Cla97C05G082100 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G082100
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	LIM domain protein a
Location	Cla97Chr05 : 1592456 .. 1593989 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGGTTAGTCTTTCTATATTCAATCTCTTTTACTTATTTCAATTCCAAATCCCATCATTCGAATTTGGCGGATTTTATCCCATTAGTTTGTTTATCACAGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTCCATTTCTCCCATTTTTGTTTTTGCTTGTTCCTTTTTTACTTTTTCCTTATTTCCTGACATTCTCTCATTCCCATGGTATTGAATGACAACAGCCAAACCTTCTGAGAAGCAAAATGATCTGGTATGCTCCCACTATTTTCACTTTTCTCAGGTTAGGTCAGCCAGATTATGACTAGCAATTTTGTGTTGGATGTATGAGAGAGTAACTGCAAAAGTTTGGTTGTTATTATTAGGCGCCAAATTTTCGTATTCATACCTAATGGTTATTAGGATAAAGTCCCATTTTGGCGGCTTCATCCAATAATTTTTCCTCCAAGTCATGGTTTTGAATATACCATTCCTAATATTTTTGATAAAAACAAACTGGGCTGGGAATTCTTGTACTTGTATGATTGTGATTTTGTTTCTTATTATAGAGCTTGCTCTTGAGTCTAATGGTGATATAATATGTCATGAGAATAGGAAGCCTTTAAATTAAAATTCCTATGATATCATTTTATCCTCATTTCCATATTTGGTAGTTTATGTATTAGCAATTTCAACCTTGTGCTCTCCATGCAAATGCTGTAATTTTTGCATAGTATTACAATCTTCATTATCTTTGACAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTCTGTAGCTCTTCATCTTGTATAATAACGTTGTTACTGAATTGTTGTTTGATTGAAACCTATAAGTTGTTAAAAATGTGAAAGGAAAACTCTGTGCTTGTTTGGAATGACATTTTAAGTGTTTAGAAAATTTTTTCTAAACACTTAAAATGTCATTCCAAATAAGCTGATATATGGTTAGGGAAATTGAAATTGTATTTTTGTTGGTTCCTGAATAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAA

mRNA sequence

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAACCTTCTGAGAAGCAAAATGATCTGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCATAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAACCTTCTGAGAAGCAAAATGATCTGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCATGCCCCCGGCCGAACATGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACACGCAGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNTMPPAEHAEEDAEPQPQSEEHAVEQS

Homology

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BLAST of Cla97C05G082100 vs. NCBI nr
Match: XP_022980415.1 (LIM domain-containing protein PLIM2b-like [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-109
Identity = 190/205 (92.68%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQ++LTRTPSKLS+MFSGTQDKC+VCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHVLEAAANKKNT
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNT 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. NCBI nr
Match: XP_022924601.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 1.7e-109
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHKHCFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQ++LTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNYNHVLEAAANKKN 
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPA+ AEEDAE QPQSE+HAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 3.8e-109
Identity = 189/205 (92.20%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSE+QNDLTRTPSKLSSMF GTQDKC+VCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPAEH +EDAEP P+S E AVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. NCBI nr
Match: XP_004133874.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis sativus] >KGN56534.1 hypothetical protein Csa_3G122580 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 2.7e-107
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTK S+K NDLTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPA+H +EDAEP P+S E AVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. NCBI nr
Match: XP_022147508.1 (LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 LIM domain-containing protein PLIM2c-like [Momordica charantia])

HSP 1 Score: 377.9 bits (969), Expect = 2.2e-101
Identity = 180/206 (87.38%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNF  +KPSEKQNDLTR PSKLSSMFSGTQDKC+VC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFHASKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKN 180
           LEGECYHK CFRCAHGGC+LTHS+ AALDGVLYCKHHFAQLF+VKGNYNHVL+AAANKK 
Sbjct: 121 LEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 TMPPAEHAEEDAEPQPQSEEHAVEQS 206
           + PP E A+++AEPQ QSE+H VEQS
Sbjct: 181 STPPXEPADDEAEPQAQSEDHDVEQS 206

