MELO3C006458T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006458T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Proteinase inhibitor
Location	chr6 : 3388076 .. 3388584 (+)
Sequence length	219

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGATCAATCTGCTCCAAGTAAGTTCATCCTATCAAAACTATCTTCACTTTTGAGAAACTAGTTTTGATTCAATGGTTTGTAAACTAACATGAACTTGATCGGCTATCACAAGTATGGGAAGTCAAATCAATTTAAGACACAGAAAACCAATACCCCTGTACTTGTTTATGTTAACCTAAAATGTATTAATTTGGTTTTATTCGATTTGAAGTTTTGTATATTTTGTGTTTGCGAGAGGGTATATTTTGATTGGATTTTACTTGATATCTATCGCAAAATTTAACATAAATATATAATTTTTAAATAGGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

mRNA sequence

ATGGCTGAAGATCAATCTGCTCCAAGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

Coding sequence (CDS)

ATGGCTGAAGATCAATCTGCTCCAAGGAAAACTCAATGGCCAGAGCTTGTCTTTGTAAAATACTCTACTGCTGCTGCAATCATAGAAAAAGAGAATCCTGATGTGAAAGCCGTCAAGATTCTATCCGGTAGATTTAGAATTCAGAATTTTGATACTAAACGAGTTTGGTGTGATGTCAATGTGGAAGACGTAGTTGTGAAAACGCCCAAGGTTGGTTAG

Protein sequence

MAEDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVVVKTPKVG*

Homology

[Close]

BLAST of MELO3C006458T1 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.5e-07
Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 6  SAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVV 65
          S P K+ WP LV V  S A AIIE++NP+VKAV +  G    ++F   RV   VN   +V
Sbjct: 2  SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61

Query: 66 VKTPKVG 73
          V  P++G
Sbjct: 62 VSPPRIG 68

[Close]

BLAST of MELO3C006458T1 vs. Swiss-Prot
Match: ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.5e-06
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 5  QSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDV 64
          +  P K +WPELV      AAAIIE+ENP+V+++         ++F   RVW  V+   V
Sbjct: 2  RECPGKQEWPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDSTGV 61

Query: 65 VVKTPKV 72
          VV+TP+V
Sbjct: 62 VVRTPRV 68

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BLAST of MELO3C006458T1 vs. TrEMBL
Match: A0A0A0L8E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-23
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVFVKYS AAAIIEKENPDV+AVKILSG  RI NFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VVVKTPKVG 73
          VVVK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458T1 vs. TrEMBL
Match: A0A0A0L785_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-18
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVFV + TAA IIEKENPDVKA+KIL    RIQNFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VVVKTPKVG 73
           VVK P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458T1 vs. TrEMBL
Match: A0A0A0L9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-10
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVE 62
          +++   RK+ WPELV V +S AA IIE ENP+VKA KIL G   I N+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVVVKTPKVG 73
          D VV  P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458T1 vs. TrEMBL
Match: A0A0A0L4I0_CUCSA (Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-09
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV V YSTAA  IE EN  VKA+K L G     NFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VVVKTPKVG 73
           VV+ P VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458T1 vs. TrEMBL
Match: A0A0A0KME7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G286040 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-08
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVK-AVKILSGRFRIQNFDTKRVWCDVNVE 63
          D   P K QWPELV VK +TA  II+K+NP+V+  V +L+G    ++    RVW  VN+ 
Sbjct: 3  DICPPGKNQWPELVGVKATTAKYIIKKDNPNVENVVVLLAGSGTTEDIRCDRVWVFVNIH 62

Query: 64 DVVVKTPKVG 73
          D+VV+ PKVG
Sbjct: 63 DLVVEVPKVG 72

[Close]

BLAST of MELO3C006458T1 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 53.5 bits (127), Expect = 6.2e-08
Identity = 30/65 (46.15%), Postives = 33/65 (50.77%), Query Frame = 1


Query: 8  PRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVEDVVVK 67
          PRK  WPEL       AA +IE+ENP V A  IL G     +F   RV   V+   +VVK
Sbjct: 6  PRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIVVK 65

Query: 68 TPKVG 73
          TPK G
Sbjct: 66 TPKSG 70

[Close]

BLAST of MELO3C006458T1 vs. TAIR10
Match: AT5G43580.1 (AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-07
Identity = 30/72 (41.67%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 1  MAEDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVN 60
          MA     P K+ WPEL+  K   A  +IE+ENP +KAV IL G    + F   RV+  VN
Sbjct: 28 MASICEDPGKSSWPELLGAKGEDAKEVIERENPKMKAVIILDGTVVPEIFICSRVYVWVN 87

Query: 61 VEDVVVKTPKVG 73
             +VV+ P +G
Sbjct: 88 DCGIVVQIPIIG 99

[Close]

BLAST of MELO3C006458T1 vs. NCBI nr
Match: gi|700201764|gb|KGN56897.1| (hypothetical protein Csa_3G142910 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-22
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SAPRKT+WPELVFVKYS AAAIIEKENPDV+AVKILSG  RI NFD  RVW D+NVE+
Sbjct: 3  EESAPRKTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEE 62

