MELO3C006458T3 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006458T3
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Proteinase inhibitor
Location	chr6 : 3391917 .. 3392418 (+)
Sequence length	219

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGATCAATCTGCTCCAAGTAAGTTCATCCTATCAAAACGATCTTCATTTTTGAGAAACTAGTTTCGATTGAATGGTTTGTAAACTAACATGAATTTGATCAACTATCGCAAGTGTGATAGTCTTGGAAGTCAAATCAATTCACAGAAAACCAACTATCACAAGTATTTTATGTTCTGTAGGATTTAACTTTATTCATATTGAAGTTTTGTATATTTTGAGTCTGTCAGAGTATACACTTTGAATGGATTTAAGTTAATATCTATGGCAAAATTTAACATAAATATATAATTTTTAAATAGGAAAAACTCAATGGCCAGAGCTTGTCTTCATAAAATATTCTATTGCTGCCGCGATCATAGAAAGAGAGAATCCTGATGTGGAAGCTGTCAAGATTCTATCTGGTACACCTAGAATTCTGAATTTTGATACCAAACGAGTTTGGTGTGATGTCAATGTGGAAGATGTAATTGTGAAAATGCCCAAAGTTGGTTAG

mRNA sequence

ATGGCTGAAGATCAATCTGCTCCAAGAAAAACTCAATGGCCAGAGCTTGTCTTCATAAAATATTCTATTGCTGCCGCGATCATAGAAAGAGAGAATCCTGATGTGGAAGCTGTCAAGATTCTATCTGGTACACCTAGAATTCTGAATTTTGATACCAAACGAGTTTGGTGTGATGTCAATGTGGAAGATGTAATTGTGAAAATGCCCAAAGTTGGTTAG

Coding sequence (CDS)

ATGGCTGAAGATCAATCTGCTCCAAGAAAAACTCAATGGCCAGAGCTTGTCTTCATAAAATATTCTATTGCTGCCGCGATCATAGAAAGAGAGAATCCTGATGTGGAAGCTGTCAAGATTCTATCTGGTACACCTAGAATTCTGAATTTTGATACCAAACGAGTTTGGTGTGATGTCAATGTGGAAGATGTAATTGTGAAAATGCCCAAAGTTGGTTAG

Protein sequence

MAEDQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVEDVIVKMPKVG*

Homology

[Close]

BLAST of MELO3C006458T3 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-08
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 1


Query: 6  SAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVEDVI 65
          S P K+ WP LV +  S+A AIIER+NP+V+AV +  GTP   +F   RV   VN   ++
Sbjct: 2  SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61

Query: 66 VKMPKVG 73
          V  P++G
Sbjct: 62 VSPPRIG 68

[Close]

BLAST of MELO3C006458T3 vs. TrEMBL
Match: A0A0A0L8E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.7e-26
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVF+KYSIAAAIIE+ENPDVEAVKILSGTPRILNFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VIVKMPKVG 73
          V+VK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458T3 vs. TrEMBL
Match: A0A0A0L785_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.7e-17
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVF+ +  AA IIE+ENPDV+A+KIL  +PRI NFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VIVKMPKVG 73
           +VK+P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458T3 vs. TrEMBL
Match: A0A0A0L9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.7e-12
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVE 62
          +++   RK+ WPELV + +S AA IIE ENP+V+A KIL G+P ILN+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVIVKMPKVG 73
          D +V +P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458T3 vs. TrEMBL
Match: A0A0A0L4I0_CUCSA (Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV + YS AA  IE EN  V+A+K L G+P  LNFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VIVKMPKVG 73
           +V+MP VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458T3 vs. TrEMBL
Match: W9S0M9_9ROSA (Proteinase inhibitor OS=Morus notabilis GN=L484_005748 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-08
Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 1


Query: 1  MAEDQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVN 60
          MA DQ  P K  WPELV +   IAAA IE+ENP+V+A+  L GTP I ++   RVW  VN
Sbjct: 1  MASDQ-CPGKKSWPELVGVCGEIAAAKIEKENPNVDAIVKLQGTPVIQDYRCNRVWIWVN 60

Query: 61 VEDVIVKMPKVG 73
             V+  +P VG
Sbjct: 61 THGVVSTVPHVG 71

[Close]

BLAST of MELO3C006458T3 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 57.0 bits (136), Expect = 5.6e-09
Identity = 30/65 (46.15%), Postives = 34/65 (52.31%), Query Frame = 1


Query: 8  PRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVEDVIVK 67
          PRK  WPEL       AA +IERENP V A  IL G+P   +F   RV   V+   ++VK
Sbjct: 6  PRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIVVK 65

Query: 68 MPKVG 73
           PK G
Sbjct: 66 TPKSG 70

[Close]

BLAST of MELO3C006458T3 vs. TAIR10
Match: AT5G43580.1 (AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 50.1 bits (118), Expect = 6.9e-07
Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1


