CsGy6G036190 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G036190
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	DNA-damage-repair/toleration protein DRT111, chloroplastic
Location	Chr6 : 31797614 .. 31801908 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCTTTTGACTACGTCAGTTTCTCTAATACTTAGCTATACGTTTGTTAATTCGTCTTTCTTCGTTAATTTAGTGTATTTCATACACATTTTTTTTCCGTTTTGATACTGTTTACCAATCCGTCACCATCCGTATTTTGCTGGGAAAACCCTATTTTTCTACTTCATCACTGTCACTCAAATCCCTAAATTTTGAGTACTCGAAAGTTTTGCAAATTTATCAAATTTTGCCGACCACCGTCGACTGGAAATTTCCTTCTTCGACTCTGTTCCCATCTTGAAATCTCCGATGTTCTAGATATTTCAAGGAGAGAAGACAAAAGCTAGGTGTACGGTATGCTTGGTGGATTGTACGGGGACCTTCCTCCGCCCTCTTCGGCTGAGGAAGATAAGCCAACAAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGGAAGCCATCGTCCGTATTCGCGCCACAGACCGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACCTCGACACACCCTAAGGTTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCTATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTGTAGAGGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGAGAACATTCTGATTCTAGGATAAATATTTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGAATTACCACTCCTCTGATGGCAAAAAAGACAGATTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAAGTGAAGAGTGTTAACTTCAACGGGCTACCTACTCGGGTTCTTCTTCTCAGAAACATGGTACGTCCATGTAGAATTCTGTTAATTTTAAATGAGTTTTAGGCAGCAGAGTTTGTTTTCGGGGCAAGAATTTTAGTAGTTCTTGCTCATTGCTCAGAAATTTCGCAATTCTTAGTTAGATTGGATAAAATAGTTGGGAAGTAGGCTGATATTTGGATGGGAAATTTCTGGTTATGTCATAGCTTTCCTCGGGTTTCATTGGCTCTTTCTGTTTATATCCCTAACCAATGTTTTTTTATGGAAGAAGTCTAACTGAGGTAATAGAGGAGGCAAGAGGCCCGATTCAAATTCTAGATGACCTACAACCTTTGTGGTAGGAAGGATAAAAGGATTTGAAGAATAAATCCTTCAGTCCTATTTTTAGTAAAATTTCTGGTAAAAGAGCTTGTTGGATCACAGACTGGAAGAAGGAAGCAAAAATCTCTTGGTTTAATGTTGCCAAACCATTGTTTAGGGATATAAACTCAAAGATATCAAAGATTACTAGGAAATGAAATTACAAGTTCTGAATAAATAGGTGTTTTGGTTTTTGGAAACTGTTCCTTTTCTCCTATTGTTTTATGGCCAGTTTCATCTTTGTTAAGGAAACTTTTGAATTCTCAGCTAAATTCTGAATTTTTTTTCTTCAGTGTCAAAAAACCTGTTAATCATATATATCCTTATTGTGAATCATATAAATCAACGTATTTTTTTCTTAGAAAAACAAAAGAACCAAGTGTTTCTTTGTGAAATATGAGAAGAACTAGTGAGTAGACAAACATAAAGTTCAAAAAATAGGAAACTGAATACGAAATCATTGTCAAACAGGATCTAAATGTTTCGGGTGTGATACTATTGGGGTTTCATGAAGTTAGTTGGTAAAGAGGTACTGGGTAGTACTACTAGAGTATGAGCTGTTTTCAAGCTTTAACGGAAGCTGTCATTTTCTATATTCTATTTTGTAAACTTCCATTTTGGTTATGAGTTACATTCAGCTTTTTTATTTGATCATAGGGGTTATTTGAACACCTTATGTGAGAATATTTACTCTCATGAAAGACCACTATTTGTAAACTGTACGTGGAGTTTCATGACAAATGTATGACAGATTGTGTAAATATGGTAGAAAAAACAAGATATATTTCAGATTATTATTATTTAACATAAGAATCTTGTTTTATATGGTTGAACCTTTCCCTCCCTGTATCCTAGCGAGTAGCGACTACTACATACAATTGTGAAGCTAGGTTATGTTTTAATTGTCACTAAACAATTTAGATGATAGATGTCACATAGTGGTTTAATATTCTAATCTTTCATTTGTGCTTATGATGCTTTGGAGATTTAGTAATTTCCGCTGTTTAATAATTTAACGGATTTTACATCCTTTAAGCGTTTGCATTAGGAGAGTTAGACAAGGTAATTGGGAGGTGTACCAGTGTATATAAACTGATTAGAGAGACTGTGAGAGGGAGAGAGCAGACCTCTTATCCTGCCACTTGTATGGGATACTTATCCTGAATAGAGGTTATGAAATTTCTACCATAAACACAGAATTTTCATTAACTAACAATAAAAGATTTTGGGCCGTTTGTTTTTAGGTGGCAAATATGAATGCTTCTCAGTGGTGTTCTCATCCCAAATTATTTACTGGGCTTTCTTTATAGGATATTTGTTGGAGTTAGGGAAGCTTTATATTCTCTCAGTTTTTAATTTCTCTCCCTTTTGAAATTTGTATCTTTGGAAAGTAGTCTAGAACAAAAAGGAAAAAACAGTATCAATCAAGATAGGGATTCATCATTATGTAAGAAGAGTATCAACTTGTAGGGATATTTCTTTATAACCCAGATCAATTTCAGTTTTGATAGACGTGATCACACGTGAGTATAGCATGCTCTATTTATGCATAATGCTAAGCGAGTGGTTTTATCTCCGAGGATATCTCAATGATCGAGCCTTTGATGAATTAAGCATTTTTTATATTGTAGAAAGGCACTGCATTTTTCTTCAGACGTCTAAAGCATCTAAACTTGTGATTTTTTCTGATGAGAATAATGAGAATGGCTGCCTTGTTTGATTTTTCTTGAAGGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGAGTTCTAATATTCGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACAAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGACGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGAAATCCACAAAATACACCAGAAAAAAGAAACGCCAAACATGCTCATTCTTGATTGATGAAGCTACGATTAATTTGGATTGGATTGTGCAATAACTTTCCTATTGTAAAGAGATTTTCTCACGATGTTGTTGACTGAATGAATGAAGATCAAGAATGGAATTGTTGAACTTGAAATTATCTTATTAACTAGTGCAGATTGTTCTAATCTAATAGTTGCTTGAAGATTCATGTTTCGTTGGCAGATTACCAAAAACTGGCTTTCGTTGCAGTCATTATGACAACATTTTTGTTTGTTTCTCGAGACTGGACTGAATGATGGTGCACTTGGTAAGAGACATTTTGACCATCCAAGATAAACCCCTTGACGAGTTCATTCTTTTCTTGTATTCATAGTTCTATTGGTTAATAAAAGCTTAGGAAGATTAGCTTATTTATTTAGTCCCAGATTCAATGATGTCTTGATTGATTAGTCTCAACCAAGATTGTAATATGGTTTTGTTGGTACAATAAGAGACTGACAGCATCTCTGTTTGAATAGCACAACAAGTTGATGAAGCTTTTAGATTGGCATTGTTTTGGGCTTCGAGTGGATTGTCATTGGGCTTTGACTGTAATTCTTGGAAAAATCCAGGACTTACTTTTATGGTTAAATAAAAAACAAAAGGTAAAGTTCGTAGTATTGCTAAAGTTTCTTTTTCATGTAATAAACGATAAAGTATCTTGCAGTAGCCATTTCTATATAAGTTTTTGTTAATAAAAAATATTTCTTTTA

