MELO3C005996 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005996
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Methyl-CpG-binding domain protein 5
Location	chr6 : 477762 .. 478931 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATCTATCTTATTATTATCATCATTATTATTTTAAATTGGAATAAACTTACCTTTTTTTTAGAACTATTTTTTTTATTAATTAATTATGTCAAATCTTCCTCGTTTCGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCAGTACCGCCGCCCGCCAAGAAACTCAACCGGCCTTCACGGCGGCCACGGAGCCGGAAGTTTTTCCCTCGGCTGTACCAACCACTAATACTCTTCAAACTTCTCCCGTAAAACAAAGAACCCCTCGTCTTTCATCTCCGGTTAAAAAATTTCCCTCGCCGCCGTCTTCTCCAAAATATAGCGGCGCCACCGGCACCATTTCGCCTCGTAAACCACTATCTCCACCTTCGACGTACAACCGTCACGATGGTGAACGCCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAACCCACCTATATCTCTCCCCCACCGTCTCCGCCCAAGCCTAAACATTCTACCGCTGCCACCGTTGTTGCACCACTCTCTCCTCTGGCTCTGCCGCGATCGGAGGTGAGACGTGAACCTGAACGCTCCATTCGACCTCGGAGCCCGCCGGAGGTTAGTTAAATTAATTACCGTAAAAATTTTAGCTCACTCAATGGTCTCTCTTATACGATTATTTCATCGTAACCCATATTATAATAGATGCAACACAACCATCGATGTTTAGAGTGATAACTAATGACTTTATTTACATCCACGCTAAGCAGATCGAACAAAAAAAGATCCTTTACCAGACGACAACAACCGAGAAGCCAACGAAAACCGACTACCGGCAAACAGATCAGTATGGGACGAGTAAACCCCAGCAGAAGCAGCACCATCAGCAGCTGCAAAGTGACGTTATAAACATAAAAGGGGACAACGTAGGGGCAGTGATGCACATCACGCAATCATCTGATGGCTCGGAAATACTAAAGAAAAAGCCAAGCGTTGGACAGAGCAAGGAAAATGAAGAGAAAACAAACAAATCAAATTCAAATTTTCCAGGAAAGTCGTTTATGAACAGCAATTTTCAAGGAGTTAACAATTCTATTCTTTACAATTCTTCTTTAAGCCACCGCGATCCAGGCCTCCATCTTGCTTACAGCTCCAAGAACCCTAAACATGGCGATTCAATTCATGAGTCAAGGCACTAA

mRNA sequence

ACCATCTATCTTATTATTATCATCATTATTATTTTAAATTGGAATAAACTTACCTTTTTTTTAGAACTATTTTTTTTATTAATTAATTATGTCAAATCTTCCTCGTTTCGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCAGTACCGCCGCCCGCCAAGAAACTCAACCGGCCTTCACGGCGGCCACGGAGCCGGAAGTTTTTCCCTCGGCTGTACCAACCACTAATACTCTTCAAACTTCTCCCGTAAAACAAAGAACCCCTCGTCTTTCATCTCCGGTTAAAAAATTTCCCTCGCCGCCGTCTTCTCCAAAATATAGCGGCGCCACCGGCACCATTTCGCCTCGTAAACCACTATCTCCACCTTCGACGTACAACCGTCACGATGGTGAACGCCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAACCCACCTATATCTCTCCCCCACCGTCTCCGCCCAAGCCTAAACATTCTACCGCTGCCACCGTTGTTGCACCACTCTCTCCTCTGGCTCTGCCGCGATCGGAGGTGAGACGTGAACCTGAACGCTCCATTCGACCTCGGAGCCCGCCGGAGATCGAACAAAAAAAGATCCTTTACCAGACGACAACAACCGAGAAGCCAACGAAAACCGACTACCGGCAAACAGATCAGTATGGGACGAGTAAACCCCAGCAGAAGCAGCACCATCAGCAGCTGCAAAGTGACGTTATAAACATAAAAGGGGACAACGTAGGGGCAGTGATGCACATCACGCAATCATCTGATGGCTCGGAAATACTAAAGAAAAAGCCAAGCGTTGGACAGAGCAAGGAAAATGAAGAGAAAACAAACAAATCAAATTCAAATTTTCCAGGAAAGTCGTTTATGAACAGCAATTTTCAAGGAGTTAACAATTCTATTCTTTACAATTCTTCTTTAAGCCACCGCGATCCAGGCCTCCATCTTGCTTACAGCTCCAAGAACCCTAAACATGGCGATTCAATTCATGAGTCAAGGCACTAA

Coding sequence (CDS)

ATGTCAAATCTTCCTCGTTTCGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCAGTACCGCCGCCCGCCAAGAAACTCAACCGGCCTTCACGGCGGCCACGGAGCCGGAAGTTTTTCCCTCGGCTGTACCAACCACTAATACTCTTCAAACTTCTCCCGTAAAACAAAGAACCCCTCGTCTTTCATCTCCGGTTAAAAAATTTCCCTCGCCGCCGTCTTCTCCAAAATATAGCGGCGCCACCGGCACCATTTCGCCTCGTAAACCACTATCTCCACCTTCGACGTACAACCGTCACGATGGTGAACGCCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAACCCACCTATATCTCTCCCCCACCGTCTCCGCCCAAGCCTAAACATTCTACCGCTGCCACCGTTGTTGCACCACTCTCTCCTCTGGCTCTGCCGCGATCGGAGGTGAGACGTGAACCTGAACGCTCCATTCGACCTCGGAGCCCGCCGGAGATCGAACAAAAAAAGATCCTTTACCAGACGACAACAACCGAGAAGCCAACGAAAACCGACTACCGGCAAACAGATCAGTATGGGACGAGTAAACCCCAGCAGAAGCAGCACCATCAGCAGCTGCAAAGTGACGTTATAAACATAAAAGGGGACAACGTAGGGGCAGTGATGCACATCACGCAATCATCTGATGGCTCGGAAATACTAAAGAAAAAGCCAAGCGTTGGACAGAGCAAGGAAAATGAAGAGAAAACAAACAAATCAAATTCAAATTTTCCAGGAAAGTCGTTTATGAACAGCAATTTTCAAGGAGTTAACAATTCTATTCTTTACAATTCTTCTTTAAGCCACCGCGATCCAGGCCTCCATCTTGCTTACAGCTCCAAGAACCCTAAACATGGCGATTCAATTCATGAGTCAAGGCACTAA

Protein sequence

MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKHGDSIHESRH*

Homology

[Close]

BLAST of MELO3C005996 vs. Swiss-Prot
Match: RPB1_CAEEL (DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 63/208 (30.29%), Postives = 81/208 (38.94%), Query Frame = 1


Query: 5    PRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQ-TSPVKQRTPRL 64
            P+F  T   +S    P++ +   T PA   A +  V PS  PT+ +   TSP    T   
Sbjct: 1584 PQFSMTSPHYS----PTSPSYSPTSPA---AGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1643

Query: 65   SSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERR---TSATTSP--KTFKP 124
             SP     SP +SP YS  + + SP  P   PS+ +      R   TS T SP   T+ P
Sbjct: 1644 YSPTSPSYSP-TSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSP 1703

Query: 125  TYISPPPSPPKPKHSTAATV------VAPLSPLALPRSEVRREPERSIRPRSPPEIEQKK 184
            T  SP  SP  P +S  +         +P SP   P S        S  P SP       
Sbjct: 1704 T--SPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSP 1763

Query: 185  ILYQTTTTEKPTKTDYRQTDQYGTSKPQ 201
                ++ T  P+   Y  T   G S PQ
Sbjct: 1764 QYSPSSPTYTPSSPTYNPTSPRGFSSPQ 1781

HSP 2 Score: 51.2 bits (121), Expect = 2.3e-05
Identity = 54/197 (27.41%), Postives = 79/197 (40.10%), Query Frame = 1


Query: 20   PSTAARQETQPAF--TAATEPEVFPSAVPTTNTLQ-TSPVKQRTPRLSSPVKKFPSP--- 79
            P++ +   T P++  T+ +     PS  PT+ +   +SP    +    SP     SP   
Sbjct: 1625 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSP 1684

Query: 80   ---PSSPKYSGATGTISPRKPLSPPS--TYNRHDGERRTSATTSPK--TFKPTYISPPPS 139
               P+SP YS  + T SP  P   P+  +Y    G   +S   SP   T+ PT  SP  S
Sbjct: 1685 TYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPT--SPSYS 1744

Query: 140  PPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQ-TTTTEKPTK 199
            P  P++S  +   +P SP   P S        S R  S P+       Y  T+ +  P+ 
Sbjct: 1745 PTSPQYSPTSPQYSPSSPTYTPSSPTYN--PTSPRGFSSPQYSPTSPTYSPTSPSYTPSS 1804

Query: 200  TDYRQTDQYGTSKPQQK 203
              Y  T    T  P ++
Sbjct: 1805 PQYSPTSPTYTPSPSEQ 1817

HSP 3 Score: 36.6 bits (83), Expect = 5.9e-01
Identity = 31/96 (32.29%), Postives = 43/96 (44.79%), Query Frame = 1


Query: 5    PRFGRTWNRFSSLPR--PSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQR-TP 64
            P +  T  R  S P+  P++     T P++T ++     P   PT+ T   SP +Q  T 
Sbjct: 1767 PTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSS-----PQYSPTSPTYTPSPSEQPGTS 1826

Query: 65   RLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPST 98
               SP     SP SSP YS A+ + SP  P   P++
Sbjct: 1827 AQYSPTSPTYSP-SSPTYSPASPSYSPSSPTYDPNS 1856

[Close]

BLAST of MELO3C005996 vs. Swiss-Prot
Match: AGP19_ARATH (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-07
Identity = 48/136 (35.29%), Postives = 57/136 (41.91%), Query Frame = 1


Query: 15  SSLPRPSTAARQETQPAFTAATEPEVF---PSAVPTTN---TLQTSPVKQRTPRLSSPVK 74
           ++ P P+TAA   T       T P V    P A P T       TSP   +   + SP  
Sbjct: 36  TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPAT 95

