MELO3C006128 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCAGTCAGATACTCGAAGGCAAATGGCTTTCATCTCTCTCTCTCCGCCCTCCATTTTTGTTCTCTCAAAAAGCTCGACGAATTCCTTTGAAATCGTCAACCAATCCCCCCCTTATTTTCCTCTAAAACAGCCCATCTTCTCCGAAATTGGAGCGGATCCATCTTCTGGTTCACAGTTCTGGACATTACCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTAATTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGTTCTTTTTTTGTTTCTGCTCTTTTCCCAAGTTCTTGTATCTCGGATCGAGAATTTCTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGGTTAGTTTCTGCGTTTGTTCTCTTTGAATTTATTTCAATTTGAAATCCCATTACTTGAATTTGGCGGATTTTATTCCAATTGTTTGTTGACGGCAGATGAGCAGCTACTCATGGATGGATGGTGTTCTGTACTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACAATTCTTCCCATTTCTCCCATCTTTTTTTGTTTGTTCCTTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGAATCACAACAGCTAAACCTTCTGAGAGGCAAAATGATCTGGTATGACTCCACTCTTTTCACTTTTCTTAGGCCAGGACAGCTACATTGTGACTAGCCAATTTTGTGTTGGATGTATCTGCAAAAGCTTGGTTGTTATTATTAGGCTGATGCAAATTTCCGAATTCATATCTAAATGTTATTAGGATAAAGTCAAATTTTGGAGGCTTCATCCAATAATTTCTCCTCCAATTCATGGTTTTGAATATACTATTCCTAATATTTTTTATAGAAACAATCTGGCCTGGGAATTCTTGCTTCTTTATGATAGTGGTTTTGTTCCTTATTTTAGAGCTTGCTCTTGAGTCCAATGGGGTTATAATATGTCATGAGGATAGGAGGGGTTTAAAGTTCCTATACTGTCATTTTATCCTCATTTCATATTTTGTAGTTTACGTCTTAGGGTTCATGAATCAAATTTAACTTTAGAAATTTCAACATTGTGCTCTCCATGCAAATGCTGTACCTTTTTGCATATTATTACAATTTTCATAACTTTTGATAGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTGTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTATGTAGTTCTTCACCCCCTCCCCCTGCCTCCTATTTTGTGTAATACATTTTTACTGTATTGTTGTTCGATTGAAACCTACTAGTCTTTAAAATGCGAAAGAAAAATATTCTGCACGGTTTTCTCTATTTGTTTGGAATGACTTTTTAAGTATTTCTAAAAGTGTTTCTAAGTGGAAAAAAATGTTCTTAACATTTTAAATGATAAGGATAATTGTAGGATATTTAGTACGTTTTAGTCAATAGTACCTTTTAATTAACATTTTATAATCAATTAGTTAATTAGCTAATTTTAGGTAATGCTTCCTCATTTCTAAGGGATGAATTTTTCATGTTTGGCCATAGATTTGGCCTAATACTTAAATCTGCTACGTCAAAATGTTATTTCAAATAGCTGATATATGGTTAGGAAAATTGAAACTGTAGTATTTTTGTTTTTGAATAGGTCACTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACGCCCCCAGCCGAACATACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAGTCTTAAAATACCTTTTCTGCTCTACCAGCACATTCGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAAACAAAAATTATTGTCTGTTTGAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTATTGTACTTGAAGACTCTATTTATGTGAGCTAGATAAACAGATCTTTCAAAGAATTGCACCTTAGTTCTGTGTTGATTGAGAAAACTGGAATAAAAAAGCAGATTTGGTGCAATTCCAAATGGTCACCAAATATATTTTAGAAAAATATGATTTACC GGGAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCAGTCAGATACTCGAAGGCAAATGGCTTTCATCTCTCTCTCTCCGCCCTCCATTTTTGTTCTCTCAAAAAGCTCGACGAATTCCTTTGAAATCGTCAACCAATCCCCCCCTTATTTTCCTCTAAAACAGCCCATCTTCTCCGAAATTGGAGCGGATCCATCTTCTGGTTCACAGTTCTGGACATTACCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTAATTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGTTCTTTTTTTGTTTCTGCTCTTTTCCCAAGTTCTTGTATCTCGGATCGAGAATTTCTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCATGGATGGATGGTGTTCTGTACTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACTAAACCTTCTGAGAGGCAAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTGTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCACTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACGCCCCCAGCCGAACATACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAGTCTTAAAATACCTTTTCTGCTCTACCAGCACATTCGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAAACAAAAATTATTGTCTGTTTGAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTATTGTACTTGAAGACTCTATTTATGTGAGCTAGATAAACAGATCTTTCAAAGAATTGCACCTTAGTTCTGTGTTGATTGAGAAAACTGGAATAAAAAAGCAGATTTGGTGCAATTCCAAATGGTCACCAAATATATTTTAGAAAAATATGATTTACC ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCATGGATGGATGGTGTTCTGTACTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACTAAACCTTCTGAGAGGCAAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTGTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCACTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACGCCCCCAGCCGAACATACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAGTCTTAA MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS*
BLAST of MELO3C006128 vs. Swiss-Prot
Match: PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.1e-83 Identity = 141/202 (69.80%), Postives = 163/202 (80.69%), Query Frame = 1
BLAST of MELO3C006128 vs. Swiss-Prot
Match: PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 6.0e-82 Identity = 141/207 (68.12%), Postives = 164/207 (79.23%), Query Frame = 1
