCATTGGACCACAGTCAGGGAAAAGAAGGAAAAATCTTTTTGTCAAGCCATTGTTTAGGCATTATGAAATTGAAGATTATTAGGAGAAAAACATACGAGTTAAAAAGAAATAGGGATTAGAGTTTGAACTTCTTCACGTGTTTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGCGTGGGGTAACAGATGTTTACCTGGATGGTTTCCTTCCTACTTGCATACTTTCTTCAATTGCCCCATTCCTCAGTTTTGTTCTACGATCACAAAAACAAGAGAGAAGAAAAGAAGCTTTTTTAATGATTAGGGGACAAGCTCATATTTTTGTTGGCACTGAGCATTTTGGGCATGAAGGTAAAGAGGTCCTAGGTACTTCTAGAGCATGAGTTGATTTCAAGTTTCCTATAAGAGGTAAGGTACTAGCTTTCTGGTTTTCTTATGGCTCTTATTTGTGTAACAGTGTTATTCCTTTTAACAACTACAGCTCAAATTCCCTCCTATCCAATTGGAGATTTTTTTTGTAACTAATACGGCGGAGCTTGTAAATATAGAAAAAAAAAACAATATATATATTTTAGATTATTACTTGGTTTAAGAATCGTCTAATACATGTTTGATCCCTCCCTCACTTTACCCTAGCAACTACTTATATAAATGTGAATCTAGGTTGTGTTTTAATGTCATTACTATCATAGTGGGTTAATCTTTTAATCTTTCATTTATGTTTGGGTTGCTTTTGAGTGTGGTATTTTCTTCTGTTTAATTGTAATGGAATGTAAGACCTATAATTGCCTGTAATATGAGGATCCATCATTATGTTAAAAAAAGTATCTGACCTGAAGGATTATTTTCTGTTTCACTAAGACTCAATTTCAGTTGATAGATCACGTCACATGTGAATATGGCACACTGTATTTATGTATAAAGCCAACAAACAATTTTATCCTCGAGGATATCTAAATGATAAGTTTTGACGATTGAACTTGAAGCATTTTTCATTTTAAAGAAAACCTTACACTTTTCTTCAGACGTTAAAAGCATATAATTTGTGGTTTTTCCTGAAGAGAATGATGAGAATGGCTGCCTTGTTTAATATTTCTTGAAGGTGGGTCCTGGTGAGGTGGATGATGAGCTAGAGGAGGAAGTAGGATCAGAGTGTGCGAAGTATGGGACAGTAACACGGGTTCTAATATTTGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGTATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGGGTAGTTCGAGCTACATTTTATGATGAGGAAAGGTTCGGTAAGAATGAATTAGCTCCAATGCCCGGTGAAGTCCCTGGATTTACATGAAACCCAAGAATTGAAGAACGCGAGACATTCTCATTCTGCAGTGATGAAGCTATGATCAATTTGGATTGGATTGTGCATTAACTTTCCTGTTGTCAAGAGATTTGCCCACGATGTCGTTGACTGAATGAAGCCCAGGAATGGAATTGTTGAACTGATCTTATTAGCTAGTGCAGATTGTTCTAGTCAAATAGCTACAAAGAAGCATATTTACCTGCTCCTGTTAATTGAATACAAGATTCTAATTTCTATGGCATTTGGTCAAAAATTGGGTCTCTTTGCAGGCATTATGAGAATCTCTTGTTTATCTTGGGACTTGACTGAAGGAAGTATTATGCACATGGTAAAGAGAAAAACCATCCAAGATAAACCTTTGGCGAGTTCCATTTTTGTTGATTTTCAGATCGTTAAGTAAAATTTTGTAGTGTTCAAGCGTCTGTGTCTTAATAAAAGCCTGGCAAGTTTATCTTGTTTGCTTTCTCTTCGCTTCGTTGGTTGTCTTGAACAATAGTTTCCACTAAGACTCGTTTGATTTGACTGATACAGAGAGACTAACAACTCTATTTGCATGTACAGCACGTTGTGATGAAGATGGGCGTTCTGTTGGGCTGCAGGTGGATTATGATTGGGCTTTTACAGTAATTTTAGG