Query: 75  KFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPP 134
             P PP SP  S    T+SP  P+SPP             A TSP    PT  SPPP+P 
Sbjct: 96  PPPQPPQSPPASAP--TVSP-PPVSPP------------PAPTSP---PPTPASPPPAPA 153

Query: 135 KPKHSTAATVVAPLSP 145
            P  + A+   AP+SP
Sbjct: 156 SPPPAPASPPPAPVSP 153

[Close]

BLAST of MELO3C005996 vs. Swiss-Prot
Match: RPB1_CAEBR (DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis briggsae GN=rpb-1 PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 53/194 (27.32%), Postives = 75/194 (38.66%), Query Frame = 1


Query: 20   PSTAARQETQPAFTAATEPEVFPSAVPTTNTLQ-TSPVKQRTPRLSSPVKKFPSP----- 79
            P++ +   T P+++  +     PS  PT+ +   TSP    T    SP     SP     
Sbjct: 1618 PTSPSYSPTSPSYSPTS-----PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677

Query: 80   -PSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATT------SPKTFKPTYISPPPS 139
             PSSP+YS  + T SP  P   P++          S T+      SP + K +  SP  S
Sbjct: 1678 SPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYS 1737

Query: 140  PPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKT 199
            P  P +S  +   +P SP   P S        +  P SP      +    T+ T  PT  
Sbjct: 1738 PTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQ-YSPTSPTYSPTSP 1797

HSP 2 Score: 53.1 bits (126), Expect = 6.1e-06
Identity = 60/205 (29.27%), Postives = 78/205 (38.05%), Query Frame = 1


Query: 5    PRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQ-TSPVKQRTPRL 64
            P F  T   +S    P++ +   T PA     +  V PS  PT+ +   TSP    T   
Sbjct: 1583 PGFSMTSPHYS----PTSPSYSPTSPAHHG--QSPVSPSYSPTSPSYSPTSPSYSPTSPS 1642

Query: 65   SSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERR---TSATTSP--KTFKP 124
             SP     SP +SP YS  + + SP  P   P++ +      R   TS T SP   T+ P
Sbjct: 1643 YSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSP 1702

Query: 125  TYISPPPSPPKPKHSTAATV---VAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILY 184
            T  SP  SP  P +S  +      +P SP   P S        S  P SP          
Sbjct: 1703 T--SPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1762

Query: 185  QTTTTEKPTKTDYRQTDQYGTSKPQ 201
             ++ T  P+   Y  T     S PQ
Sbjct: 1763 PSSPTYTPSSPTYNPTSPRAFSSPQ 1778

HSP 3 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 57/194 (29.38%), Postives = 75/194 (38.66%), Query Frame = 1


Query: 20   PSTAARQETQPAFTAATEPEVFPSAV---PTTNTLQ-TSPVKQRTPRLSSPVKKFPSP-- 79
            P++ +   T P+++  T P   PS+    PT+ T   TSP    T    SP     SP  
Sbjct: 1653 PTSPSYSPTSPSYSP-TSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTS 1712

Query: 80   -------PSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPS 139
                   PSSPKYS ++ T SP  P   P               TSP+ + PT  SP  S
Sbjct: 1713 PSYEGYSPSSPKYSPSSPTYSPTSPSYSP---------------TSPQ-YSPT--SPQYS 1772

Query: 140  PPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKT 199
            P  P ++ ++    P SP A   S        +  P SP           T+ T  P+  
Sbjct: 1773 PSSPTYTPSSPTYNPTSPRAF-SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPA 1826

[Close]

BLAST of MELO3C005996 vs. Swiss-Prot
Match: PLRX4_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=PEX4 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 43/133 (32.33%), Postives = 58/133 (43.61%), Query Frame = 1


Query: 18  PRPSTAARQETQPAFTAATEPEVFPSAVPTT-----NTLQTSPVKQRTPRLSSPVKKFPS 77
           P P+T   + T       T P   PS VPTT     + + T+PV + +P L++PV K PS
Sbjct: 430 PVPTTPVHKPTP----VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDK-PS 489

Query: 78  P-PSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPPKPK 137
           P PS P          P++   P   Y++    +R S   +P    P  +  PP PP P 
Sbjct: 490 PVPSRPVQKPQ----PPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPV 549

Query: 138 HSTAATVVAPLSP 145
           HS    V +P  P
Sbjct: 550 HSPPPPVHSPPPP 553

[Close]

BLAST of MELO3C005996 vs. Swiss-Prot
Match: RPB1_CRIGR (DNA-directed RNA polymerase II subunit RPB1 (Fragment) OS=Cricetulus griseus GN=POLR2A PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.0e-06
Identity = 52/154 (33.77%), Postives = 64/154 (41.56%), Query Frame = 1


Query: 20  PSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPSP------ 79
           PS+ +   T P +T  T P   PS+   T    TSP    T    SP     SP      
Sbjct: 324 PSSPSYSPTSPKYTP-TSPSYSPSSPEYT---PTSPKYSPTSPKYSPTSPKYSPTSPTYS 383