BLAST of MELO3C006128 vs. Swiss-Prot
Match: PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.6e-81 Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 1
BLAST of MELO3C006128 vs. Swiss-Prot
Match: WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.6e-69 Identity = 116/184 (63.04%), Postives = 149/184 (80.98%), Query Frame = 1
BLAST of MELO3C006128 vs. Swiss-Prot
Match: WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67 Identity = 112/182 (61.54%), Postives = 150/182 (82.42%), Query Frame = 1
BLAST of MELO3C006128 vs. TrEMBL
Match: A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-117 Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 1
BLAST of MELO3C006128 vs. TrEMBL
Match: A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.0e-100 Identity = 173/209 (82.78%), Postives = 187/209 (89.47%), Query Frame = 1
BLAST of MELO3C006128 vs. TrEMBL
Match: A0A0S3RSW7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G084900 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.6e-92 Identity = 156/201 (77.61%), Postives = 176/201 (87.56%), Query Frame = 1
BLAST of MELO3C006128 vs. TrEMBL
Match: A0A0L9U419_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g053500 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.6e-92 Identity = 156/201 (77.61%), Postives = 176/201 (87.56%), Query Frame = 1
BLAST of MELO3C006128 vs. TrEMBL
Match: A0A0L9U419_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g053500 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16 Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 1
HSP 2 Score: 345.9 bits (886), Expect = 3.4e-92 Identity = 160/205 (78.05%), Postives = 175/205 (85.37%), Query Frame = 1
BLAST of MELO3C006128 vs. TAIR10
Match: AT1G01780.1 (AT1G01780.1 GATA type zinc finger transcription factor family protein) HSP 1 Score: 308.9 bits (790), Expect = 2.3e-84 Identity = 141/202 (69.80%), Postives = 163/202 (80.69%), Query Frame = 1
BLAST of MELO3C006128 vs. TAIR10
Match: AT3G61230.1 (AT3G61230.1 GATA type zinc finger transcription factor family protein) HSP 1 Score: 305.1 bits (780), Expect = 3.4e-83 Identity = 141/207 (68.12%), Postives = 164/207 (79.23%), Query Frame = 1
BLAST of MELO3C006128 vs. TAIR10
Match: AT2G45800.1 (AT2G45800.1 GATA type zinc finger transcription factor family protein) HSP 1 Score: 301.6 bits (771), Expect = 3.7e-82 Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 1
BLAST of MELO3C006128 vs. TAIR10
Match: AT2G39900.1 (AT2G39900.1 GATA type zinc finger transcription factor family protein) HSP 1 Score: 263.1 bits (671), Expect = 1.5e-70 Identity = 116/184 (63.04%), Postives = 149/184 (80.98%), Query Frame = 1
BLAST of MELO3C006128 vs. TAIR10
Match: AT3G55770.7 (AT3G55770.7 GATA type zinc finger transcription factor family protein) HSP 1 Score: 231.1 bits (588), Expect = 6.2e-61 Identity = 110/216 (50.93%), Postives = 148/216 (68.52%), Query Frame = 1
BLAST of MELO3C006128 vs. NCBI nr
Match: gi|659075295|ref|XP_008438068.1| (PREDICTED: pollen-specific protein SF3-like [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.0e-121 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1
BLAST of MELO3C006128 vs. NCBI nr
Match: gi|449432173|ref|XP_004133874.1| (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis sativus]) HSP 1 Score: 430.3 bits (1105), Expect = 2.0e-117 Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 1
BLAST of MELO3C006128 vs. NCBI nr
Match: gi|659075313|ref|XP_008438078.1| (PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo]) HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101 Identity = 175/208 (84.13%), Postives = 189/208 (90.87%), Query Frame = 1
BLAST of MELO3C006128 vs. NCBI nr
Match: gi|778677278|ref|XP_011650764.1| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus]) HSP 1 Score: 373.2 bits (957), Expect = 2.8e-100 Identity = 173/209 (82.78%), Postives = 187/209 (89.47%), Query Frame = 1
BLAST of MELO3C006128 vs. NCBI nr
Match: gi|659075311|ref|XP_008438077.1| (PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo]) HSP 1 Score: 372.5 bits (955), Expect = 4.9e-100 Identity = 175/209 (83.73%), Postives = 189/209 (90.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|