MELO3C004866.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004866.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHistone H2B
Locationchr12 : 8494021 .. 8496469 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCAACAACTCACTTTTGCTCCCTTCAAAGAAATCCCATCTTCGTTAATATCTCCAAATTCCTTCGTTATATTTAGCGATGGCTCCAAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCTTCCGATAAGAAAAAAAAAAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTTCTCAAGCAAGTTCATCCTGATATCGGAATCTCCAGTAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCCGTTACTAAGTTCACTAGCTCTTAGATTGATAGATATTAGGGGTTTCTCGTGTAAAAAAAAAGCATGACGACTGTTCTGGATTGTTGATTTCTTTTGCTTTTGTTGCATATTTTGGAGTTTAATGAATGGAAATCAGTTTTCATAACGTGAATTCTTTTCAATGGCCGCTTTGTTCGGGTTGTTTGCTGGACGGTCTCTGAAAATTTACCGTAATTTCACTTTAACAAGTTTGTATGCCTGAGATTCAATATGATTGCAACAAGTATTTAGGGTTTGTTGCTTTTCAATGGTCCAGGAAGAAGACATTGATTCAATGCCGGTGAATGTGCTTCAAACTTGCCCTCTTGGTTCATGTTCTAGCTTGAATCATTTGTTGATTTATGTTTTGAAGATGCTTGTGCAAGTGACTGTACAAACTGTAGATTCCCGTGTCTTTGATAGAAGTTTTCATTGTGGGGTTTTTACAATTTCTTAGACAATGATTTCTGTGTCCCTTTGTTTGGCATCTTCAATTTGGGATCAGGGTGTTGGCATAAATCTTGAATCCATCCTCATTTTATTGATTGGTGGTGAAAGCTGTTGTCATCCATGGGTGATGTTCTGAGTTTATCCAACAAGTTAGAGAATTTTCAACCAGTAAACAGTCCCCTCAATCCACAAAGTTTAGCTCGGTCATTGTGGCCATTTTTGAGCATCTTTTGTTTGAGAATGAAAAATTGTTGCTTTCCTTCTCACCTTTGGATGATTTTGAGTTCAGGCATGGCTTCTTGTGTAGATTTTTTGTTTTCTATTATCTTTTGTGATCTTGGGCTCATTAGTCGCCTAGAGCATGTGCCACAAATGTTTCTACTCTGGTGTCTCAAGGCCTCCTCTTTGTTCTGATGAGAGGTTTGGAAAGAGCCAAAGCCACCACACCCCTAAAATAGTTGACTCAGAATTAATCATAAAATAGCTTCACCTTTCCATGTATTATTTAACTGCAATATGCGATAATTCTTTCATTATCGCTGCTATTGTCTAGACTCCCCGACGACTTTGATATGCCTGAGTTCTCATCAGTTACGAATCAGTGGGATCTATTGTATGATTACAATACACTAATGGAGAATGTATCAGATCTTTCCTACAGATTTTGCTCCTCACCAAGGTAAGGGAGGGCCAATGTGGAAGAACCTGTTTCAATTAAACTTGAAATTTGCACCAGCGGTTTAGTTATTGATTGAATCATTGTCCTCGTTTTTGTTTTTCTGTTCTTTCTGTTTCTGATGGATGCTTAGTGAAAGAAATGTCAGATATAAAGAACCAAAGAACTCAATGGTACCTGCTGAGTGCTGTTAAATATTTACTATGATTTATAAAAGATTATGTTTCAAGAAACAAGATCATATGACAGGAACAGTACTGATGATATGGCAGTACTGTACCTAGAGTATACTAGTAAACTTGGTCTAGAAAATCTCATTTGTTTTTTGTTGAACATCTCAATATCTTGCTTCTGAAAAGGAACATTTTCACAGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAATGGTCCCTGAGGATTATCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTCCTGTGTTCACATTTGAATAATGCATAGCTTTAGATTGTTGAAACCATCCCTTACATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGATTAAGTACCTCGTGCATTAAGCGGAACATGTGTGGTAGCTTAGTATAATGGCTGACAGAGTGATAGTTTATTGAGAGTGAGCTATCTCTCTCAATTCTATCCCAAATTTGGCCTGCCTTCTCTTGCATCTCTGTCTTCTTTTTAAACATCTTACTACTAACAAGTTAACTAATTCACTTGCTC