Query: 80  PSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPPKPKHS 139
           P++PKYS  + T SP  P+  P T  ++     T + TSPK + PT  SP  SP  PK S
Sbjct: 384 PTTPKYSPTSPTYSPTSPVYTP-TSPKYSPTSPTYSPTSPK-YSPT--SPTYSPTSPKGS 443

Query: 140 TAATVVAPLSPLALPRSEVRREPERSIRPRSPPE 168
           T     +P SP   P S        +I P    E
Sbjct: 444 T----YSPTSPGYSPTSPTYSLTSPAISPDDSDE 465

HSP 2 Score: 41.2 bits (95), Expect = 2.4e-02
Identity = 42/140 (30.00%), Postives = 56/140 (40.00%), Query Frame = 1


Query: 5   PRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQ-TSPVKQRTPRL 64
           P++  T  ++S    P++     T P ++  T     P   PT+ T   TSPV   T   
Sbjct: 355 PKYSPTSPKYS----PTSPKYSPTSPTYSPTT-----PKYSPTSPTYSPTSPVYTPTSPK 414

Query: 65  SSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPK--TFKPTYI 124
            SP     SP +SPKYS  + T SP                      TSPK  T+ PT  
Sbjct: 415 YSPTSPTYSP-TSPKYSPTSPTYSP----------------------TSPKGSTYSPT-- 460

Query: 125 SPPPSPPKPKHSTAATVVAP 142
           SP  SP  P +S  +  ++P
Sbjct: 475 SPGYSPTSPTYSLTSPAISP 460

[Close]

BLAST of MELO3C005996 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.0e-153
Identity = 270/310 (87.10%), Postives = 287/310 (92.58%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60
           MSNLPRFGR WNRFSSLPRP TA R E QP FTAATEPEVFPSAVPTTNT QTSP+KQRT
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQP-FTAATEPEVFPSAVPTTNTFQTSPIKQRT 60

Query: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120
           PRLSSPVKKF SPPSSPKYSGA GT+SPRKPLSPP  +NR++GERRTSATTSPKTFKPT+
Sbjct: 61  PRLSSPVKKFSSPPSSPKYSGA-GTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTH 120

Query: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT 180
           ISPPPSP KP+HST  T VAPLSPLALPRS+VRREPE S+RPRSPPEIEQKKILYQTTTT
Sbjct: 121 ISPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTT 180

Query: 181 EKPTKTD-YRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKK 240
           EKPTKTD YRQ D+YG SKPQQKQ HQQLQSDVINIKG+NVGAVMHITQSSDGSE++KKK
Sbjct: 181 EKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEVIKKK 240

Query: 241 PSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPK 300
           P+VGQSKENEEKTNKSNSN+PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLA+ SK  K
Sbjct: 241 PTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFGSKKSK 300

Query: 301 HGDSIHESRH 310
           HGDSIH+SRH
Sbjct: 301 HGDSIHDSRH 308

[Close]

BLAST of MELO3C005996 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 118/303 (38.94%), Postives = 156/303 (51.49%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEP--EVFPSAVPTTNTLQTSPVKQ 60
           M+NLPR GRT  R SS+P P  AA Q        A EP  E  P A   T     SP ++
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQP-------AVEPKYETMPYATSITTPAPASPRRE 60

Query: 61  RTPRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKP 120
               LSSP KK  SP +S   S        +   SPP +      ERR   TT P T   
Sbjct: 61  SPRPLSSPSKKATSPFASRVDSSPAA----KATRSPPDSIGDKYLERRNGETTPPLT--- 120

Query: 121 TYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTT 180
                 P+  +P  ++      PLSPLALPRS+V      + +PR  PE+E K I+Y   
Sbjct: 121 ------PAKSRPAKTS------PLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKA 180

Query: 181 TTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDG----SE 240
             EKP+K++ RQ++ +G+ K     H +Q +  V+ +KG NVGAVM + +SS G     E
Sbjct: 181 ADEKPSKSN-RQSE-HGSGK---SVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGE 240

Query: 241 ILKKKPSVGQSKEN----EEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLH 294
            LKKK +      +    E+K        P  +FMNSNFQ VNNS+L++SS  HRDPGLH
Sbjct: 241 TLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLH 272

[Close]

BLAST of MELO3C005996 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 108/308 (35.06%), Postives = 151/308 (49.03%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60
           M+NLPR+GR W R S++ R +  A Q  Q       EPE+ P A PT  TLQ  P +   
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQEP-----EPEILPLA-PTIQTLQ--PFEPTP 60

Query: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120
           P  ++P    P  P+            PR  +SPP+   +++      A+   K  +   
Sbjct: 61  PAAAAPPSSTPGEPT------------PR--ISPPAASPKYEATVIREASPPLKPARSPP 120

Query: 121 ISPPPSPPKPKHSTAA-TVVAPLSP-------LALPRSEVRREPERSIRPRSPPEIEQKK 180
           +SPP     P+HS +  +   PL P       LALP+S        +I+P    E+EQK 
Sbjct: 121 VSPPRKSVDPRHSISPNSYQEPLKPTRPSLSTLALPKSADVTTVPSAIKP----EVEQK- 180