Query: 1  MAEDQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVN 60
          MA     P K+ WPEL+  K   A  +IERENP ++AV IL GT     F   RV+  VN
Sbjct: 28 MASICEDPGKSSWPELLGAKGEDAKEVIERENPKMKAVIILDGTVVPEIFICSRVYVWVN 87

Query: 61 VEDVIVKMPKVG 73
             ++V++P +G
Sbjct: 88 DCGIVVQIPIIG 99

[Close]

BLAST of MELO3C006458T3 vs. NCBI nr
Match: gi|700201764|gb|KGN56897.1| (hypothetical protein Csa_3G142910 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 8.2e-26
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVF+KYSIAAAIIE+ENPDVEAVKILSGTPRILNFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VIVKMPKVG 73
          V+VK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458T3 vs. NCBI nr
Match: gi|700201761|gb|KGN56894.1| (hypothetical protein Csa_3G141900 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-17
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVF+ +  AA IIE+ENPDV+A+KIL  +PRI NFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VIVKMPKVG 73
           +VK+P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458T3 vs. NCBI nr
Match: gi|700201763|gb|KGN56896.1| (hypothetical protein Csa_3G142410 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-12
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVE 62
          +++   RK+ WPELV + +S AA IIE ENP+V+A KIL G+P ILN+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVIVKMPKVG 73
          D +V +P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458T3 vs. NCBI nr
Match: gi|700201762|gb|KGN56895.1| (Protease inhibitor protein [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-10
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV + YS AA  IE EN  V+A+K L G+P  LNFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VIVKMPKVG 73
           +V+MP VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458T3 vs. NCBI nr
Match: gi|720071522|ref|XP_010278088.1| (PREDICTED: inhibitor of trypsin and hageman factor-like [Nelumbo nucifera])

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-09
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 10 KTQWPELVFIKYSIAAAIIERENPDVEAVKILSGTPRILNFDTKRVWCDVNVEDVIVKMP 69
          K+ WPELV  +  +A A IE+ENP V A+ +L GTP ILNFD  RVW  V+    + K+P
Sbjct: 8  KSSWPELVGAEGEVAKATIEQENPAVTAIIVLEGTPVILNFDCTRVWVWVDTNGTVTKVP 67

Query: 70 KVG 73
          K+G
Sbjct: 68 KIG 70

The following BLAST results are available for this feature:

BLAST of MELO3C006458T3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ITH5_CUCMA	2.6e-08	44.78	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1	[more]

BLAST of MELO3C006458T3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8E6_CUCSA	5.7e-26	82.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1	[more]
A0A0A0L785_CUCSA	3.7e-17	60.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1	[more]
A0A0A0L9Z4_CUCSA	4.7e-12	52.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1	[more]
A0A0A0L4I0_CUCSA	1.2e-10	52.17	Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1	[more]
W9S0M9_9ROSA	1.8e-08	50.00	Proteinase inhibitor OS=Morus notabilis GN=L484_005748 PE=4 SV=1	[more]

BLAST of MELO3C006458T3 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38870.1	5.6e-09	46.15	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT5G43580.1	6.9e-07	41.67	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

BLAST of MELO3C006458T3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201764\|gb\|KGN56897.1\|	8.2e-26	82.61	hypothetical protein Csa_3G142910 [Cucumis sativus]	[more]
gi\|700201761\|gb\|KGN56894.1\|	5.3e-17	60.87	hypothetical protein Csa_3G141900 [Cucumis sativus]	[more]
gi\|700201763\|gb\|KGN56896.1\|	6.7e-12	52.86	hypothetical protein Csa_3G142410 [Cucumis sativus]	[more]
gi\|700201762\|gb\|KGN56895.1\|	1.7e-10	52.17	Protease inhibitor protein [Cucumis sativus]	[more]
gi\|720071522\|ref\|XP_010278088.1\|	3.1e-09	50.79	PREDICTED: inhibitor of trypsin and hageman factor-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000864	Prot_inh_pot1

Vocabulary: **Molecular Function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009611	response to wounding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding
biological_process	GO:0010951	negative regulation of endopeptidase activity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006458	MELO3C006458	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006458T3	MELO3C006458T3-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006458T3.cds1	MELO3C006458T3.cds1	CDS
MELO3C006458T3.cds2	MELO3C006458T3.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRODOM	PD002604		coord: 12..72 score: 2.
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 10..72 score: 6.2
IPR000864	Proteinase inhibitor I13, potato inhibitor I	unknown	SSF54654	CI-2 family of serine protease inhibitors	coord: 7..72 score: 1.01
None	No IPR available	GENE3D	G3DSA:3.30.10.10		coord: 8..72 score: 3.1
None	No IPR available	PANTHER	PTHR33091	FAMILY NOT NAMED	coord: 10..72 score: 8.0