mRNA sequence

TGAATTCGTTATTAACACTTTTCCCTTTCATACTTCACACCTTTATACAACATTTTAATGTTCAACGTTTACCTGTGTGTGATCCTCTCTTTCTACTTCATCACTGACTCTCAAAGCCCTAATTCCGAGGACTCCCGAGTTTTGCAAATTTTGCTGTCCACCGTCAACTGGAAATTCCATTCTCCGATTCAGTTTGCATTTTGAAAATTCCGGTGTTCCAGAGATCCCAAGGACAGAAGACGAAGCTACGCTTACGATATGCTTGGTGGATTGTATGGAGACCTCCCTCCGCCTTCTTCGGCAGAGGAAGACAAGCCCAGCAATTCTACCGTCTGGTCGAGTAGTACAAAAATGGCGCCGCCTACCCTACGTAAACCATCTTCCGTCTTCGCGCCGCCAACTGTTCTCAGATCTCAAAGCAAAGTAAAACCAGCCACCTCGACGCACCCGAAGGCTTCGGTGGAGCCATCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCGACAGTTATAGAAGAGTATGATCCAGCAAGGCCGAATGACTACGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGGCGTAGGCAAGAGGAGGAAGAGAGGGAAAAAAAAGAGCGAGAGGAGCGAGAAAGAGAATATTCCGATTCCAGGTTAAATATTTCAGGGGAGGAAGCTTGGAGAAGGCGTGCGGCGAAGAGTGGGGCAGTTCCGAGATCGCCATCACCACCAAGTACCGGAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGTGGGTTGGGAGTTGGGGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGTTGGAAAGAGGGGCAAGGGCTCGGGAAGCAGGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACGGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACATCAACGGGCTACCCACTCGGGTTCTCATGCTCAGAAACATGGTGGGTCCTGGTGAGGTGGATGATGAGCTAGAGGAGGAAGTAGGATCAGAGTGTGCGAAGTATGGGACAGTAACACGGGTTCTAATATTTGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGTATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGGGTAGTTCGAGCTACATTTTATGATGAGGAAAGGTTCGGTAAGAATGAATTAGCTCCAATGCCCGGTGAAGTCCCTGGATTTACATGAAACCCAAGAATTGAAGAACGCGAGACATTCTCATTCTGCAGTGATGAAGCTATGATCAATTTGGATTGGATTGTGCATTAACTTTCCTGTTGTCAAGAGATTTGCCCACGATGTCGTTGACTGAATGAAGCCCAGGAATGGAATTGTTGAACTGATCTTATTAGCTAGTGCAGATTGTTCTAGTCAAATAGCTACAAAGAAGCATATTTACCTGCTCCTGTTAATTGAATACAAGATTCTAATTTCTATGGCATTTGGTCAAAAATTGGGTCTCTTTGCAGGCATTATGAGAATCTCTTGTTTATCTTGGGACTTGACTGAAGGAAGTATTATGCACATGGTAAAGAGAAAAACCATCCAAGATAAACCTTTGGCGAGTTCCATTTTTGTTGATTTTCAGATCGTTAAGTAAAATTTTGTAGTGTTCAAGCGTCTGTGTCTTAATAAAAGCCTGGCAAGTTTATCTTGTTTGCTTTCTCTTCGCTTCGTTGGTTGTCTTGAACAATAGTTTCCACTAAGACTCGTTTGATTTGACTGATACAGAGAGACTAACAACTCTATTTGCATGTACAGCACGTTGTGATGAAGATGGGCGTTCTGTTGGGCTGCAGGTGGATTATGATTGGGCTTTTACAGTAATTTTAGG

Coding sequence (CDS)

ATGCTTGGTGGATTGTATGGAGACCTCCCTCCGCCTTCTTCGGCAGAGGAAGACAAGCCCAGCAATTCTACCGTCTGGTCGAGTAGTACAAAAATGGCGCCGCCTACCCTACGTAAACCATCTTCCGTCTTCGCGCCGCCAACTGTTCTCAGATCTCAAAGCAAAGTAAAACCAGCCACCTCGACGCACCCGAAGGCTTCGGTGGAGCCATCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCGACAGTTATAGAAGAGTATGATCCAGCAAGGCCGAATGACTACGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGGCGTAGGCAAGAGGAGGAAGAGAGGGAAAAAAAAGAGCGAGAGGAGCGAGAAAGAGAATATTCCGATTCCAGGTTAAATATTTCAGGGGAGGAAGCTTGGAGAAGGCGTGCGGCGAAGAGTGGGGCAGTTCCGAGATCGCCATCACCACCAAGTACCGGAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGTGGGTTGGGAGTTGGGGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGTTGGAAAGAGGGGCAAGGGCTCGGGAAGCAGGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACGGACTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACATCAACGGGCTACCCACTCGGGTTCTCATGCTCAGAAACATGGTGGGTCCTGGTGAGGTGGATGATGAGCTAGAGGAGGAAGTAGGATCAGAGTGTGCGAAGTATGGGACAGTAACACGGGTTCTAATATTTGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGTATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGGGTAGTTCGAGCTACATTTTATGATGAGGAAAGGTTCGGTAAGAATGAATTAGCTCCAATGCCCGGTGAAGTCCCTGGATTTACATGA
BLAST of CmoCh07G000660 vs. Swiss-Prot
Match: DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=1 SV=2)