[Close]

BLAST of Cla97C05G082100 vs. TrEMBL
Match: tr|A0A1S3AVG8|A0A1S3AVG8_CUCME (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 2.5e-109
Identity = 189/205 (92.20%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSE+QNDLTRTPSKLSSMF GTQDKC+VCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPAEH +EDAEP P+S E AVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. TrEMBL
Match: tr|A0A0A0L6A8|A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.8e-107
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTK S+K NDLTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 180
           EGECYHKKCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 MPPAEHAEEDAEPQPQSEEHAVEQS 206
            PPA+H +EDAEP P+S E AVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cla97C05G082100 vs. TrEMBL
Match: tr|A0A0A0L4A1|A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.6e-95
Identity = 173/209 (82.78%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK C KCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  KPSEKQNDL+R PSKLSSMFSGTQDKCA C+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKN 180
           LEGECYHK CFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLF++KGNYNHVLEAAANKK 
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TMPPAEHAEED---AEPQPQSEEHAVEQS 206
                          E QPQ++E  VEQ+
Sbjct: 181 XXXXXXXXXXXXGATEAQPQADEAPVEQT 209

[Close]

BLAST of Cla97C05G082100 vs. TrEMBL
Match: tr|A0A1S3AW36|A0A1S3AW36_CUCME (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.6e-92
Identity = 171/209 (81.82%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  KPSEKQNDL+R PSKLSSMFSGTQDKCA CTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKN 180
           LEGECYHK CFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLF++KGNYNHVLEA      
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXXX 180

Query: 181 TMPPAEHAEED---AEPQPQSEEHAVEQS 206
                          E QPQ++E AVEQ+
Sbjct: 181 XXXXXXXXXXXXXATEAQPQADE-AVEQT 208

[Close]

BLAST of Cla97C05G082100 vs. TrEMBL
Match: tr|W9RX88|W9RX88_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis OX=981085 GN=L484_006564 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.9e-88
Identity = 161/213 (75.59%), Postives = 175/213 (82.16%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKAC+KTVYVVD++SLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CK 
Sbjct: 1   MAFTGTLDKCKACNKTVYVVDMMSLEGVPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT---------------------KPSEKQND-LTRTPSKLSSMF 120
           HFEQLFKESGNFSKNFQT                     K SE+QND L R PSKLSS+F
Sbjct: 61  HFEQLFKESGNFSKNFQTVFLLGLFANNNKRVGEKFVTAKSSERQNDQLARAPSKLSSLF 120

Query: 121 SGTQDKCAVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFA 180
           SGTQDKCA C+KTVYPLEKV+LEGECYHK CFRCAHGGC LTHSSYAALDGVLYCKHHF 
Sbjct: 121 SGTQDKCATCSKTVYPLEKVSLEGECYHKSCFRCAHGGCPLTHSSYAALDGVLYCKHHFQ 180

Query: 181 QLFLVKGNYNHVLEAAANKKNTMPPAEHAEEDA 192
           QLF+ KGNY+HVL+AAANKKN  PP E A++ +
Sbjct: 181 QLFMEKGNYSHVLKAAANKKNATPPPETADQSS 213

[Close]

BLAST of Cla97C05G082100 vs. Swiss-Prot
Match: sp|Q1ECF5|PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.9e-80
Identity = 144/209 (68.90%), Postives = 170/209 (81.34%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ   +EK  +LTRTPSK+SS+F GTQDKCA C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKK-- 180
           EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY HVL+AA +++  
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 --NTMPPAEHAEEDAEPQPQSEEHAVEQS 206
             NT+PP    +   E +   EE+ V +S
Sbjct: 181 SGNTLPPEPTEDVAVEAK---EENGVSES 205