Query: 181 ILYQTTTTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSD- 240
                  T+   K+D RQ D      P        LQ+  IN+ GDN+GAVM I Q SD 
Sbjct: 181 -------TDSFKKSD-RQVDNVSAKPPPS------LQAKAINLTGDNIGAVMKINQFSDK 240

Query: 241 --GSEILKK-KPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPG 297
             G E+ +K +   G  +EN+ + ++  + FP     NSNFQ VNNS++YNSS S RDPG
Sbjct: 241 ISGGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPG 266

[Close]

BLAST of MELO3C005996 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.3e-26
Identity = 89/240 (37.08%), Postives = 124/240 (51.67%), Query Frame = 1


Query: 85  TISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY-ISPPPSPPKPKHSTAATVVAPLS 144
           ++ PR   SPP    R D +        P    PTY I    SPP      A       S
Sbjct: 46  SLEPRS--SPPRVALRRDDQ--------PLPASPTYSIKKATSPPSSPSYRAPAARGISS 105

Query: 145 PLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKTDYRQTDQYGTSKPQQKQ 204
           P        + +P  + +PRSP E +QK  ++  +T EK TK+D     +Y  S      
Sbjct: 106 PTKTVDEYPKYKP--NTQPRSP-EAKQKPGIFHKSTVEKVTKSD-----RYHESSKTLSS 165

Query: 205 HHQQLQSDVINIKGDNVGAVMHITQSS--DGSEILKKKPSVGQ---------SKENEEKT 264
           H  QLQ + INIKG+NVGAVM I +SS  +G  ++KK     +         + +N E +
Sbjct: 166 HKGQLQPNAINIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNEAS 225

Query: 265 NKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNP---KHGDSIHESRH 310
              NS+ P  +F+NSNFQ VNNS+LYN++L+HRDPGLHLA+ S+NP   + G   H+ +H
Sbjct: 226 KAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAF-SRNPTGERSGVDDHKKQH 266

[Close]

BLAST of MELO3C005996 vs. TrEMBL
Match: A0A0L9VEB4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g165800 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 112/354 (31.64%), Postives = 162/354 (45.76%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSL--------PRPSTAARQETQ-----PAFTAATEPEVFPSAVPT 60
           M+N P   R W R +S+        P P+    QE +     PAF  A+ P   P + PT
Sbjct: 1   MANPPPV-RPWFRLASIRSTPAAPAPAPAPTPTQEPRITLGLPAFRTASAPSS-PQSHPT 60

Query: 61  TNTLQTSPVKQRTPRLSSPVKKFPSP--PSSPKYSGATGTISPRKPLSPPSTYNRHDGER 120
               Q+ P     P  SS   +F S   P+SP +     T SP     P S+  ++    
Sbjct: 61  QPQPQSQP--HPAPEPSSQPNRFSSSSLPNSPVHKAILTTSSP-----PRSSPEKNSRVH 120

Query: 121 RTSATTSPKTFKPTYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSP 180
            +S T SPKT K +  SP  SP     + + T+  P SPL LP S+++ EP+   +P   
Sbjct: 121 VSSPTHSPKTIKQSDRSPMRSP-----NNSRTITPPPSPLTLPPSQLKTEPKIPEQPEPK 180

Query: 181 PEIEQKKI----LYQTTTTEKPTKTDYRQTDQYGT---SKPQQKQHHQQLQSD------V 240
             + QK I     +    TE      +    ++ T   S+ ++K  H++L         V
Sbjct: 181 TVLVQKTIDRPRPWHNGATETHKNNAHAHHGKHVTGKESESKEKGIHKKLSDSEDSGMRV 240

Query: 241 INIKGDNVGAVMHITQS--SDGSEILKKK----------PSVGQS-----KENEEKTNKS 300
           I I G+N GA M + QS     S+ L KK           S G S     K+++ +  K+
Sbjct: 241 ITIAGENRGAFMELIQSPKKPESKYLHKKGNSSISVDGVESEGSSAEEGNKKDKNQKGKT 300

Query: 301 NSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKHGDSIHESRH 310
            S+FP  ++MNSN Q VNNS+LYN+S SH DPG+ L+ S K    G+  H   H
Sbjct: 301 TSSFPMAAYMNSNVQCVNNSLLYNTSCSHHDPGVRLSLSKK--PFGEGFHLKEH 338

[Close]

BLAST of MELO3C005996 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24
Identity = 99/334 (29.64%), Postives = 138/334 (41.32%), Query Frame = 1


Query: 19  RPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPSPPSSPK 78
           +P T  RQ+  P  T+  +      + P+ +    +P K  TP    P   + SPPS  +
Sbjct: 72  QPLTPPRQKAPP--TSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYTSPPSPKE 131

Query: 79  YSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPPKPKHSTAATV 138
              A   + PRKP SPPS  +      R++ + S KT  P+        P P+       
Sbjct: 132 VQEA---LPPRKPNSPPSPAH----SSRSTTSESVKTRSPSESENHRKAPSPR------- 191