mRNA sequence

TTTTTCTTTTGACTACGTCAGTTTCTCTAATACTTAGCTATACGTTTGTTAATTCGTCTTTCTTCGTTAATTTAGTGTATTTCATACACATTTTTTTTCCGTTTTGATACTGTTTACCAATCCGTCACCATCCGTATTTTGCTGGGAAAACCCTATTTTTCTACTTCATCACTGTCACTCAAATCCCTAAATTTTGAGTACTCGAAAGTTTTGCAAATTTATCAAATTTTGCCGACCACCGTCGACTGGAAATTTCCTTCTTCGACTCTGTTCCCATCTTGAAATCTCCGATGTTCTAGATATTTCAAGGAGAGAAGACAAAAGCTAGGTGTACGGTATGCTTGGTGGATTGTACGGGGACCTTCCTCCGCCCTCTTCGGCTGAGGAAGATAAGCCAACAAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGGAAGCCATCGTCCGTATTCGCGCCACAGACCGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACCTCGACACACCCTAAGGTTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCTATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTGTAGAGGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGAGAACATTCTGATTCTAGGATAAATATTTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGAATTACCACTCCTCTGATGGCAAAAAAGACAGATTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAAGTGAAGAGTGTTAACTTCAACGGGCTACCTACTCGGGTTCTTCTTCTCAGAAACATGGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGAGTTCTAATATTCGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACAAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGACGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGAAATCCACAAAATACACCAGAAAAAAGAAACGCCAAACATGCTCATTCTTGATTGATGAAGCTACGATTAATTTGGATTGGATTGTGCAATAACTTTCCTATTGTAAAGAGATTTTCTCACGATGTTGTTGACTGAATGAATGAAGATCAAGAATGGAATTGTTGAACTTGAAATTATCTTATTAACTAGTGCAGATTGTTCTAATCTAATAGTTGCTTGAAGATTCATGTTTCGTTGGCAGATTACCAAAAACTGGCTTTCGTTGCAGTCATTATGACAACATTTTTGTTTGTTTCTCGAGACTGGACTGAATGATGGTGCACTTGGTAAGAGACATTTTGACCATCCAAGATAAACCCCTTGACGAGTTCATTCTTTTCTTGTATTCATAGTTCTATTGGTTAATAAAAGCTTAGGAAGATTAGCTTATTTATTTAGTCCCAGATTCAATGATGTCTTGATTGATTAGTCTCAACCAAGATTGTAATATGGTTTTGTTGGTACAATAAGAGACTGACAGCATCTCTGTTTGAATAGCACAACAAGTTGATGAAGCTTTTAGATTGGCATTGTTTTGGGCTTCGAGTGGATTGTCATTGGGCTTTGACTGTAATTCTTGGAAAAATCCAGGACTTACTTTTATGGTTAAATAAAAAACAAAAGGTAAAGTTCGTAGTATTGCTAAAGTTTCTTTTTCATGTAATAAACGATAAAGTATCTTGCAGTAGCCATTTCTATATAAGTTTTTGTTAATAAAAAATATTTCTTTTA

Coding sequence (CDS)

ATGCTTGGTGGATTGTACGGGGACCTTCCTCCGCCCTCTTCGGCTGAGGAAGATAAGCCAACAAATTCTACCGTCTGGTCGAGCAGCACAAAGATGGCGCCTCCGACTCTTCGGAAGCCATCGTCCGTATTCGCGCCACAGACCGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACCTCGACACACCCTAAGGTTTCGGTGTCAACGCAGGTGGAGGCATCTCAGCCAATTCTGGCCGAGGCTATTACACAACCGGCATTGGTGGCTGTGACGTCTACGGTTGTAGAGGAGTATGATCCAGCGAGGCCGAATGACTATGAGGAGTATAGGGTGGAGAAGAAGAGGAAGGCTATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGAGAACATTCTGATTCTAGGATAAATATTTCGGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGGGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGGATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGGCTTGGGAAGCAAGAACAAGGAATTACCACTCCTCTGATGGCAAAAAAGACAGATTTGCGTGCTGGAGTAATTGTGAACGCTAATGATACGAAATCAGAGAAGAAAGTGAAGAGTGTTAACTTCAACGGGCTACCTACTCGGGTTCTTCTTCTCAGAAACATGGTTGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGAACAGTAACACGAGTTCTAATATTCGAGATTACAGAACCCAATTTTCCAGTGGACGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACAAAGGCTTTGGTTGATCTTGATGGTCGGTACTTTGGTGGAAGAGTGGTTCGAGCTACATTTTACGACGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGA

Protein sequence

MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGFT

Homology

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BLAST of CsGy6G036190 vs. NCBI nr
Match: XP_004134609.1 (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis sativus] >KGN49456.1 hypothetical protein Csa_6G525420 [Cucumis sativus])

HSP 1 Score: 520.8 bits (1340), Expect = 3.9e-144
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

[Close]

BLAST of CsGy6G036190 vs. NCBI nr
Match: XP_022146691.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia])

HSP 1 Score: 512.3 bits (1318), Expect = 1.4e-141
Identity = 337/372 (90.59%), Postives = 341/372 (91.67%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKM  XX  XXXXXXXXXXXXXXXXXXXX  
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPXXLRXXXXXXXXXXXXXXXXXXXXAT 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
                            ILAEAITQPALVAVTSTVVEEYDPARPNDY     XXXXXXXX
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

[Close]

BLAST of CsGy6G036190 vs. NCBI nr
Match: XP_023003194.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 509.6 bits (1311), Expect = 8.9e-141
Identity = 349/372 (93.82%), Postives = 354/372 (95.16%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
           XXXXXXXXXX       ILAEAITQPALVAVTSTV+EEYDPARPNDY        XXXXX
Sbjct: 61  XXXXXXXXXXPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVN NGLPTRVL+LRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF KNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

[Close]

BLAST of CsGy6G036190 vs. NCBI nr
Match: XP_022925977.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata] >XP_022925978.1 DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 2.2e-139
Identity = 327/372 (87.90%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKM      XXXXXXXXXXXXX         
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRXXXXXXXXXXXXXSQSKIKAAN 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
                            ILAEAITQPALVAVTS+VVEEYDPARPNDY    XXXXXXXXX
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERFSKNE
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGE+PGFT
Sbjct: 361 LAPMPGEIPGFT 372

[Close]

BLAST of CsGy6G036190 vs. NCBI nr
Match: XP_023543834.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.0 bits (1299), Expect = 2.2e-139
Identity = 312/372 (83.87%), Postives = 317/372 (85.22%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKM                            
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSRMKAAN 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
                            ILAEAITQPALVAVTS+VVEEYDPARPNDY     XXXXXXXX
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX INISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERFSKNE
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGE+PGFT
Sbjct: 361 LAPMPGEIPGFT 372

[Close]

BLAST of CsGy6G036190 vs. TAIR10
Match: AT1G30480.1 (D111/G-patch domain-containing protein)

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-103
Identity = 245/300 (81.67%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 85  QPALVAVTSTVVEEYDPARPNDY-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 144
           QPALV VTS+V+EEYDPARPNDY     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 88  QPALVGVTSSVIEEYDPARPNDYEEYKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147

Query: 145 XXXXXXXXXXXXXXINISGEEAWRRRAA----KSGAIPRSPSPPSSVDGFSIGKSETGGL 204
           XXXXXXXXXXX   +NISGEEAW+RRAA             SPP +VDGFSIGKSET GL
Sbjct: 148 XXXXXXXXXXXPSRLNISGEEAWKRRAAXXXXXXXXXXXXSSPPGNVDGFSIGKSETSGL 207

Query: 205 GVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS--- 264
           GVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS   
Sbjct: 208 GVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSA 267

Query: 265 -EKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNF 324
            +K VKSVN NG PTRVLLLRNMVGPG+VDDELE+EVG EC KYGTVTRVLIFEITEPNF
Sbjct: 268 EKKVVKSVNINGEPTRVLLLRNMVGPGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNF 327

Query: 325 PVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 372
           PV EAVRIFVQF R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PGE+PG+
Sbjct: 328 PVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 387

[Close]

BLAST of CsGy6G036190 vs. TAIR10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor)

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-07
Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 266 TRVLLLRNMVGPGEVDDELE-----EEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 325
           T V+ L  +V   E+ D+ E     E++  E  K+G +T V+I   +    PV    ++F
Sbjct: 471 TTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVF 530

Query: 326 VQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 361
           +++  ++ +T+A   ++GR FGG  V A +Y E++F + +
Sbjct: 531 LKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGD 570

[Close]

