CSPI03G10570 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G10570
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 8398791 .. 8399069 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCAGAAATGGACAGAGGTACATTTGGGAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGCTACCTGTTTTGGGAAAAAATATGAAACAAATGATAGAGGAGATGCATTCGTTGCACATGATGATGAAAACGAAGTATGGCAAACGACTTTCATCTGGCAAACGGGCGGTTTGGAGGAGGAAGAACTGCCTCCGATTGATGATATGATAGATGTTGGGAATGGTCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG

mRNA sequence

ATGACGCAGAAATGGACAGAGGTACATTTGGGAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGCTACCTGTTTTGGGAAAAAATATGAAACAAATGATAGAGGAGATGCATTCGTTGCACATGATGATGAAAACGAAGTATGGCAAACGACTTTCATCTGGCAAACGGGCGGTTTGGAGGAGGAAGAACTGCCTCCGATTGATGATATGATAGATGTTGGGAATGGTCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG

Coding sequence (CDS)

ATGACGCAGAAATGGACAGAGGTACATTTGGGAGCAACTGAGGCTGAAATTGGAGGAATGAGTAAGAATATGGCTACCTGTTTTGGGAAAAAATATGAAACAAATGATAGAGGAGATGCATTCGTTGCACATGATGATGAAAACGAAGTATGGCAAACGACTTTCATCTGGCAAACGGGCGGTTTGGAGGAGGAAGAACTGCCTCCGATTGATGATATGATAGATGTTGGGAATGGTCTCAAAAGAAGGAAACTGTCACAACAGTTTTCCCTTTACTAG
Homology
[Close]
BLAST of CSPI03G10570 vs. TrEMBL
Match: A0A0A0L4L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129650 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.9e-48
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

Query: 1  MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG 60
          MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG
Sbjct: 1  MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG 60

Query: 61 GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 93
          GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY
Sbjct: 61 GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 92

[Close]
BLAST of CSPI03G10570 vs. NCBI nr
Match: gi|700201575|gb|KGN56708.1| (hypothetical protein Csa_3G129650 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 5.7e-48
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

Query: 1  MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG 60
          MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG
Sbjct: 1  MTQKWTEVHLGATEAEIGGMSKNMATCFGKKYETNDRGDAFVAHDDENEVWQTTFIWQTG 60

Query: 61 GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 93
          GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY
Sbjct: 61 GLEEEELPPIDDMIDVGNGLKRRKLSQQFSLY 92

The following BLAST results are available for this feature:
BLAST of CSPI03G10570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G10570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4L5_CUCSA3.9e-48100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129650 PE=4 SV=1[more]
BLAST of CSPI03G10570 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G10570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201575|gb|KGN56708.1|5.7e-48100.00hypothetical protein Csa_3G129650 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G10570.1CSPI03G10570.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G10570Csa3G129650Cucumber (Chinese Long) v2cpicuB120
CSPI03G10570MELO3C006290Melon (DHL92) v3.5.1cpimeB230
CSPI03G10570MELO3C006290.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G10570CsaV3_3G010710Cucumber (Chinese Long) v3cpicucB144
CSPI03G10570CsGy3G010650Cucumber (Gy14) v2cgybcpiB110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G10570Cucurbita moschata (Rifu)cmocpiB243
CSPI03G10570Cucurbita moschata (Rifu)cmocpiB353
CSPI03G10570Cucurbita moschata (Rifu)cmocpiB814
CSPI03G10570Cucurbita moschata (Rifu)cmocpiB883
CSPI03G10570Watermelon (Charleston Gray)cpiwcgB226
CSPI03G10570Watermelon (Charleston Gray)cpiwcgB255
CSPI03G10570Watermelon (97103) v1cpiwmB231
CSPI03G10570Cucurbita pepo (Zucchini)cpecpiB136
CSPI03G10570Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G10570Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G10570Bottle gourd (USVL1VR-Ls)cpilsiB149
CSPI03G10570Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G10570Silver-seed gourdcarcpiB0261
CSPI03G10570Silver-seed gourdcarcpiB0998
CSPI03G10570Silver-seed gourdcarcpiB1115
CSPI03G10570Watermelon (97103) v2cpiwmbB209
CSPI03G10570Watermelon (97103) v2cpiwmbB239
CSPI03G10570Wax gourdcpiwgoB270
CSPI03G10570Wild cucumber (PI 183967)cpicpiB063
CSPI03G10570Cucumber (Gy14) v1cgycpiB383
CSPI03G10570Cucurbita maxima (Rimu)cmacpiB255
CSPI03G10570Cucurbita maxima (Rimu)cmacpiB361
CSPI03G10570Cucurbita maxima (Rimu)cmacpiB826