HSP 1 Score: 495.0 bits (1273), Expect = 7.3e-139
Identity = 282/387 (72.87%), Postives = 313/387 (80.88%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60
           MLGGLYGDLPPP+  E+   ++S+VWSSSTKMAPPTLRKP +   P T+LR  +K KP  
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIV 60

Query: 61  ST--HPKASVEPSQPILAEAIT-----QPALVAVTSTVIEEYDPARPNDYEEYRVEKKRK 120
           S    P      SQ +L  A       QPALV VTS+VIEEYDPARPNDYEEY+ EKKRK
Sbjct: 61  SAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKKRK 120

Query: 121 AMEAEMRKELERRRQEEEEREKKEREEREREYS-----DSRLNISGEEAWRRRAAKSGAV 180
           A EAEM++E+++RRQE+EER+K+EREERE+E        SRLNISGEEAW+RRAA SG  
Sbjct: 121 ATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAMSGGG 180

Query: 181 P----RSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 240
                RS SPP   DGFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGI
Sbjct: 181 SGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGI 240

Query: 241 TTPLMAKKTDLRAGVIVNANDTKS---EKKV-KSVNINGLPTRVLMLRNMVGPGEVDDEL 300
           TTPLMAKKTD RAGVIVNA++ KS   EKKV KSVNING PTRVL+LRNMVGPG+VDDEL
Sbjct: 241 TTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQVDDEL 300

Query: 301 EEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGR 360
           E+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R EETTKALVDLDGRYFGGR
Sbjct: 301 EDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGR 360

Query: 361 VVRATFYDEERFGKNELAPMPGEVPGF 368
            VRATFYDEE+F KNELAP+PGE+PG+
Sbjct: 361 TVRATFYDEEKFSKNELAPVPGEIPGY 387

BLAST of CmoCh07G000660 vs. Swiss-Prot
Match: SPF45_HUMAN (Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.3e-34
Identity = 144/412 (34.95%), Postives = 201/412 (48.79%), Query Frame = 1

Query: 5   LYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLR--------------KPSSVFAPPTVL 64
           LY DL       E   S +  WS + K+    L+              K S+V AP   L
Sbjct: 3   LYDDL-----GVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 62

Query: 65  R--SQSKVKPATSTHPKASVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRV 124
           +    S  +    T P  +     P+ +       L+ +     +EYDP  PN   +Y  
Sbjct: 63  KRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLA----DEYDPMFPN---DYEK 122

Query: 125 EKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----REREYSDSRLNISGEEAWRRRAA 184
             KR+  E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+ 
Sbjct: 123 VVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSM 182

Query: 185 KSGAV------------------------PRSPS-----PPSTGDGFSIGKSETG---GL 244
              A+                        PRS S     PP   +     +S TG     
Sbjct: 183 GGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSF 242

Query: 245 GVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKK 304
               GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ +  
Sbjct: 243 LANMGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDAS 302

Query: 305 VKS-----VNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPN 359
            KS       I   PT+V++LRNMVG GEVD++LE E   EC KYG V + +IFEI  P 
Sbjct: 303 KKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PG 362

BLAST of CmoCh07G000660 vs. Swiss-Prot
Match: SPF45_MOUSE (Splicing factor 45 OS=Mus musculus GN=Rbm17 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 145/416 (34.86%), Postives = 202/416 (48.56%), Query Frame = 1

Query: 5   LYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLR--------------KPSSVFAPPTVL 64
           LY DL       E   S +  WS + K+    L+              K S+V AP   L
Sbjct: 3   LYDDL-----GVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 62

Query: 65  R--SQSKVKPATSTHPKASVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRV 124
           +    S  +    T P  +     P+ +       L+ +     +EYDP  PN   +Y  
Sbjct: 63  KRGGSSDDRQIADTPPHVAAGLKDPVPSGFSAGEVLIPLA----DEYDPMFPN---DYEK 122

Query: 125 EKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----REREYSDSRLNISGEEAWRRRAA 184
             KR+  E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+ 
Sbjct: 123 VVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSM 182

Query: 185 KSGAV------------------------PRSPS-----PPSTGDGFSIGKSETG---GL 244
              A+                        PRS S     PP   +     +S TG     
Sbjct: 183 GGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSF 242

Query: 245 GVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTK---- 304
               GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+    
Sbjct: 243 LANMGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEA 302

Query: 305 --SEKKVKS---VNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEI 359
             + KK  S     I   PT+V++LRNMVG GEVD++LE E   EC KYG V + +IFEI
Sbjct: 303 QDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI 362

BLAST of CmoCh07G000660 vs. Swiss-Prot
Match: PUF60_RAT (Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus GN=Puf60 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-17
Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 1