BLAST of CsGy6G036190 vs. Swiss-Prot
Match: sp|P42698|DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT111 PE=1 SV=2)

HSP 1 Score: 372.5 bits (955), Expect = 5.6e-102
Identity = 245/300 (81.67%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 85  QPALVAVTSTVVEEYDPARPNDY-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 144
           QPALV VTS+V+EEYDPARPNDY     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 88  QPALVGVTSSVIEEYDPARPNDYEEYKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147

Query: 145 XXXXXXXXXXXXXXINISGEEAWRRRAA----KSGAIPRSPSPPSSVDGFSIGKSETGGL 204
           XXXXXXXXXXX   +NISGEEAW+RRAA             SPP +VDGFSIGKSET GL
Sbjct: 148 XXXXXXXXXXXPSRLNISGEEAWKRRAAXXXXXXXXXXXXSSPPGNVDGFSIGKSETSGL 207

Query: 205 GVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS--- 264
           GVGAGGQMTAAQRMMAKMGWK+GQGLGK EQGITTPLMAKKTD RAGVIVNA++ KS   
Sbjct: 208 GVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSA 267

Query: 265 -EKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNF 324
            +K VKSVN NG PTRVLLLRNMVGPG+VDDELE+EVG EC KYGTVTRVLIFEITEPNF
Sbjct: 268 EKKVVKSVNINGEPTRVLLLRNMVGPGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNF 327

Query: 325 PVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 372
           PV EAVRIFVQF R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PGE+PG+
Sbjct: 328 PVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 387

[Close]

BLAST of CsGy6G036190 vs. Swiss-Prot
Match: sp|Q96I25|SPF45_HUMAN (Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-37
Identity = 85/164 (51.83%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 204 TAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKS----- 263
           T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ +   KS     
Sbjct: 237 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPL 296

Query: 264 VNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 323
                 PT+V+LLRNMVG GEVD++LE E   EC KYG V + +IFEI  P  P DEAVR
Sbjct: 297 TEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVR 356

Query: 324 IFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 363
           IF++FER E   KA+VDL+GRYFGGRVV+A FY+ ++F   +LA
Sbjct: 357 IFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398

[Close]

BLAST of CsGy6G036190 vs. Swiss-Prot
Match: sp|Q8JZX4|SPF45_MOUSE (Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-36
Identity = 86/168 (51.19%), Postives = 114/168 (67.86%), Query Frame = 0


Query: 204 TAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDT---KSEKKVKSVN 263
           T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T   +++   K  +
Sbjct: 237 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEAQDASKKSD 296

Query: 264 FNGL------PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVD 323
            N L      PT+V+LLRNMVG GEVD++LE E   EC KYG V + +IFEI  P  P D
Sbjct: 297 SNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDD 356

Query: 324 EAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 363
           EAVRIF++FER E   KA+VDL+GRYFGGRVV+A FY+ ++F   +LA
Sbjct: 357 EAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 402

[Close]

BLAST of CsGy6G036190 vs. Swiss-Prot
Match: sp|Q8T6B9|PUF68_DROME (Poly(U)-binding-splicing factor half pint OS=Drosophila melanogaster OX=7227 GN=hfp PE=1 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 6.5e-18
Identity = 49/101 (48.51%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 266 TRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 325
           +RV++LRNMVGP +VD+ L+EE+  EC+K+GTV+RV+IF E    N   DEA   V+IFV
Sbjct: 536 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 595

Query: 326 QFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 363
           +F    E  +    LDGR+FGGR V A  YD+  F + +L+
Sbjct: 596 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 636

[Close]

BLAST of CsGy6G036190 vs. Swiss-Prot
Match: sp|Q2HJG2|PUF60_BOVIN (Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-18
Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 268 VLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFERS 327
           V++LRNMV P ++DD+LE EV  EC K+G V RV+I++  +      +  V+IFV+F  +
Sbjct: 434 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSVA 493

Query: 328 EETTKALVDLDGRYFGGRVVRATFYDEERFSKNELA 363
            ET KA+ DL+GR+F GR V A  YD+ERF  ++L+
Sbjct: 494 SETHKAIQDLNGRWFAGRKVVAEVYDQERFDNSDLS 529

