MELO3C006167.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006167.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 1424697 .. 1425190 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAACACGTGTCTAAATCTTATCGGAATGCGTTTTGGACAGCTTGCTTCTGTGTAGCTACCAGCTAAGCATTAATCCAAAAAATGAAAATCCATACTTGGAAGCATCGATGAAACTTCCTCTGAGTTTGGAGTCTTGACGAATCAAATATCTCCCCGCCATGAAACCCACCGTCGATTAAATCGGCCTGGCGGCGTAGCCATTCTAGGGCTTCAAGGGCGTCATTGTAGGCAGCAGGGAGACGGTGTTCGGGGGCGAGGCGGTACTCCAAAGACATGATTAGGGCTGGAAGATGAGCGAAAATGCGGCAACAAGAAATGTGAAATGGCTGTGTGGCTGCGCTGAAGGTCTGGTGATTGAGCCATCTAGGTTTAGCTTGATGTTGAGACGCTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGATGGAGAAGAAAGTGAATGGTTTTGGTTGTGGGCTGAGAATTAG

mRNA sequence

AATAAACACGTGTCTAAATCTTATCGGAATGCGTTTTGGACAGCTTGCTTCTGTGTAGCTACCAGCTAAGCATTAATCCAAAAAATGAAAATCCATACTTGGAAGCATCGATGAAACTTCCTCTGAGTTTGGAGTCTTGACGAATCAAATATCTCCCCGCCATGAAACCCACCGTCGATTAAATCGGCCTGGCGGCGTAGCCATTCTAGGGCTTCAAGGGCGTCATTGTAGGCAGCAGGGAGACGGTGTTCGGGGGCGAGGCGGTACTCCAAAGACATGATTAGGGCTGGAAGATGAGCGAAAATGCGGCAACAAGAAATGTGAAATGGCTGTGTGGCTGCGCTGAAGGTCTGGTGATTGAGCCATCTAGGTTTAGCTTGATGTTGAGACGCTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGATGGAGAAGAAAGTGAATGGTTTTGGTTGTGGGCTGAGAATTAG

Coding sequence (CDS)

ATGAGCGAAAATGCGGCAACAAGAAATGTGAAATGGCTGTGTGGCTGCGCTGAAGGTCTGGTGATTGAGCCATCTAGGTTTAGCTTGATGTTGAGACGCTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGATGGAGAAGAAAGTGAATGGTTTTGGTTGTGGGCTGAGAATTAG

Protein sequence

MSENAATRNVKWLCGCAEGLVIEPSRFSLMLRRSKGSIMEVVEVAKRDSVIGDGEESEWFWLWAEN
Homology
[Close]
BLAST of MELO3C006167.2 vs. NCBI nr
Match: KGN56575.1 (hypothetical protein Csa_3G124930 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-16
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 19 GLVIEPSRFSLMLRRSKGSIMEVVEVAKRDSVIGDGEESEWFWLWAEN 67
          GLVI+PS FSLMLR SKGSIMEVVEVAKRDSVIGDGEESEWFW WAEN
Sbjct: 14 GLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAEN 61

[Close]
BLAST of MELO3C006167.2 vs. TrEMBL
Match: tr|A0A0A0L3R3|A0A0A0L3R3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124930 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 19 GLVIEPSRFSLMLRRSKGSIMEVVEVAKRDSVIGDGEESEWFWLWAEN 67
          GLVI+PS FSLMLR SKGSIMEVVEVAKRDSVIGDGEESEWFW WAEN
Sbjct: 14 GLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAEN 61

The following BLAST results are available for this feature:
BLAST of MELO3C006167.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56575.13.5e-1691.67hypothetical protein Csa_3G124930 [Cucumis sativus][more]
BLAST of MELO3C006167.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C006167.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C006167.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3R3|A0A0A0L3R3_CUCSA2.3e-1691.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124930 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006167.2.1MELO3C006167.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006167.2Csa3G124930Cucumber (Chinese Long) v2cumedB223
MELO3C006167.2CSPI03G09330Wild cucumber (PI 183967)cpimedB224
MELO3C006167.2CsGy3G009430Cucumber (Gy14) v2cgybmedB201
MELO3C006167.2CsaV3_3G009470Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006167.2Wax gourdmedwgoB545
MELO3C006167.2Cucumber (Gy14) v2cgybmedB352
MELO3C006167.2Cucumber (Gy14) v2cgybmedB430
MELO3C006167.2Cucumber (Gy14) v1cgymedB432
MELO3C006167.2Cucumber (Gy14) v1cgymedB499
MELO3C006167.2Cucumber (Gy14) v1cgymedB592
MELO3C006167.2Cucurbita maxima (Rimu)cmamedB273
MELO3C006167.2Cucurbita maxima (Rimu)cmamedB863
MELO3C006167.2Cucurbita maxima (Rimu)cmamedB951
MELO3C006167.2Cucurbita moschata (Rifu)cmomedB260
MELO3C006167.2Cucurbita moschata (Rifu)cmomedB857
MELO3C006167.2Cucurbita moschata (Rifu)cmomedB941
MELO3C006167.2Cucurbita pepo (Zucchini)cpemedB372
MELO3C006167.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C006167.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C006167.2Wild cucumber (PI 183967)cpimedB396
MELO3C006167.2Wild cucumber (PI 183967)cpimedB483
MELO3C006167.2Cucumber (Chinese Long) v2cumedB389
MELO3C006167.2Cucumber (Chinese Long) v2cumedB474
MELO3C006167.2Melon (DHL92) v3.6.1medmedB017
MELO3C006167.2Melon (DHL92) v3.6.1medmedB051
MELO3C006167.2Bottle gourd (USVL1VR-Ls)lsimedB035
MELO3C006167.2Bottle gourd (USVL1VR-Ls)lsimedB396
MELO3C006167.2Watermelon (Charleston Gray)medwcgB416
MELO3C006167.2Watermelon (Charleston Gray)medwcgB435
MELO3C006167.2Watermelon (97103) v1medwmB447
MELO3C006167.2Watermelon (97103) v1medwmB466
MELO3C006167.2Watermelon (97103) v1medwmB473
MELO3C006167.2Silver-seed gourdcarmedB0500
MELO3C006167.2Silver-seed gourdcarmedB0629
MELO3C006167.2Cucumber (Chinese Long) v3cucmedB405
MELO3C006167.2Cucumber (Chinese Long) v3cucmedB493
MELO3C006167.2Watermelon (97103) v2medwmbB408
MELO3C006167.2Watermelon (97103) v2medwmbB423
MELO3C006167.2Watermelon (97103) v2medwmbB439