Query: 264 VLMLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERS 323
           V++LRNMV P ++DD+LE EV  EC K+G V RV+I++  +      E  V+IFV+F  +
Sbjct: 468 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMA 527

Query: 324 EETTKALVDLDGRYFGGRVVRATFYDEERFGKNELA 359
            ET KA+  L+GR+FGGR V A  YD+ERF  ++L+
Sbjct: 528 SETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563

BLAST of CmoCh07G000660 vs. Swiss-Prot
Match: PUF60_MOUSE (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus GN=Puf60 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-17
Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 1

Query: 264 VLMLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERS 323
           V++LRNMV P ++DD+LE EV  EC K+G V RV+I++  +      E  V+IFV+F  +
Sbjct: 468 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMA 527

Query: 324 EETTKALVDLDGRYFGGRVVRATFYDEERFGKNELA 359
            ET KA+  L+GR+FGGR V A  YD+ERF  ++L+
Sbjct: 528 SETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563

BLAST of CmoCh07G000660 vs. TrEMBL
Match: A0A0A0KP45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525420 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 1.9e-186
Identity = 353/372 (94.89%), Postives = 361/372 (97.04%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  STHPKASV----EPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK SV    E SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAVPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERERE+SDSR+NISGEEAWRRRAAKSGA+PRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF KNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 369
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

BLAST of CmoCh07G000660 vs. TrEMBL
Match: W9RFT6_9ROSA (DNA-damage-repair/toleration protein OS=Morus notabilis GN=L484_026016 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.5e-162
Identity = 311/377 (82.49%), Postives = 338/377 (89.66%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPT-VLRSQSKVKPA 60
           MLGGLYGDLPPPSSA+E+KPSNSTVWS+STKMAPPTLRKP+SVFAPP  +L++Q+K KP 
Sbjct: 1   MLGGLYGDLPPPSSADEEKPSNSTVWSTSTKMAPPTLRKPASVFAPPQMILKTQNKQKPG 60

Query: 61  TSTHPKASVEPSQPILA----EAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAM 120
            S   KA   P+  +L     E + QPALV VTSTV+EEYDPARPNDYE+YR EKKRK M
Sbjct: 61  NSAQLKAVASPAVALLPTVVPEPVAQPALVGVTSTVLEEYDPARPNDYEDYRREKKRKLM 120

Query: 121 EAEMRKELERRRQEEEEREKKEREEREREYS-----DSRLNISGEEAWRRRAAKSGAVPR 180
           E EMRKELERRRQEEEERE++E++ERER+       DSRLNISGEEAWRRRAA SGA+PR
Sbjct: 121 EVEMRKELERRRQEEEERERREKQERERQRERDYGDDSRLNISGEEAWRRRAAMSGALPR 180

Query: 181 SPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240
           SPSPPS+GDGF IGKSETGGLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA
Sbjct: 181 SPSPPSSGDGFIIGKSETGGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240

Query: 241 KKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAK 300
           KKTD RAGVIVNA++ K EKKVKSVN+NG PTRVL+LRNMVGPGEVDDELE+EVGSECAK
Sbjct: 241 KKTDRRAGVIVNASEAKPEKKVKSVNLNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAK 300

Query: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEE 360
           YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGR+FGGRVVRATFYDEE
Sbjct: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRFFGGRVVRATFYDEE 360

Query: 361 RFGKNELAPMPGEVPGF 368
           RF KNELAPMPGEVPGF
Sbjct: 361 RFSKNELAPMPGEVPGF 377

BLAST of CmoCh07G000660 vs. TrEMBL
Match: M5WFQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007087mg PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 5.2e-160
Identity = 306/382 (80.10%), Postives = 342/382 (89.53%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPP-TVLRSQSKVKPA 60
           MLGGLYGDLPPPSSAEE+KPSN+TVWSSSTKMAP TLRKP+SVFAPP T+L+SQ+K KP+
Sbjct: 1   MLGGLYGDLPPPSSAEEEKPSNTTVWSSSTKMAPQTLRKPASVFAPPQTILKSQNKPKPS 60

Query: 61  TSTHPKASVEP--SQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAMEA 120
               PK +  P  +  ++   + QPALV VTSTV+EEYDPARPNDYEEY+ E+K+KAMEA
Sbjct: 61  NLAQPKITASPVIATSVIQNDMVQPALVGVTSTVLEEYDPARPNDYEEYKRERKKKAMEA 120

Query: 121 EMRKELERRRQEEEEREKKEREERERE----YSDSRLNISGEEAWRRRAAKSG------- 180
           EMR+EL+RRRQEEEE+E++EREERERE    + DSRLNISGEEAWRRRAA SG       
Sbjct: 121 EMRRELDRRRQEEEEKERREREERERERERDFGDSRLNISGEEAWRRRAAMSGGAVPAMP 180