[Close]

BLAST of CsGy6G036190 vs. TrEMBL
Match: tr|A0A0A0KP45|A0A0A0KP45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 2.6e-144
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDYXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360
           VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNE 360

Query: 361 LAPMPGEVPGFT 373
           LAPMPGEVPGFT
Sbjct: 361 LAPMPGEVPGFT 372

[Close]

BLAST of CsGy6G036190 vs. TrEMBL
Match: tr|W9RFT6|W9RFT6_9ROSA (DNA-damage-repair/toleration protein OS=Morus notabilis OX=981085 GN=L484_026016 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 3.7e-127
Identity = 290/377 (76.92%), Postives = 305/377 (80.90%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKM-XXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSA+E+KP+NSTVWS+STKM                            
Sbjct: 1   MLGGLYGDLPPPSSADEEKPSNSTVWSTSTKMAPPTLRKPASVFAPPQMILKTQNKQKPG 60

Query: 61  XXXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDY-----XXXXXXX 120
                             ++ E + QPALV VTSTV+EEYDPARPNDY       XXXXX
Sbjct: 61  NSAQLKAVASPAVALLPTVVPEPVAQPALVGVTSTVLEEYDPARPNDYEDYRREKXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKSGAIPR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +NISGEEAWRRRAA SGA+PR
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDDSRLNISGEEAWRRRAAMSGALPR 180

Query: 181 SPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240
           SPSPPSS DGF IGKSETGGLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA
Sbjct: 181 SPSPPSSGDGFIIGKSETGGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMA 240

Query: 241 KKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAK 300
           KKTD RAGVIVNA++ K EKKVKSVN NG PTRVLLLRNMVGPGEVDDELE+EVGSECAK
Sbjct: 241 KKTDRRAGVIVNASEAKPEKKVKSVNLNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAK 300

Query: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEE 360
           YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGR+FGGRVVRATFYDEE
Sbjct: 301 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRFFGGRVVRATFYDEE 360

Query: 361 RFSKNELAPMPGEVPGF 372
           RFSKNELAPMPGEVPGF
Sbjct: 361 RFSKNELAPMPGEVPGF 377

[Close]

BLAST of CsGy6G036190 vs. TrEMBL
Match: tr|A0A2P5FT48|A0A2P5FT48_9ROSA (Splicing factor, SPF OS=Trema orientalis OX=63057 GN=TorRG33x02_031490 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.2e-125
Identity = 289/384 (75.26%), Postives = 307/384 (79.95%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKM-XXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSA+E+KPTNSTVWSSSTKM                            
Sbjct: 1   MLGGLYGDLPPPSSADEEKPTNSTVWSSSTKMAPPTLRKPSSVFAPPQTILKTQSKNKSG 60

Query: 61  XXXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDY------------ 120
                             +  E + QPALV VTSTV+EEYDPARPNDY            
Sbjct: 61  NSVPPKGIASPAVAPLPSVSPELVVQPALVGVTSTVIEEYDPARPNDYEEYRREXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +NISGEEAWRRRAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDSRLNISGEEAWRRRAA 180

Query: 181 KSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQG 240
            SGA+PRSPSPP++ DGF+IGKSET GLGVGAGG MTAAQRMMAKMGWKEGQGLGKQEQG
Sbjct: 181 MSGAVPRSPSPPNNGDGFAIGKSETSGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQG 240

Query: 241 ITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEE 300
           ITTPLMAKKTD RAGVIVNA+++K EKKVKSVN NG PTRVL+LRNMVGPGEVDDELEEE
Sbjct: 241 ITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNLNGPPTRVLMLRNMVGPGEVDDELEEE 300

Query: 301 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 360
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGRYFGGR+VR
Sbjct: 301 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRYFGGRIVR 360

Query: 361 ATFYDEERFSKNELAPMPGEVPGF 372
           A+FYDEERF KNELAPMPGE+PGF
Sbjct: 361 ASFYDEERFGKNELAPMPGEIPGF 384

[Close]