Query: 139 VAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKTDYRQTDQYGTSK 198
              LSP +LP S +  E E +   ++    E+    ++T    +    DY Q   Y  + 
Sbjct: 192 --VLSPYSLPASLLHSERETT--QKNILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNH 251

Query: 199 PQ-----------QKQHHQQLQSD--------VINIKGDNVGAVMHITQSSDGSE----- 258
                        +K H Q   SD        VI I G+N GAVM I +S  G++     
Sbjct: 252 SYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSG 311

Query: 259 ----------------ILKKKPSVGQSKENEEKT-----NKSNSNFPGKSFMNSNFQGVN 308
                           +     S     E ++KT     NK NSN P K+FMNSN Q +N
Sbjct: 312 THSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNSNVQMIN 371

[Close]

BLAST of MELO3C005996 vs. TAIR10
Match: AT1G68725.1 (AT1G68725.1 arabinogalactan protein 19)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 48/136 (35.29%), Postives = 57/136 (41.91%), Query Frame = 1


Query: 15  SSLPRPSTAARQETQPAFTAATEPEVF---PSAVPTTN---TLQTSPVKQRTPRLSSPVK 74
           ++ P P+TAA   T       T P V    P A P T       TSP   +   + SP  
Sbjct: 36  TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPAT 95

Query: 75  KFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPP 134
             P PP SP  S    T+SP  P+SPP             A TSP    PT  SPPP+P 
Sbjct: 96  PPPQPPQSPPASAP--TVSP-PPVSPP------------PAPTSP---PPTPASPPPAPA 153

Query: 135 KPKHSTAATVVAPLSP 145
            P  + A+   AP+SP
Sbjct: 156 SPPPAPASPPPAPVSP 153

[Close]

BLAST of MELO3C005996 vs. TAIR10
Match: AT4G33970.1 (AT4G33970.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-08
Identity = 43/133 (32.33%), Postives = 58/133 (43.61%), Query Frame = 1


Query: 18  PRPSTAARQETQPAFTAATEPEVFPSAVPTT-----NTLQTSPVKQRTPRLSSPVKKFPS 77
           P P+T   + T       T P   PS VPTT     + + T+PV + +P L++PV K PS
Sbjct: 430 PVPTTPVHKPTP----VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDK-PS 489

Query: 78  P-PSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSPPKPK 137
           P PS P          P++   P   Y++    +R S   +P    P  +  PP PP P 
Sbjct: 490 PVPSRPVQKPQ----PPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPV 549

Query: 138 HSTAATVVAPLSP 145
           HS    V +P  P
Sbjct: 550 HSPPPPVHSPPPP 553

[Close]

BLAST of MELO3C005996 vs. TAIR10
Match: AT4G00890.1 (AT4G00890.1 proline-rich family protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-06
Identity = 69/285 (24.21%), Postives = 107/285 (37.54%), Query Frame = 1


Query: 17  LPRPSTAARQETQPAF----TAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPS 76
           +P P  A    + P+     T   E +  P  +P+ +  +T   + R+P +S       S
Sbjct: 174 IPPPQEAKTPPSSPSMMLNATEEFESQPKPPLLPSKSIDET---RLRSPLMSQA----SS 233

Query: 77  PPSSPKYS-GATGTISPRKPLSPPSTYNRHDGERRTSATT----SPKTFKPTYISPPPSP 136
           PP  P  S     T S   P+SPP +  +   +  +S +     SPK  +      P  P
Sbjct: 234 PPPLPSKSIDENETRSQSPPISPPKSDKQARSQTHSSPSPPPLLSPKASENHQSKSPMPP 293

Query: 137 PKPKHSTAATVVAPL-SPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTTEKPTKT 196
           P P   TA   ++ L SP+  P +     P     P S P       L QTT + KP+  
Sbjct: 294 PSP---TAQISLSSLKSPIPSPATITAPPP-----PFSSP-------LSQTTPSPKPSLP 353

Query: 197 DYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKPSVGQSK 256
              + +Q  +  P+          +   +K D              + ++ K P+  +  
Sbjct: 354 QI-EPNQIKSPSPKLTNTESHASPEQNLVKPD--------------ANLMNKIPAKNEVP 413

Query: 257 ENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHL 292
           +N     K         F+NSN QG N S+  +SS     PG+HL
Sbjct: 414 KNRGTLEKKTEPMI-MMFINSNVQGFNTSLSLDSSSIDHKPGVHL 420

[Close]

BLAST of MELO3C005996 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 630.9 bits (1626), Expect = 1.1e-177
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60
           MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT
Sbjct: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60

Query: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120
           PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY
Sbjct: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120

Query: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT 180
           ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT
Sbjct: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT 180

Query: 181 EKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKP 240
           EKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKP
Sbjct: 181 EKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKP 240

Query: 241 SVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKH 300
           SVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKH
Sbjct: 241 SVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKH 300

Query: 301 GDSIHESRH 310
           GDSIHESRH
Sbjct: 301 GDSIHESRH 309

[Close]

