Csa3G124930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G124930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7539571 .. 7539756 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTCTGTTGGAGGTACCGTGGAAAATAGGTTGGGTCTGGTGATTCAACCATCTGAGTTTAGCTTGATGTTGAGACACTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGACGGAGAAGAAAGTGAATGGTTTTGGTGGTGGGCTGAGAATTAG

mRNA sequence

ATGGATATTTCTGTTGGAGGTACCGTGGAAAATAGGTTGGGTCTGGTGATTCAACCATCTGAGTTTAGCTTGATGTTGAGACACTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGACGGAGAAGAAAGTGAATGGTTTTGGTGGTGGGCTGAGAATTAG

Coding sequence (CDS)

ATGGATATTTCTGTTGGAGGTACCGTGGAAAATAGGTTGGGTCTGGTGATTCAACCATCTGAGTTTAGCTTGATGTTGAGACACTCGAAAGGATCAATAATGGAGGTTGTTGAAGTTGCAAAGAGGGATTCCGTCATTGGAGACGGAGAAGAAAGTGAATGGTTTTGGTGGTGGGCTGAGAATTAG

Protein sequence

MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAEN*
Homology
[Close]
BLAST of Csa3G124930 vs. TrEMBL
Match: A0A0A0L3R3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124930 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE 60
          MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE
Sbjct: 1  MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE 60

Query: 61 N 62
          N
Sbjct: 61 N 61

[Close]
BLAST of Csa3G124930 vs. NCBI nr
Match: gi|700201442|gb|KGN56575.1| (hypothetical protein Csa_3G124930 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE 60
          MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE
Sbjct: 1  MDISVGGTVENRLGLVIQPSEFSLMLRHSKGSIMEVVEVAKRDSVIGDGEESEWFWWWAE 60

Query: 61 N 62
          N
Sbjct: 61 N 61

The following BLAST results are available for this feature:
BLAST of Csa3G124930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3R3_CUCSA2.0e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124930 PE=4 SV=1[more]
BLAST of Csa3G124930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201442|gb|KGN56575.1|2.8e-27100.00hypothetical protein Csa_3G124930 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G124930.1Csa3G124930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G124930MELO3C006167Melon (DHL92) v3.5.1cumeB236
Csa3G124930MELO3C006167.2Melon (DHL92) v3.6.1cumedB223
Csa3G124930CSPI03G09330Wild cucumber (PI 183967)cpicuB120
Csa3G124930CsGy3G009430Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G124930Bottle gourd (USVL1VR-Ls)culsiB154
Csa3G124930Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G124930Cucumber (Gy14) v2cgybcuB207
Csa3G124930Cucumber (Gy14) v2cgybcuB256
Csa3G124930Melon (DHL92) v3.6.1cumedB167
Csa3G124930Silver-seed gourdcarcuB0518
Csa3G124930Silver-seed gourdcarcuB0644
Csa3G124930Silver-seed gourdcarcuB0951
Csa3G124930Silver-seed gourdcarcuB1094
Csa3G124930Watermelon (97103) v2cuwmbB204
Csa3G124930Watermelon (97103) v2cuwmbB175
Csa3G124930Watermelon (97103) v2cuwmbB227
Csa3G124930Wax gourdcuwgoB287
Csa3G124930Cucumber (Chinese Long) v2cucuB096
Csa3G124930Cucumber (Chinese Long) v2cucuB111
Csa3G124930Cucumber (Gy14) v1cgycuB366
Csa3G124930Cucumber (Gy14) v1cgycuB432
Csa3G124930Cucumber (Gy14) v1cgycuB509
Csa3G124930Cucurbita maxima (Rimu)cmacuB253
Csa3G124930Cucurbita maxima (Rimu)cmacuB357
Csa3G124930Cucurbita maxima (Rimu)cmacuB814
Csa3G124930Cucurbita maxima (Rimu)cmacuB888
Csa3G124930Cucurbita moschata (Rifu)cmocuB239
Csa3G124930Cucurbita moschata (Rifu)cmocuB806
Csa3G124930Cucurbita moschata (Rifu)cmocuB875
Csa3G124930Melon (DHL92) v3.5.1cumeB182
Csa3G124930Watermelon (Charleston Gray)cuwcgB222
Csa3G124930Watermelon (Charleston Gray)cuwcgB242
Csa3G124930Watermelon (97103) v1cuwmB233
Csa3G124930Watermelon (97103) v1cuwmB276
Csa3G124930Cucurbita pepo (Zucchini)cpecuB135
Csa3G124930Cucurbita pepo (Zucchini)cpecuB313
Csa3G124930Cucurbita pepo (Zucchini)cpecuB609
Csa3G124930Cucurbita pepo (Zucchini)cpecuB859