[Close]

BLAST of Cla97C05G082100 vs. Swiss-Prot
Match: sp|O80839|PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.4e-78
Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQND-LTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ   +EK ND LTRTPSKLSS FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEA 174
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+YNHV +A
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQA 174

[Close]

BLAST of Cla97C05G082100 vs. Swiss-Prot
Match: sp|O04193|WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.3e-70
Identity = 119/184 (64.67%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT--KP--SEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  KP   +   +L RTPS+L+ MFSGTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAAN 180
           KVT+E +CYHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]

BLAST of Cla97C05G082100 vs. Swiss-Prot
Match: sp|Q9M047|WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68
Identity = 116/182 (63.74%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK CFKC+HCK  L +SSYS M+GVL+CK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KPSEKQN-DLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+  K ++K   +LTRTPS+++  FSGTQ+KCA C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANK 180
           VT+E + YHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

[Close]

BLAST of Cla97C05G082100 vs. Swiss-Prot
Match: sp|Q500W4|PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-67
Identity = 123/180 (68.33%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+                       TH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRXXXXXXXXXXXXXXXXXXXXXXXTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT   +EK ND T+ P++LSS FSGTQDKCA C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

[Close]

BLAST of Cla97C05G082100 vs. TAIR10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-81
Identity = 144/209 (68.90%), Postives = 170/209 (81.34%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ   +EK  +LTRTPSK+SS+F GTQDKCA C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKK-- 180
           EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY HVL+AA +++  
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 --NTMPPAEHAEEDAEPQPQSEEHAVEQS 206
             NT+PP    +   E +   EE+ V +S
Sbjct: 181 SGNTLPPEPTEDVAVEAK---EENGVSES 205

[Close]

BLAST of Cla97C05G082100 vs. TAIR10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 293.9 bits (751), Expect = 7.7e-80
Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQND-LTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ   +EK ND LTRTPSKLSS FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEA 174
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+YNHV +A
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQA 174

[Close]

BLAST of Cla97C05G082100 vs. TAIR10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-71
Identity = 119/184 (64.67%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT--KP--SEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  KP   +   +L RTPS+L+ MFSGTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAAN 180
           KVT+E +CYHK CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]

BLAST of Cla97C05G082100 vs. TAIR10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-68
Identity = 123/180 (68.33%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+                       TH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRXXXXXXXXXXXXXXXXXXXXXXXTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQNDLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT   +EK ND T+ P++LSS FSGTQDKCA C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYNHVLEAAANKKNT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

[Close]

BLAST of Cla97C05G082100 vs. TAIR10
Match: AT3G55770.7 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 116/216 (53.70%), Postives = 153/216 (70.83%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKHCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK CFKC+HCK  L +SSYS M+GVL+CK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KPSEKQN-DLTRTPSKLSSMFSGTQDKCAVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+  K ++K   +LTRTPS+++  FSGTQ+KCA C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 ----------------------------------VTLEGECYHKKCFRCAHGGCHLTHSS 180
                                             VT+E + YHK CF+C+HGGC ++ S+
Sbjct: 121 IHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSN 180

The following BLAST results are available for this feature:

BLAST of Cla97C05G082100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980415.1	1.0e-109	92.68	LIM domain-containing protein PLIM2b-like [Cucurbita maxima]	[more]
XP_022924601.1	1.7e-109	92.68	LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 L...	[more]
XP_008438068.1	3.8e-109	92.20	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]
XP_004133874.1	2.7e-107	90.73	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis sativus] >KGN56534...	[more]
XP_022147508.1	2.2e-101	87.38	LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 ...	[more]