BLAST of MELO3C005996 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 1.5e-153
Identity = 270/310 (87.10%), Postives = 287/310 (92.58%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60
           MSNLPRFGR WNRFSSLPRP TA R E QP FTAATEPEVFPSAVPTTNT QTSP+KQRT
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQP-FTAATEPEVFPSAVPTTNTFQTSPIKQRT 60

Query: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120
           PRLSSPVKKF SPPSSPKYSGA GT+SPRKPLSPP  +NR++GERRTSATTSPKTFKPT+
Sbjct: 61  PRLSSPVKKFSSPPSSPKYSGA-GTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTH 120

Query: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT 180
           ISPPPSP KP+HST  T VAPLSPLALPRS+VRREPE S+RPRSPPEIEQKKILYQTTTT
Sbjct: 121 ISPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTT 180

Query: 181 EKPTKTD-YRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKK 240
           EKPTKTD YRQ D+YG SKPQQKQ HQQLQSDVINIKG+NVGAVMHITQSSDGSE++KKK
Sbjct: 181 EKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEVIKKK 240

Query: 241 PSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPK 300
           P+VGQSKENEEKTNKSNSN+PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLA+ SK  K
Sbjct: 241 PTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFGSKKSK 300

Query: 301 HGDSIHESRH 310
           HGDSIH+SRH
Sbjct: 301 HGDSIHDSRH 308

[Close]

BLAST of MELO3C005996 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 4.5e-41
Identity = 127/309 (41.10%), Postives = 166/309 (53.72%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEP--EVFPSAVPTTNTLQTSPVKQ 60
           M+NLPRFGR   R  ++P P  AA Q        A EP  ++ P A   T     SP ++
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQP-------AVEPRYQILPFATTITTPAPASPRRE 60

Query: 61  RTPRLSSPVKKFPSPPSSPKYSGATGTISPRKP-----LSPPSTYNRHDGERRTSATTSP 120
               LSSP KK  SP +SPKY G + T   R P     +SPP +      ERR   TT  
Sbjct: 61  SPRPLSSPPKKATSPFASPKY-GDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETT-- 120

Query: 121 KTFKPTYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKI 180
                    PP SP K + +       PLSPLALPR++V      + +PR  PE+E K I
Sbjct: 121 ---------PPLSPAKSRRAKTP----PLSPLALPRNQVFTGNGTTAQPRVQPEVETKGI 180

Query: 181 LYQTTTTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDG- 240
           +Y  T  EKP+K++ R + +YG+SK  QK+     + +VI +KG NVGAVM I +SS G 
Sbjct: 181 VYNKTV-EKPSKSN-RSSGEYGSSKSHQKKQ----KPEVIKLKGHNVGAVMEINKSSTGY 240

Query: 241 ---SEILKKKPS--VGQSK---ENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSH 294
               E LKK  +  VG        ++KT       P  +FMNSNFQ VNNS+L++SS +H
Sbjct: 241 RLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNH 280

[Close]

BLAST of MELO3C005996 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36
Identity = 118/303 (38.94%), Postives = 156/303 (51.49%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEP--EVFPSAVPTTNTLQTSPVKQ 60
           M+NLPR GRT  R SS+P P  AA Q        A EP  E  P A   T     SP ++
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQP-------AVEPKYETMPYATSITTPAPASPRRE 60

Query: 61  RTPRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKP 120
               LSSP KK  SP +S   S        +   SPP +      ERR   TT P T   
Sbjct: 61  SPRPLSSPSKKATSPFASRVDSSPAA----KATRSPPDSIGDKYLERRNGETTPPLT--- 120

Query: 121 TYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTT 180
                 P+  +P  ++      PLSPLALPRS+V      + +PR  PE+E K I+Y   
Sbjct: 121 ------PAKSRPAKTS------PLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKA 180

Query: 181 TTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDG----SE 240
             EKP+K++ RQ++ +G+ K     H +Q +  V+ +KG NVGAVM + +SS G     E
Sbjct: 181 ADEKPSKSN-RQSE-HGSGK---SVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGE 240

Query: 241 ILKKKPSVGQSKEN----EEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLH 294
            LKKK +      +    E+K        P  +FMNSNFQ VNNS+L++SS  HRDPGLH
Sbjct: 241 TLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLH 272

[Close]

BLAST of MELO3C005996 vs. NCBI nr
Match: gi|778676797|ref|XP_011650663.1| (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29
Identity = 108/308 (35.06%), Postives = 151/308 (49.03%), Query Frame = 1


Query: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60
           M+NLPR+GR W R S++ R +  A Q  Q       EPE+ P A PT  TLQ  P +   
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQEP-----EPEILPLA-PTIQTLQ--PFEPTP 60

Query: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120
           P  ++P    P  P+            PR  +SPP+   +++      A+   K  +   
Sbjct: 61  PAAAAPPSSTPGEPT------------PR--ISPPAASPKYEATVIREASPPLKPARSPP 120

Query: 121 ISPPPSPPKPKHSTAA-TVVAPLSP-------LALPRSEVRREPERSIRPRSPPEIEQKK 180
           +SPP     P+HS +  +   PL P       LALP+S        +I+P    E+EQK 
Sbjct: 121 VSPPRKSVDPRHSISPNSYQEPLKPTRPSLSTLALPKSADVTTVPSAIKP----EVEQK- 180

