MELO3C006290 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006290
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein kinase C gamma type
Locationchr6 : 2273439 .. 2273750 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACAGAAATGGACAGAGGTACATTTCGAAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGTTACCTATATTGGAGAAAAATATGAATCAAATGATAGAGGAGAGACATTCCTTGCACATGATGATGAAAAAGAAGTATGGCGAACGACAGAAATATGGGATTGGGACGATACTCAAGGAGATTTCATCCAGCAAACGTACGGTTTGGAGGAGGAAGAACTGCCTCCAATTGATGATATGATAGATGGTGAGAATGATCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG

mRNA sequence

ATGATACAGAAATGGACAGAGGTACATTTCGAAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGTTACCTATATTGGAGAAAAATATGAATCAAATGATAGAGGAGAGACATTCCTTGCACATGATGATGAAAAAGAAGTATGGCGAACGACAGAAATATGGGATTGGGACGATACTCAAGGAGATTTCATCCAGCAAACGTACGGTTTGGAGGAGGAAGAACTGCCTCCAATTGATGATATGATAGATGGTGAGAATGATCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG

Coding sequence (CDS)

ATGATACAGAAATGGACAGAGGTACATTTCGAAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGTTACCTATATTGGAGAAAAATATGAATCAAATGATAGAGGAGAGACATTCCTTGCACATGATGATGAAAAAGAAGTATGGCGAACGACAGAAATATGGGATTGGGACGATACTCAAGGAGATTTCATCCAGCAAACGTACGGTTTGGAGGAGGAAGAACTGCCTCCAATTGATGATATGATAGATGGTGAGAATGATCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG

Protein sequence

MIQKWTEVHFEATEAEIGGMSKNMVTYIGEKYESNDRGETFLAHDDEKEVWRTTEIWDWDDTQGDFIQQTYGLEEEELPPIDDMIDGENDLKRRKLSQQFSLY*
Homology
[Close]
BLAST of MELO3C006290 vs. TrEMBL
Match: A0A0A0L4L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129650 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 74/103 (71.84%), Postives = 79/103 (76.70%), Query Frame = 1 

Query: 1   MIQKWTEVHFEATEAEIGGMSKNMVTYIGEKYESNDRGETFLAHDDEKEVWRTTEIWDWD 60
           M QKWTEVH  ATEAEIGGMSKNM T  G+KYE+NDRG+ F+AHDDE EVW+TT IW   
Sbjct: 1   MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIW--- 60

Query: 61  DTQGDFIQQTYGLEEEELPPIDDMIDGENDLKRRKLSQQFSLY 104
                   QT GLEEEELPPIDDMID  N LKRRKLSQQFSLY
Sbjct: 61  --------QTGGLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 92

[Close]
BLAST of MELO3C006290 vs. NCBI nr
Match: gi|700201575|gb|KGN56708.1| (hypothetical protein Csa_3G129650 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32
Identity = 74/103 (71.84%), Postives = 79/103 (76.70%), Query Frame = 1 

Query: 1   MIQKWTEVHFEATEAEIGGMSKNMVTYIGEKYESNDRGETFLAHDDEKEVWRTTEIWDWD 60
           M QKWTEVH  ATEAEIGGMSKNM T  G+KYE+NDRG+ F+AHDDE EVW+TT IW   
Sbjct: 1   MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIW--- 60

Query: 61  DTQGDFIQQTYGLEEEELPPIDDMIDGENDLKRRKLSQQFSLY 104
                   QT GLEEEELPPIDDMID  N LKRRKLSQQFSLY
Sbjct: 61  --------QTGGLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 92

The following BLAST results are available for this feature:
BLAST of MELO3C006290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4L5_CUCSA2.0e-3271.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129650 PE=4 SV=1[more]
BLAST of MELO3C006290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201575|gb|KGN56708.1|2.9e-3271.84hypothetical protein Csa_3G129650 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48059melon EST collection version 4.0transcribed_cluster
MU62283melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006290T1MELO3C006290T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48059MU48059transcribed_cluster
MU62283MU62283transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006290Csa3G129650Cucumber (Chinese Long) v2cumeB236
MELO3C006290CSPI03G10570Wild cucumber (PI 183967)cpimeB230
MELO3C006290CsGy3G010650Cucumber (Gy14) v2cgybmeB200
MELO3C006290CsaV3_3G010710Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006290Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006290Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006290Silver-seed gourdcarmeB0236
MELO3C006290Silver-seed gourdcarmeB0941
MELO3C006290Silver-seed gourdcarmeB1050
MELO3C006290Watermelon (97103) v2mewmbB434
MELO3C006290Watermelon (97103) v2mewmbB448
MELO3C006290Wax gourdmewgoB531
MELO3C006290Cucumber (Gy14) v1cgymeB439
MELO3C006290Cucurbita maxima (Rimu)cmameB242
MELO3C006290Cucurbita maxima (Rimu)cmameB343
MELO3C006290Cucurbita maxima (Rimu)cmameB763
MELO3C006290Cucurbita moschata (Rifu)cmomeB230
MELO3C006290Cucurbita moschata (Rifu)cmomeB336
MELO3C006290Cucurbita moschata (Rifu)cmomeB832
MELO3C006290Cucurbita moschata (Rifu)cmomeB755
MELO3C006290Wild cucumber (PI 183967)cpimeB145
MELO3C006290Watermelon (Charleston Gray)mewcgB427
MELO3C006290Watermelon (Charleston Gray)mewcgB441
MELO3C006290Watermelon (97103) v1mewmB461
MELO3C006290Cucurbita pepo (Zucchini)cpemeB141
MELO3C006290Cucurbita pepo (Zucchini)cpemeB316
MELO3C006290Cucurbita pepo (Zucchini)cpemeB585
MELO3C006290Cucurbita pepo (Zucchini)cpemeB813