BLAST of Cla97C05G082100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVG8\|A0A1S3AVG8_CUCME	2.5e-109	92.20	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
tr\|A0A0A0L6A8\|A0A0A0L6A8_CUCSA	1.8e-107	90.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
tr\|A0A0A0L4A1\|A0A0A0L4A1_CUCSA	4.6e-95	82.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1	[more]
tr\|A0A1S3AW36\|A0A1S3AW36_CUCME	1.6e-92	81.82	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]
tr\|W9RX88\|W9RX88_9ROSA	1.9e-88	75.59	Pollen-specific protein SF3 OS=Morus notabilis OX=981085 GN=L484_006564 PE=4 SV=...	[more]

BLAST of Cla97C05G082100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1ECF5\|PLI2B_ARATH	1.9e-80	68.90	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
sp\|O80839\|PLI2A_ARATH	1.4e-78	78.74	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
sp\|O04193\|WLI2A_ARATH	5.3e-70	64.67	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
sp\|Q9M047\|WLI2B_ARATH	1.3e-68	63.74	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
sp\|Q500W4\|PLI2C_ARATH	2.5e-67	68.33	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]

BLAST of Cla97C05G082100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01780.1	1.1e-81	68.90	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	7.7e-80	78.74	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	2.9e-71	64.67	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	1.4e-68	68.33	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	1.2e-64	53.70	GATA type zinc finger transcription factor family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0051015	actin filament binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G082100.1	Cla97C05G082100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 104..156 e-value: 2.9E-12 score: 56.7 coord: 9..61 e-value: 3.1E-11 score: 53.3
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 105..160 e-value: 3.3E-10 score: 40.0 coord: 10..65 e-value: 1.1E-11 score: 44.7
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 103..163 score: 12.147
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.167
None	No IPR available	GENE3D	G3DSA:2.10.110.10		coord: 99..169 e-value: 2.3E-18 score: 68.1 coord: 6..74 e-value: 5.2E-18 score: 67.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..205
None	No IPR available	PANTHER	PTHR24206:SF22	LIM DOMAIN-CONTAINING PROTEIN PLIM2A-RELATED	coord: 1..201
None	No IPR available	PANTHER	PTHR24206	FAMILY NOT NAMED	coord: 1..201
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 97..130
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 131..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G082100	Cla021249	Watermelon (97103) v1	wmwmbB206
Cla97C05G082100	Csa3G122580	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G082100	MELO3C006128	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G082100	ClCG05G001690	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G082100	CSPI03G08950	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G082100	CmaCh06G010930	Cucurbita maxima (Rimu)	cmawmbB856
Cla97C05G082100	CmoCh14G020810	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G082100	CmoCh06G011190	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G082100	CsGy3G009040	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G082100	MELO3C006128.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G082100	Carg24944	Silver-seed gourd	carwmbB0676
Cla97C05G082100	CsaV3_3G009070	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G082100	Bhi01G000271	Wax gourd	wgowmbB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G082100	Watermelon (97103) v2	wmbwmbB130
Cla97C05G082100	Silver-seed gourd	carwmbB0773
Cla97C05G082100	Cucumber (Gy14) v2	cgybwmbB216
Cla97C05G082100	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G082100	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G082100	Cucurbita maxima (Rimu)	cmawmbB344
Cla97C05G082100	Cucurbita maxima (Rimu)	cmawmbB429
Cla97C05G082100	Cucurbita moschata (Rifu)	cmowmbB410
Cla97C05G082100	Wild cucumber (PI 183967)	cpiwmbB232
Cla97C05G082100	Cucumber (Chinese Long) v3	cucwmbB227
Cla97C05G082100	Cucumber (Chinese Long) v2	cuwmbB226
Cla97C05G082100	Bottle gourd (USVL1VR-Ls)	lsiwmbB331
Cla97C05G082100	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G082100	Melon (DHL92) v3.6.1	medwmbB436
Cla97C05G082100	Melon (DHL92) v3.5.1	mewmbB437
Cla97C05G082100	Watermelon (Charleston Gray)	wcgwmbB231
Cla97C05G082100	Watermelon (97103) v1	wmwmbB210