MELO3C006458 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006458
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Proteinase inhibitor
Location	chr6 : 3388076 .. 3392650 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGATCAATCTGCTCCAAGTAAGTTCATCCTATCAAAACTATCTTCACTTTTGAGAAACTAGTTTTGATTCAATGGTTTGTAAACTAACATGAACTTGATCGGCTATCACAAGTATGGGAAGTCAAATCAATTTAAGACACAGAAAACCAATACCCCTGTACTTGTTTATGTTAACCTAAAATGTATTAATTTGGTTTTATTCGATTTGAAGTTTTGTATATTTTGTGTTTGCGAGAGGGTATATTTTGATTGGATTTTACTTGATATCTATCGCAAAATTTAACATAAATATATAATTTTTAAATAGGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

mRNA sequence

ATGGCTGAAGATCAATCTGCTCCAAGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

Coding sequence (CDS)

ATGGCTGAAGATCAATCTGCTCCAAGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

Protein sequence

MAEDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVVVKTPKVG*

Homology

[Close]

BLAST of MELO3C006458 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.5e-07
Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 6  SAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVV 65
          S P K+ WP LV V  S A AIIE++NP+VKAV +  G    ++F   RV   VN   +V
Sbjct: 2  SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61

Query: 66 VKTPKVG 73
          V  P++G
Sbjct: 62 VSPPRIG 68

[Close]

BLAST of MELO3C006458 vs. Swiss-Prot
Match: ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.5e-06
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 5  QSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDV 64
          +  P K +WPELV      AAAIIE+ENP+V+++         ++F   RVW  V+   V
Sbjct: 2  RECPGKQEWPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDSTGV 61

Query: 65 VVKTPKV 72
          VV+TP+V
Sbjct: 62 VVRTPRV 68

[Close]

BLAST of MELO3C006458 vs. TrEMBL
Match: A0A0A0L8E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-23
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVFVKYS AAAIIEKENPDV+AVKILSG  RI NFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VVVKTPKVG 73
          VVVK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458 vs. TrEMBL
Match: A0A0A0L785_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-18
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVFV + TAA IIEKENPDVKA+KIL    RIQNFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VVVKTPKVG 73
           VVK P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458 vs. TrEMBL
Match: A0A0A0L9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-10
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVE 62
          +++   RK+ WPELV V +S AA IIE ENP+VKA KIL G   I N+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVVVKTPKVG 73
          D VV  P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458 vs. TrEMBL
Match: A0A0A0L4I0_CUCSA (Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-09
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV V YSTAA  IE EN  VKA+K L G     NFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VVVKTPKVG 73
           VV+ P VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458 vs. TrEMBL
Match: A0A0A0KME7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G286040 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-08
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVK-AVKILSGRFRIQNFDTKRVWCDVNVE 63
          D   P K QWPELV VK +TA  II+K+NP+V+  V +L+G    ++    RVW  VN+ 
Sbjct: 3  DICPPGKNQWPELVGVKATTAKYIIKKDNPNVENVVVLLAGSGTTEDIRCDRVWVFVNIH 62

Query: 64 DVVVKTPKVG 73
          D+VV+ PKVG
Sbjct: 63 DLVVEVPKVG 72

[Close]

BLAST of MELO3C006458 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 53.5 bits (127), Expect = 6.2e-08
Identity = 30/65 (46.15%), Postives = 33/65 (50.77%), Query Frame = 1


Query: 8  PRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVVVK 67
          PRK  WPEL       AA +IE+ENP V A  IL G     +F   RV   V+   +VVK
Sbjct: 6  PRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIVVK 65

Query: 68 TPKVG 73
          TPK G
Sbjct: 66 TPKSG 70

[Close]

BLAST of MELO3C006458 vs. TAIR10
Match: AT5G43580.1 (AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-07
Identity = 30/72 (41.67%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 1  MAEDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVN 60
          MA     P K+ WPEL+  K   A  +IE+ENP +KAV IL G    + F   RV+  VN
Sbjct: 28 MASICEDPGKSSWPELLGAKGEDAKEVIERENPKMKAVIILDGTVVPEIFICSRVYVWVN 87

Query: 61 VEDVVVKTPKVG 73
             +VV+ P +G
Sbjct: 88 DCGIVVQIPIIG 99

[Close]

BLAST of MELO3C006458 vs. NCBI nr
Match: gi|700201764|gb|KGN56897.1| (hypothetical protein Csa_3G142910 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-22
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVFVKYS AAAIIEKENPDV+AVKILSG  RI NFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VVVKTPKVG 73
          VVVK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458 vs. NCBI nr
Match: gi|700201761|gb|KGN56894.1| (hypothetical protein Csa_3G141900 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 6.3e-18
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVFV + TAA IIEKENPDVKA+KIL    RIQNFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VVVKTPKVG 73
           VVK P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458 vs. NCBI nr
Match: gi|700201763|gb|KGN56896.1| (hypothetical protein Csa_3G142410 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-10
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVE 62
          +++   RK+ WPELV V +S AA IIE ENP+VKA KIL G   I N+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVVVKTPKVG 73
          D VV  P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458 vs. NCBI nr
Match: gi|700201762|gb|KGN56895.1| (Protease inhibitor protein [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-09
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV V YSTAA  IE EN  VKA+K L G     NFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VVVKTPKVG 73
           VV+ P VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458 vs. NCBI nr
Match: gi|700195663|gb|KGN50840.1| (hypothetical protein Csa_5G286040 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 7.7e-08
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVK-AVKILSGRFRIQNFDTKRVWCDVNVE 63
          D   P K QWPELV VK +TA  II+K+NP+V+  V +L+G    ++    RVW  VN+ 
Sbjct: 3  DICPPGKNQWPELVGVKATTAKYIIKKDNPNVENVVVLLAGSGTTEDIRCDRVWVFVNIH 62