Query: 64 VVVKTPKVG 73
          VVVK PKVG
Sbjct: 63 VVVKKPKVG 71

[Close]

BLAST of MELO3C006458T1 vs. NCBI nr
Match: gi|700201761|gb|KGN56894.1| (hypothetical protein Csa_3G141900 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 6.3e-18
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA RKT+WPELVFV + TAA IIEKENPDVKA+KIL    RIQNFD  RVW D N+E+
Sbjct: 3  EESAQRKTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEE 62

Query: 64 VVVKTPKVG 73
           VVK P VG
Sbjct: 63 RVVKVPSVG 71

[Close]

BLAST of MELO3C006458T1 vs. NCBI nr
Match: gi|700201763|gb|KGN56896.1| (hypothetical protein Csa_3G142410 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-10
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 3  EDQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVE 62
          +++   RK+ WPELV V +S AA IIE ENP+VKA KIL G   I N+D  RVW   N E
Sbjct: 2  DEEFDTRKSIWPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTE 61

Query: 63 DVVVKTPKVG 73
          D VV  P+VG
Sbjct: 62 DKVVDIPRVG 71

[Close]

BLAST of MELO3C006458T1 vs. NCBI nr
Match: gi|700201762|gb|KGN56895.1| (Protease inhibitor protein [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-09
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVKAVKILSGRFRIQNFDTKRVWCDVNVED 63
          ++SA  KTQWPELV V YSTAA  IE EN  VKA+K L G     NFD +RV    + +D
Sbjct: 3  EESAREKTQWPELVGVDYSTAATTIETENSHVKAIKFLVGSPMYLNFDPRRVRVVCDTQD 62

Query: 64 VVVKTPKVG 73
           VV+ P VG
Sbjct: 63 KVVEMPYVG 71

[Close]

BLAST of MELO3C006458T1 vs. NCBI nr
Match: gi|700195663|gb|KGN50840.1| (hypothetical protein Csa_5G286040 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 7.7e-08
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 4  DQSAPRKTQWPELVFVKYSTAAAIIEKENPDVK-AVKILSGRFRIQNFDTKRVWCDVNVE 63
          D   P K QWPELV VK +TA  II+K+NP+V+  V +L+G    ++    RVW  VN+ 
Sbjct: 3  DICPPGKNQWPELVGVKATTAKYIIKKDNPNVENVVVLLAGSGTTEDIRCDRVWVFVNIH 62

Query: 64 DVVVKTPKVG 73
          D+VV+ PKVG
Sbjct: 63 DLVVEVPKVG 72

The following BLAST results are available for this feature:

BLAST of MELO3C006458T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ITH5_CUCMA	8.5e-07	44.78	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1	[more]
ATSI_AMACA	5.5e-06	41.79	Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1	[more]

BLAST of MELO3C006458T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8E6_CUCSA	7.7e-23	79.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1	[more]
A0A0A0L785_CUCSA	4.4e-18	68.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1	[more]
A0A0A0L9Z4_CUCSA	2.0e-10	54.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1	[more]
A0A0A0L4I0_CUCSA	3.7e-09	53.62	Protease inhibitor protein OS=Cucumis sativus GN=Csa_3G142400 PE=4 SV=1	[more]
A0A0A0KME7_CUCSA	5.3e-08	48.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G286040 PE=4 SV=1	[more]

BLAST of MELO3C006458T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38870.1	6.2e-08	46.15	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT5G43580.1	3.1e-07	41.67	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

BLAST of MELO3C006458T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201764\|gb\|KGN56897.1\|	1.1e-22	79.71	hypothetical protein Csa_3G142910 [Cucumis sativus]	[more]
gi\|700201761\|gb\|KGN56894.1\|	6.3e-18	68.12	hypothetical protein Csa_3G141900 [Cucumis sativus]	[more]
gi\|700201763\|gb\|KGN56896.1\|	2.8e-10	54.29	hypothetical protein Csa_3G142410 [Cucumis sativus]	[more]
gi\|700201762\|gb\|KGN56895.1\|	5.3e-09	53.62	Protease inhibitor protein [Cucumis sativus]	[more]
gi\|700195663\|gb\|KGN50840.1\|	7.7e-08	48.57	hypothetical protein Csa_5G286040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000864	Prot_inh_pot1

Vocabulary: **Molecular Function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009611	response to wounding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding
biological_process	GO:0010951	negative regulation of endopeptidase activity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006458	MELO3C006458	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006458T1	MELO3C006458T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006458T1.cds1	MELO3C006458T1.cds1	CDS
MELO3C006458T1.cds2	MELO3C006458T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRODOM	PD002604		coord: 12..54 score: 0
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 10..72 score: 1.9
IPR000864	Proteinase inhibitor I13, potato inhibitor I	unknown	SSF54654	CI-2 family of serine protease inhibitors	coord: 7..72 score: 1.96
None	No IPR available	GENE3D	G3DSA:3.30.10.10		coord: 8..72 score: 1.1
None	No IPR available	PANTHER	PTHR33091	FAMILY NOT NAMED	coord: 10..72 score: 3.6