BLAST of CsGy6G036190 vs. TrEMBL
Match: tr|A0A2P5C166|A0A2P5C166_PARAD (Splicing factor, SPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192700 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 5.9e-125
Identity = 288/386 (74.61%), Postives = 306/386 (79.27%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKM-XXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSA+E+KPTNSTVWSSSTKM                            
Sbjct: 1   MLGGLYGDLPPPSSADEEKPTNSTVWSSSTKMAPPTLRKPSSVFAPPQTILKTQSKNKSA 60

Query: 61  XXXXXXXXXXXXXXXXXXILAEAITQPALVAVTSTVVEEYDPARPNDY------------ 120
                             +  E + QPALV VTSTV+EEYDPARPNDY            
Sbjct: 61  NSVPPKGITSPAVAPLASVSPELVVQPALVGVTSTVIEEYDPARPNDYEEYRREXXXXXX 120

Query: 121 --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRR 180
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +NISGEEAWRRR
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDSRLNISGEEAWRRR 180

Query: 181 AAKSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQE 240
           AA SG +PRSPSPP++ DGF+IGKSET GLGVGAGG MTAAQRMMAKMGWKEGQGLGKQE
Sbjct: 181 AAMSGTVPRSPSPPNNGDGFAIGKSETSGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQE 240

Query: 241 QGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELE 300
           QGITTPLMAKKTD RAGVIVNA+++K EKKVKSVN NG PTRVL+LRNMVGPGEVDDELE
Sbjct: 241 QGITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNLNGPPTRVLMLRNMVGPGEVDDELE 300

Query: 301 EEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRV 360
           EEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKAL+DLDGRYFGGR+
Sbjct: 301 EEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRYFGGRI 360

Query: 361 VRATFYDEERFSKNELAPMPGEVPGF 372
           VRA+FYDEERF KNELAPMPGE+PGF
Sbjct: 361 VRASFYDEERFGKNELAPMPGEIPGF 386

[Close]

BLAST of CsGy6G036190 vs. TrEMBL
Match: tr|F6HLX4|F6HLX4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04720 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 8.6e-124
Identity = 290/383 (75.72%), Postives = 304/383 (79.37%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MLGGLYGDLPPPSSA+EDKPTNS+VWSSS KM                            
Sbjct: 1   MLGGLYGDLPPPSSADEDKPTNSSVWSSSAKMAPAALRKPSSVFAPPQSVLKTQHAQAKP 60

Query: 61  XXXXXXXXXXXXXXXXXI-------LAEAITQPALVAVTSTVVEEYDPARPNDY----XX 120
                                          QPALV VTS+VVEEYDPARPNDY     X
Sbjct: 61  KTLNSSKILISPGLAPSPSVLPNEGARSPSFQPALVGVTSSVVEEYDPARPNDYEDYRRX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINISGEEAWRRRAAKS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +NISGEEAWRRRAA S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDSRLNISGEEAWRRRAAMS 180

Query: 181 GAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGIT 240
           GA+PRSPSPP+S DGF+IGKSET GLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGIT
Sbjct: 181 GAVPRSPSPPTSGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGIT 240

Query: 241 TPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVG 300
           TPLMAKKTD RAGVIVNA+++K EKKVKSVNFN  PTRVLLLRNMVGPGEVDDELE+EVG
Sbjct: 241 TPLMAKKTDRRAGVIVNASESKPEKKVKSVNFNSPPTRVLLLRNMVGPGEVDDELEDEVG 300

Query: 301 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRAT 360
           SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGR+FGGRVV AT
Sbjct: 301 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRFFGGRVVHAT 360

Query: 361 FYDEERFSKNELAPMPGEVPGFT 373
           FYDE+RFSKNELAPMPGE+PGFT
Sbjct: 361 FYDEDRFSKNELAPMPGEIPGFT 383

The following BLAST results are available for this feature:

BLAST of CsGy6G036190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134609.1	3.9e-144	100.00	PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis s...	[more]
XP_022146691.1	1.4e-141	90.59	DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia]	[more]
XP_023003194.1	8.9e-141	93.82	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxim...	[more]
XP_022925977.1	2.2e-139	87.90	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita mosch...	[more]
XP_023543834.1	2.2e-139	83.87	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo ...	[more]