Query: 181 AVPRSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 240
           A+PRSPSPP+ GDGF+IGKSE+GGLG+GAGGQMTAAQRMMAKMGWK+GQGLGKQEQGITT
Sbjct: 181 AIPRSPSPPNNGDGFTIGKSESGGLGLGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITT 240

Query: 241 PLMAKKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGS 300
           PLMAKKTD RAGVIVNA++TK EKK KSV++NG PTRVL+LRNMVGPGEVDDELE+EV S
Sbjct: 241 PLMAKKTDRRAGVIVNASETKPEKKAKSVSLNGPPTRVLLLRNMVGPGEVDDELEDEVAS 300

Query: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATF 360
           ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRA+F
Sbjct: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRASF 360

Query: 361 YDEERFGKNELAPMPGEVPGFT 369
           YDEERFG NELAPMPGE+PGFT
Sbjct: 361 YDEERFGNNELAPMPGEIPGFT 382

BLAST of CmoCh07G000660 vs. TrEMBL
Match: F6HLX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04720 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 5.9e-156
Identity = 307/384 (79.95%), Postives = 338/384 (88.02%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPP-TVLRSQ-SKVKP 60
           MLGGLYGDLPPPSSA+EDKP+NS+VWSSS KMAP  LRKPSSVFAPP +VL++Q ++ KP
Sbjct: 1   MLGGLYGDLPPPSSADEDKPTNSSVWSSSAKMAPAALRKPSSVFAPPQSVLKTQHAQAKP 60

Query: 61  ATSTH----------PKASVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRV 120
            T             P  SV P++   + +  QPALV VTS+V+EEYDPARPNDYE+YR 
Sbjct: 61  KTLNSSKILISPGLAPSPSVLPNEGARSPSF-QPALVGVTSSVVEEYDPARPNDYEDYRR 120

Query: 121 EKKRKAMEAEMRKELERRRQEEEEREKKERE----EREREYSDSRLNISGEEAWRRRAAK 180
           E+KRKAMEAEM++ELERRRQEEEERE++ RE    EREREY DSRLNISGEEAWRRRAA 
Sbjct: 121 ERKRKAMEAEMKRELERRRQEEEERERERREREAAEREREYGDSRLNISGEEAWRRRAAM 180

Query: 181 SGAVPRSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 240
           SGAVPRSPSPP++GDGF+IGKSET GLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI
Sbjct: 181 SGAVPRSPSPPTSGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 240

Query: 241 TTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEV 300
           TTPLMAKKTD RAGVIVNA+++K EKKVKSVN N  PTRVL+LRNMVGPGEVDDELE+EV
Sbjct: 241 TTPLMAKKTDRRAGVIVNASESKPEKKVKSVNFNSPPTRVLLLRNMVGPGEVDDELEDEV 300

Query: 301 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRA 360
           GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGR+FGGRVV A
Sbjct: 301 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRFFGGRVVHA 360

Query: 361 TFYDEERFGKNELAPMPGEVPGFT 369
           TFYDE+RF KNELAPMPGE+PGFT
Sbjct: 361 TFYDEDRFSKNELAPMPGEIPGFT 383

BLAST of CmoCh07G000660 vs. TrEMBL
Match: A0A0L9TME2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g131800 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 2.8e-153
Identity = 301/373 (80.70%), Postives = 330/373 (88.47%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPP-TVLRSQSKVKPA 60
           MLGGLYGDLPPPSSAEED      VWSSSTKMAP TLRKP+S+FAPP T+LR+Q K KP 
Sbjct: 1   MLGGLYGDLPPPSSAEEDNKPTPNVWSSSTKMAPATLRKPASLFAPPQTLLRTQPKPKPV 60

Query: 61  TSTHPKASVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAMEAEM 120
            + + KA + P+     +   QPALV V STV+EEYDPARPNDYEEYR ++KRKA EAEM
Sbjct: 61  VA-NTKALLSPTPAPPPDDALQPALVGVQSTVLEEYDPARPNDYEEYRRDRKRKAREAEM 120

Query: 121 RKELERRRQEEE--EREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAVPRSPSPPST 180
            +ELERRRQEEE  ERE+++  ERER+YS+SRLN+SGEEAWRRRAA SGAVPRSPSPP T
Sbjct: 121 LRELERRRQEEEDEEREREKERERERDYSESRLNVSGEEAWRRRAAMSGAVPRSPSPPPT 180

Query: 181 G--DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDL 240
           G  DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTD 
Sbjct: 181 GNSDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDR 240