Query: 181 ILYQTTTTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSD- 240
                  T+   K+D RQ D      P        LQ+  IN+ GDN+GAVM I Q SD 
Sbjct: 181 -------TDSFKKSD-RQVDNVSAKPPPS------LQAKAINLTGDNIGAVMKINQFSDK 240

Query: 241 --GSEILKK-KPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPG 297
             G E+ +K +   G  +EN+ + ++  + FP     NSNFQ VNNS++YNSS S RDPG
Sbjct: 241 ISGGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPG 266

The following BLAST results are available for this feature:

BLAST of MELO3C005996 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPB1_CAEEL	1.9e-07	30.29	DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis elegans GN=ama-1 P...	[more]
AGP19_ARATH	9.5e-07	35.29	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=...	[more]
RPB1_CAEBR	1.2e-06	27.32	DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis briggsae GN=rpb-1 ...	[more]
PLRX4_ARATH	1.2e-06	32.33	Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thali...	[more]
RPB1_CRIGR	8.0e-06	33.77	DNA-directed RNA polymerase II subunit RPB1 (Fragment) OS=Cricetulus griseus GN=...	[more]

BLAST of MELO3C005996 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5T3_CUCSA	1.0e-153	87.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1	[more]
A0A0A0L320_CUCSA	1.0e-36	38.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1	[more]
A0A0A0L8G8_CUCSA	1.2e-29	35.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1	[more]
A0A0A0L3R5_CUCSA	8.3e-26	37.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1	[more]
A0A0L9VEB4_PHAAN	1.0e-23	31.64	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g165800 PE=4 SV=1	[more]

BLAST of MELO3C005996 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	1.4e-24	29.64	unknown protein	[more]
AT1G68725.1	5.3e-08	35.29	arabinogalactan protein 19	[more]
AT4G33970.1	7.0e-08	32.33	Leucine-rich repeat (LRR) family protein	[more]
AT4G00890.1	3.8e-06	24.21	proline-rich family protein	[more]

BLAST of MELO3C005996 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074888\|ref\|XP_008437849.1\|	1.1e-177	100.00	PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me...	[more]
gi\|449432016\|ref\|XP_004133796.1\|	1.5e-153	87.10	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]	[more]
gi\|659074890\|ref\|XP_008437851.1\|	4.5e-41	41.10	PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]	[more]
gi\|449432018\|ref\|XP_004133797.1\|	1.5e-36	38.94	PREDICTED: atherin-like [Cucumis sativus]	[more]
gi\|778676797\|ref\|XP_011650663.1\|	1.8e-29	35.06	PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU53171	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005996T1	MELO3C005996T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU53171	MU53171	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 53..296 score: 8.5
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 53..296 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005996	CmaCh06G009840	Cucurbita maxima (Rimu)	cmameB771
MELO3C005996	CsGy3G007800	Cucumber (Gy14) v2	cgybmeB200

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005996	Silver-seed gourd	carmeB0128
MELO3C005996	Silver-seed gourd	carmeB0968
MELO3C005996	Cucumber (Chinese Long) v3	cucmeB236
MELO3C005996	Cucumber (Chinese Long) v3	cucmeB411
MELO3C005996	Watermelon (97103) v2	mewmbB421
MELO3C005996	Watermelon (97103) v2	mewmbB434
MELO3C005996	Wax gourd	mewgoB523
MELO3C005996	Wax gourd	mewgoB540
MELO3C005996	Melon (DHL92) v3.5.1	memeB018
MELO3C005996	Cucumber (Gy14) v1	cgymeB369
MELO3C005996	Cucumber (Gy14) v1	cgymeB439
MELO3C005996	Cucurbita maxima (Rimu)	cmameB009
MELO3C005996	Cucurbita maxima (Rimu)	cmameB242
MELO3C005996	Cucurbita maxima (Rimu)	cmameB766
MELO3C005996	Cucurbita moschata (Rifu)	cmomeB230
MELO3C005996	Cucurbita moschata (Rifu)	cmomeB572
MELO3C005996	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005996	Wild cucumber (PI 183967)	cpimeB230
MELO3C005996	Wild cucumber (PI 183967)	cpimeB399
MELO3C005996	Cucumber (Chinese Long) v2	cumeB236
MELO3C005996	Cucumber (Chinese Long) v2	cumeB402
MELO3C005996	Watermelon (Charleston Gray)	mewcgB420
MELO3C005996	Watermelon (Charleston Gray)	mewcgB427
MELO3C005996	Watermelon (97103) v1	mewmB478
MELO3C005996	Watermelon (97103) v1	mewmB461
MELO3C005996	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C005996	Cucurbita pepo (Zucchini)	cpemeB698
MELO3C005996	Cucurbita pepo (Zucchini)	cpemeB815
MELO3C005996	Bottle gourd (USVL1VR-Ls)	lsimeB031
MELO3C005996	Bottle gourd (USVL1VR-Ls)	lsimeB378