Query: 64 DVVVKTPKVG 73
          D+VV+ PKVG
Sbjct: 63 DLVVEVPKVG 72

The following BLAST results are available for this feature:

BLAST of MELO3C006458 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ITH5_CUCMA	8.5e-07	44.78	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1	[more]
ATSI_AMACA	5.5e-06	41.79	Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1	[more]

BLAST of MELO3C006458 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8E6_CUCSA	7.7e-23	79.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1	[more]
A0A0A0L785_CUCSA	4.4e-18	68.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1	[more]
A0A0A0L9Z4_CUCSA	2.0e-10	54.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1	[more]
A0A0A0L4I0_CUCSA	3.7e-09	53.62	Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1	[more]
A0A0A0KME7_CUCSA	5.3e-08	48.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G286040 PE=4 SV=1	[more]

BLAST of MELO3C006458 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38870.1	6.2e-08	46.15	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT5G43580.1	3.1e-07	41.67	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

BLAST of MELO3C006458 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201764\|gb\|KGN56897.1\|	1.1e-22	79.71	hypothetical protein Csa_3G142910 [Cucumis sativus]	[more]
gi\|700201761\|gb\|KGN56894.1\|	6.3e-18	68.12	hypothetical protein Csa_3G141900 [Cucumis sativus]	[more]
gi\|700201763\|gb\|KGN56896.1\|	2.8e-10	54.29	hypothetical protein Csa_3G142410 [Cucumis sativus]	[more]
gi\|700201762\|gb\|KGN56895.1\|	5.3e-09	53.62	Protease inhibitor protein [Cucumis sativus]	[more]
gi\|700195663\|gb\|KGN50840.1\|	7.7e-08	48.57	hypothetical protein Csa_5G286040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000864	Prot_inh_pot1
IPR000864	Prot_inh_pot1
IPR000864	Prot_inh_pot1

Vocabulary: **Molecular Function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity
GO:0004867	serine-type endopeptidase inhibitor activity
GO:0004867	serine-type endopeptidase inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009611	response to wounding
GO:0009611	response to wounding
GO:0009611	response to wounding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54301	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006458T1	MELO3C006458T1	mRNA
MELO3C006458T2	MELO3C006458T2	mRNA
MELO3C006458T3	MELO3C006458T3	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54301	MU54301	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRODOM	PD002604		coord: 12..72 score: 2.
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 10..72 score: 6.2
IPR000864	Proteinase inhibitor I13, potato inhibitor I	unknown	SSF54654	CI-2 family of serine protease inhibitors	coord: 7..72 score: 1.01
None	No IPR available	GENE3D	G3DSA:3.30.10.10		coord: 8..72 score: 3.1
None	No IPR available	PANTHER	PTHR33091	FAMILY NOT NAMED	coord: 10..72 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006458	Cucumber (Gy14) v2	cgybmeB126
MELO3C006458	Cucumber (Gy14) v2	cgybmeB200
MELO3C006458	Silver-seed gourd	carmeB0236
MELO3C006458	Silver-seed gourd	carmeB0240
MELO3C006458	Silver-seed gourd	carmeB0941
MELO3C006458	Silver-seed gourd	carmeB1050
MELO3C006458	Cucumber (Chinese Long) v3	cucmeB147
MELO3C006458	Cucumber (Chinese Long) v3	cucmeB148
MELO3C006458	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006458	Watermelon (97103) v2	mewmbB434
MELO3C006458	Watermelon (97103) v2	mewmbB448
MELO3C006458	Watermelon (97103) v2	mewmbB451
MELO3C006458	Wax gourd	mewgoB514
MELO3C006458	Wax gourd	mewgoB552
MELO3C006458	Wax gourd	mewgoB558
MELO3C006458	Melon (DHL92) v3.5.1	memeB147
MELO3C006458	Melon (DHL92) v3.5.1	memeB149
MELO3C006458	Cucumber (Gy14) v1	cgymeB439
MELO3C006458	Cucumber (Gy14) v1	cgymeB625
MELO3C006458	Cucurbita maxima (Rimu)	cmameB002
MELO3C006458	Cucurbita maxima (Rimu)	cmameB242
MELO3C006458	Cucurbita maxima (Rimu)	cmameB763
MELO3C006458	Cucurbita maxima (Rimu)	cmameB850
MELO3C006458	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006458	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006458	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006458	Wild cucumber (PI 183967)	cpimeB144
MELO3C006458	Wild cucumber (PI 183967)	cpimeB146
MELO3C006458	Wild cucumber (PI 183967)	cpimeB230
MELO3C006458	Cucumber (Chinese Long) v2	cumeB145
MELO3C006458	Cucumber (Chinese Long) v2	cumeB147
MELO3C006458	Cucumber (Chinese Long) v2	cumeB236
MELO3C006458	Watermelon (Charleston Gray)	mewcgB425
MELO3C006458	Watermelon (Charleston Gray)	mewcgB427
MELO3C006458	Watermelon (Charleston Gray)	mewcgB441
MELO3C006458	Watermelon (Charleston Gray)	mewcgB445
MELO3C006458	Watermelon (97103) v1	mewmB486
MELO3C006458	Watermelon (97103) v1	mewmB459
MELO3C006458	Watermelon (97103) v1	mewmB461
MELO3C006458	Cucurbita pepo (Zucchini)	cpemeB316
MELO3C006458	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006458	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006458	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006458	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006458	Bottle gourd (USVL1VR-Ls)	lsimeB382