Query: 241 RAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVT 300
           RAGVIVNA+D  + KKVKSVN NG+PT+VL+LRNMVGPGEVDDELE+EVGSECAKYGTVT
Sbjct: 241 RAGVIVNASD--NSKKVKSVNFNGVPTKVLLLRNMVGPGEVDDELEDEVGSECAKYGTVT 300

Query: 301 RVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKN 360
           RVLIFEITEPNFP DEAVRIFVQFERSEETTKAL+DLDGRYFGGRVVRA+FYDEE+FGKN
Sbjct: 301 RVLIFEITEPNFPTDEAVRIFVQFERSEETTKALIDLDGRYFGGRVVRASFYDEEKFGKN 360

Query: 361 ELAPMPGEVPGFT 369
           ELAPMPGE+PGFT
Sbjct: 361 ELAPMPGEIPGFT 370

BLAST of CmoCh07G000660 vs. TAIR10
Match: AT1G30480.1 (AT1G30480.1 D111/G-patch domain-containing protein)

HSP 1 Score: 495.0 bits (1273), Expect = 4.1e-140
Identity = 282/387 (72.87%), Postives = 313/387 (80.88%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60
           MLGGLYGDLPPP+  E+   ++S+VWSSSTKMAPPTLRKP +   P T+LR  +K KP  
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIV 60

Query: 61  ST--HPKASVEPSQPILAEAIT-----QPALVAVTSTVIEEYDPARPNDYEEYRVEKKRK 120
           S    P      SQ +L  A       QPALV VTS+VIEEYDPARPNDYEEY+ EKKRK
Sbjct: 61  SAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKKRK 120

Query: 121 AMEAEMRKELERRRQEEEEREKKEREEREREYS-----DSRLNISGEEAWRRRAAKSGAV 180
           A EAEM++E+++RRQE+EER+K+EREERE+E        SRLNISGEEAW+RRAA SG  
Sbjct: 121 ATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAMSGGG 180

Query: 181 P----RSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 240
                RS SPP   DGFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGI
Sbjct: 181 SGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGI 240

Query: 241 TTPLMAKKTDLRAGVIVNANDTKS---EKKV-KSVNINGLPTRVLMLRNMVGPGEVDDEL 300
           TTPLMAKKTD RAGVIVNA++ KS   EKKV KSVNING PTRVL+LRNMVGPG+VDDEL
Sbjct: 241 TTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQVDDEL 300

Query: 301 EEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGR 360
           E+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R EETTKALVDLDGRYFGGR
Sbjct: 301 EDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGR 360

Query: 361 VVRATFYDEERFGKNELAPMPGEVPGF 368
            VRATFYDEE+F KNELAP+PGE+PG+
Sbjct: 361 TVRATFYDEEKFSKNELAPVPGEIPGY 387

BLAST of CmoCh07G000660 vs. TAIR10
Match: AT4G36690.1 (AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 1

Query: 262 TRVLMLRNMVGPGEVDDELE-----EEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 321
           T V+ L  +V   E+ D+ E     E++  E  K+G +T V+I   +    PV    ++F
Sbjct: 471 TTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVF 530

Query: 322 VQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKNE 357
           +++  ++ +T+A   ++GR FGG  V A +Y E++F + +
Sbjct: 531 LKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGD 570

BLAST of CmoCh07G000660 vs. NCBI nr
Match: gi|449433648|ref|XP_004134609.1| (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis sativus])

HSP 1 Score: 659.8 bits (1701), Expect = 2.7e-186
Identity = 353/372 (94.89%), Postives = 361/372 (97.04%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  STHPKASV----EPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK SV    E SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAVPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERERE+SDSR+NISGEEAWRRRAAKSGA+PRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF KNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 369
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

BLAST of CmoCh07G000660 vs. NCBI nr
Match: gi|659078114|ref|XP_008439555.1| (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis melo])

HSP 1 Score: 655.6 bits (1690), Expect = 5.1e-185
Identity = 351/372 (94.35%), Postives = 360/372 (96.77%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQ+K+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60

Query: 61  STHPKASV----EPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
            THPKASV    E SQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  LTHPKASVSTQVEASQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAVPRSPSPPS 180
           AEMRKELERRRQEEEEREKKER+ERERE+SDSR+NISGEEAWRRRAAKSGA+PRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKERDEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKK KSVN NGLPTRVL+LRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF KNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 369
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

BLAST of CmoCh07G000660 vs. NCBI nr
Match: gi|1009105644|ref|XP_015883069.1| (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 595.5 bits (1534), Expect = 6.3e-167
Identity = 320/382 (83.77%), Postives = 344/382 (90.05%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPP-TVLRSQSKVKPA 60
           MLGGLYGDLPPP+SA+E+KPSNSTVWSSSTKMAPPTLRKPSSVFAPP TVL+SQSK K  
Sbjct: 1   MLGGLYGDLPPPTSADEEKPSNSTVWSSSTKMAPPTLRKPSSVFAPPQTVLKSQSKPKSV 60