BLAST of CsGy6G036190 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30480.1	3.1e-103	81.67	D111/G-patch domain-containing protein	[more]
AT4G36690.1	5.4e-07	29.00	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

BLAST of CsGy6G036190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42698\|DR111_ARATH	5.6e-102	81.67	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q96I25\|SPF45_HUMAN	1.3e-37	51.83	Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1	[more]
sp\|Q8JZX4\|SPF45_MOUSE	1.1e-36	51.19	Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1	[more]
sp\|Q8T6B9\|PUF68_DROME	6.5e-18	48.51	Poly(U)-binding-splicing factor half pint OS=Drosophila melanogaster OX=7227 GN=...	[more]
sp\|Q2HJG2\|PUF60_BOVIN	8.5e-18	46.88	Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1	[more]

BLAST of CsGy6G036190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KP45\|A0A0A0KP45_CUCSA	2.6e-144	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1	[more]
tr\|W9RFT6\|W9RFT6_9ROSA	3.7e-127	76.92	DNA-damage-repair/toleration protein OS=Morus notabilis OX=981085 GN=L484_026016...	[more]
tr\|A0A2P5FT48\|A0A2P5FT48_9ROSA	1.2e-125	75.26	Splicing factor, SPF OS=Trema orientalis OX=63057 GN=TorRG33x02_031490 PE=4 SV=1	[more]
tr\|A0A2P5C166\|A0A2P5C166_PARAD	5.9e-125	74.61	Splicing factor, SPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192700 PE=4 ...	[more]
tr\|F6HLX4\|F6HLX4_VITVI	8.6e-124	75.72	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04720 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043484	regulation of RNA splicing
GO:0006281	DNA repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR034653	SPF45_RRM
IPR000504	RRM_dom
IPR016967	Splicing_factor_SPF45
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR003954	RRM_dom_euk
IPR000467	G_patch_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0043484	regulation of RNA splicing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G036190.1	CsGy6G036190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..167
None	No IPR available	PANTHER	PTHR13288	DNA-DAMAGE REPAIR PROTEIN DRT111	coord: 1..362
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 200..246 e-value: 1.4E-15 score: 67.8
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 205..244 e-value: 9.2E-17 score: 60.6
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 202..248 score: 15.451
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 268..349 e-value: 6.1E-28 score: 108.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 266..352 e-value: 6.2E-26 score: 92.3
IPR016967	Splicing factor, SPF45	PIRSF	PIRSF031066	SPF45	coord: 3..368 e-value: 9.4E-122 score: 405.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 267..353 score: 9.951
IPR034653	SPF45, RNA recognition motif	CDD	cd12647	RRM_UHM_SPF45	coord: 265..361 e-value: 4.72843E-49 score: 161.671
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 269..355

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G036190	Cla009824	Watermelon (97103) v1	cgybwmB468
CsGy6G036190	Csa6G525420	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G036190	MELO3C007079	Melon (DHL92) v3.5.1	cgybmeB445
CsGy6G036190	ClCG01G025100	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G036190	CSPI06G36810	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G036190	CmaCh03G014440	Cucurbita maxima (Rimu)	cgybcmaB830
CsGy6G036190	CmaCh07G000640	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G036190	CmoCh03G014410	Cucurbita moschata (Rifu)	cgybcmoB809
CsGy6G036190	CmoCh07G000660	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G036190	Lsi01G000860	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G036190	Cp4.1LG19g05670	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G036190	Cp4.1LG10g06340	Cucurbita pepo (Zucchini)	cgybcpeB713
CsGy6G036190	MELO3C007079.2	Melon (DHL92) v3.6.1	cgybmedB442
CsGy6G036190	CsaV3_6G052300	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G036190	Cla97C01G025150	Watermelon (97103) v2	cgybwmbB394
CsGy6G036190	Bhi03G000141	Wax gourd	cgybwgoB590
CsGy6G036190	Carg19310	Silver-seed gourd	carcgybB0312
CsGy6G036190	Carg14969	Silver-seed gourd	carcgybB0726

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None