Query: 61  TSTHPKAS-----VEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKA 120
            S H   S     V P   ++ + + QPALV +TSTV+EEYDP RPNDYEEYR E+KRKA
Sbjct: 61  NSVHQARSTTSPAVAPLPAVVPDDVAQPALVGITSTVMEEYDPERPNDYEEYRRERKRKA 120

Query: 121 MEAEMRKELERRRQEEEE--------REKKEREEREREYSDSRLNISGEEAWRRRAAKSG 180
           MEAEMR+ELERRRQEEEE        RE++EREERER+YS+SRLNISGEEAW+RRAA SG
Sbjct: 121 MEAEMRRELERRRQEEEEKERERERERERREREERERDYSESRLNISGEEAWKRRAAMSG 180

Query: 181 AVPRSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 240
           AVPRSPSPPS GDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT
Sbjct: 181 AVPRSPSPPSNGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 240

Query: 241 PLMAKKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGS 300
           PLMAKKTD RAGVIVNA+DTK EKKVKS N NG+PTRVL+LRNMVGPGEVDDELE+EVGS
Sbjct: 241 PLMAKKTDRRAGVIVNASDTKPEKKVKSANFNGVPTRVLLLRNMVGPGEVDDELEDEVGS 300

Query: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATF 360
           ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGRYFGGRVVRA+F
Sbjct: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRYFGGRVVRASF 360

Query: 361 YDEERFGKNELAPMPGEVPGFT 369
           YDEERFGKNELAPMPGE+PGFT
Sbjct: 361 YDEERFGKNELAPMPGEIPGFT 382

BLAST of CmoCh07G000660 vs. NCBI nr
Match: gi|703106737|ref|XP_010098574.1| (DNA-damage-repair/toleration protein [Morus notabilis])

HSP 1 Score: 577.8 bits (1488), Expect = 1.4e-161
Identity = 311/377 (82.49%), Postives = 338/377 (89.66%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPT-VLRSQSKVKPA 60
           MLGGLYGDLPPPSSA+E+KPSNSTVWS+STKMAPPTLRKP+SVFAPP  +L++Q+K KP 
Sbjct: 1   MLGGLYGDLPPPSSADEEKPSNSTVWSTSTKMAPPTLRKPASVFAPPQMILKTQNKQKPG 60

Query: 61  TSTHPKASVEPSQPILA----EAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAM 120
            S   KA   P+  +L     E + QPALV VTSTV+EEYDPARPNDYE+YR EKKRK M
Sbjct: 61  NSAQLKAVASPAVALLPTVVPEPVAQPALVGVTSTVLEEYDPARPNDYEDYRREKKRKLM 120

Query: 121 EAEMRKELERRRQEEEEREKKEREEREREYS-----DSRLNISGEEAWRRRAAKSGAVPR 180
           E EMRKELERRRQEEEERE++E++ERER+       DSRLNISGEEAWRRRAA SGA+PR
Sbjct: 121 EVEMRKELERRRQEEEERERREKQERERQRERDYGDDSRLNISGEEAWRRRAAMSGALPR 180

Query: 181 SPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240
           SPSPPS+GDGF IGKSETGGLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA
Sbjct: 181 SPSPPSSGDGFIIGKSETGGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240

Query: 241 KKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAK 300
           KKTD RAGVIVNA++ K EKKVKSVN+NG PTRVL+LRNMVGPGEVDDELE+EVGSECAK
Sbjct: 241 KKTDRRAGVIVNASEAKPEKKVKSVNLNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAK 300

Query: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEE 360
           YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGR+FGGRVVRATFYDEE
Sbjct: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRFFGGRVVRATFYDEE 360

Query: 361 RFGKNELAPMPGEVPGF 368
           RF KNELAPMPGEVPGF
Sbjct: 361 RFSKNELAPMPGEVPGF 377

BLAST of CmoCh07G000660 vs. NCBI nr
Match: gi|595862568|ref|XP_007211423.1| (hypothetical protein PRUPE_ppa007087mg [Prunus persica])

HSP 1 Score: 572.0 bits (1473), Expect = 7.5e-160
Identity = 306/382 (80.10%), Postives = 342/382 (89.53%), Query Frame = 1

Query: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPP-TVLRSQSKVKPA 60
           MLGGLYGDLPPPSSAEE+KPSN+TVWSSSTKMAP TLRKP+SVFAPP T+L+SQ+K KP+
Sbjct: 1   MLGGLYGDLPPPSSAEEEKPSNTTVWSSSTKMAPQTLRKPASVFAPPQTILKSQNKPKPS 60

Query: 61  TSTHPKASVEP--SQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAMEA 120
               PK +  P  +  ++   + QPALV VTSTV+EEYDPARPNDYEEY+ E+K+KAMEA
Sbjct: 61  NLAQPKITASPVIATSVIQNDMVQPALVGVTSTVLEEYDPARPNDYEEYKRERKKKAMEA 120

Query: 121 EMRKELERRRQEEEEREKKEREERERE----YSDSRLNISGEEAWRRRAAKSG------- 180
           EMR+EL+RRRQEEEE+E++EREERERE    + DSRLNISGEEAWRRRAA SG       
Sbjct: 121 EMRRELDRRRQEEEEKERREREERERERERDFGDSRLNISGEEAWRRRAAMSGGAVPAMP 180

Query: 181 AVPRSPSPPSTGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 240
           A+PRSPSPP+ GDGF+IGKSE+GGLG+GAGGQMTAAQRMMAKMGWK+GQGLGKQEQGITT
Sbjct: 181 AIPRSPSPPNNGDGFTIGKSESGGLGLGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITT 240

Query: 241 PLMAKKTDLRAGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGS 300
           PLMAKKTD RAGVIVNA++TK EKK KSV++NG PTRVL+LRNMVGPGEVDDELE+EV S
Sbjct: 241 PLMAKKTDRRAGVIVNASETKPEKKAKSVSLNGPPTRVLLLRNMVGPGEVDDELEDEVAS 300

Query: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATF 360
           ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRA+F
Sbjct: 301 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRASF 360

Query: 361 YDEERFGKNELAPMPGEVPGFT 369
           YDEERFG NELAPMPGE+PGFT
Sbjct: 361 YDEERFGNNELAPMPGEIPGFT 382

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DR111_ARATH7.3e-13972.87DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thalia... [more]
SPF45_HUMAN8.3e-3434.95Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 SV=1[more]
SPF45_MOUSE2.0e-3234.86Splicing factor 45 OS=Mus musculus GN=Rbm17 PE=1 SV=1[more]
PUF60_RAT1.8e-1747.92Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus GN=Puf60 PE=2 SV=2[more]
PUF60_MOUSE1.8e-1747.92Poly(U)-binding-splicing factor PUF60 OS=Mus musculus GN=Puf60 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KP45_CUCSA1.9e-18694.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525420 PE=4 SV=1[more]
W9RFT6_9ROSA9.5e-16282.49DNA-damage-repair/toleration protein OS=Morus notabilis GN=L484_026016 PE=4 SV=1[more]
M5WFQ2_PRUPE5.2e-16080.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007087mg PE=4 SV=1[more]
F6HLX4_VITVI5.9e-15679.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04720 PE=4 SV=... [more]
A0A0L9TME2_PHAAN2.8e-15380.70Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g131800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G30480.14.1e-14072.87 D111/G-patch domain-containing protein[more]
AT4G36690.11.6e-0629.00 U2 snRNP auxilliary factor, large subunit, splicing factor[more]
Match NameE-valueIdentityDescription
gi|449433648|ref|XP_004134609.1|2.7e-18694.89PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis s... [more]
gi|659078114|ref|XP_008439555.1|5.1e-18594.35PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis m... [more]
gi|1009105644|ref|XP_015883069.1|6.3e-16783.77PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Ziziphus ... [more]
gi|703106737|ref|XP_010098574.1|1.4e-16182.49DNA-damage-repair/toleration protein [Morus notabilis][more]
gi|595862568|ref|XP_007211423.1|7.5e-16080.10hypothetical protein PRUPE_ppa007087mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR016967Splicing_factor_SPF45
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006312 mitotic recombination
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0043687 post-translational protein modification
biological_process GO:0010212 response to ionizing radiation
biological_process GO:0006281 DNA repair
biological_process GO:0043484 regulation of RNA splicing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000660.1CmoCh07G000660.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainPFAMPF01585G-patchcoord: 201..240
score: 1.0
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 196..242
score: 1.4
IPR000467G-patch domainPROFILEPS50174G_PATCHcoord: 198..244
score: 15
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 253..349
score: 10
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 264..345
score: 3.2
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 262..347
score: 1.2
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 265..351
score: 5.7
IPR016967Splicing factor, SPF45PIRPIRSF031066SPF45coord: 3..364
score: 2.8E
NoneNo IPR availableunknownCoilCoilcoord: 112..141
scor
NoneNo IPR availablePANTHERPTHR13288DNA-DAMAGE REPAIR PROTEIN DRT111coord: 1..359
score: 3.6E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G000660CmoCh03G014410Cucurbita moschata (Rifu)cmocmoB459