mRNA sequence

AATCCAACAACTCACTTTTGCTCCCTTCAAAGAAATCCCATCTTCGTTAATATCTCCAAATTCCTTCGTTATATTTAGCGATGGCTCCAAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCTTCCGATAAGAAAAAAAAAAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTTCTCAAGCAAGTTCATCCTGATATCGGAATCTCCAGTAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAATGGTCCCTGAGGATTATCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTCCTGTGTTCACATTTGAATAATGCATAGCTTTAGATTGTTGAAACCATCCCTTACATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGATTAAGTACCTCGTGCATTAAGCGGAACATGTGTGGTAGCTTAGTATAATGGCTGACAGAGTGATAGTTTATTGAGAGTGAGCTATCTCTCTCAATTCTATCCCAAATTTGGCCTGCCTTCTCTTGCATCTCTGTCTTCTTTTTAAACATCTTACTACTAACAAGTTAACTAATTCACTTGCTC

Coding sequence (CDS)

ATGGCTCCAAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCTTCCGATAAGAAAAAAAAAAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTTCTCAAGCAAGTTCATCCTGATATCGGAATCTCCAGTAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAA

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGYREAGLGKFITFQVGF
Homology
[Close]
BLAST of MELO3C004866.2 vs. NCBI nr
Match: XP_004139453.1 (PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. NCBI nr
Match: XP_011654070.1 (PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2B.7 [Cucumis sativus] >KGN64852.1 Histone H2B [Cucumis sativus] >KGN64854.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. NCBI nr
Match: XP_010487998.1 (PREDICTED: histone H2B.1 [Camelina sativa])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKI 60
           MAP+AEKKPAEKKPAAEE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IETYKI
Sbjct: 1   MAPRAEKKPAEKKPAAEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPG 124
           LVLPG
Sbjct: 121 LVLPG 125

[Close]
BLAST of MELO3C004866.2 vs. NCBI nr
Match: XP_010457984.1 (PREDICTED: histone H2B.1-like [Camelina sativa])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKI 60
           MAP+AEKKPAEKKPAAEE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IETYKI
Sbjct: 1   MAPRAEKKPAEKKPAAEENKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPG 124
           LVLPG
Sbjct: 121 LVLPG 125

[Close]
BLAST of MELO3C004866.2 vs. NCBI nr
Match: XP_016903018.1 (PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. TAIR10
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 9.7e-34
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 52  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 111
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 59  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 118

Query: 112 EIQTAVRLVLPG 124
           EIQTAVRLVLPG
Sbjct: 119 EIQTAVRLVLPG 130

[Close]
BLAST of MELO3C004866.2 vs. TAIR10
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 53  IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 112
           +ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE
Sbjct: 58  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117

Query: 113 IQTAVRLVLPG 124
           IQTAVRLVLPG
Sbjct: 118 IQTAVRLVLPG 128

[Close]
BLAST of MELO3C004866.2 vs. TAIR10
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 52  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 111
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 54  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 113

Query: 112 EIQTAVRLVLPG 124
           EIQTAVRLVLPG
Sbjct: 114 EIQTAVRLVLPG 125

[Close]
BLAST of MELO3C004866.2 vs. TAIR10
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 52  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 111
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 59  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 118

Query: 112 EIQTAVRLVLPG 124
           EIQTAVRLVLPG
Sbjct: 119 EIQTAVRLVLPG 130

[Close]
BLAST of MELO3C004866.2 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 107/123 (86.99%), Postives = 108/123 (87.80%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEK P           XXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKAP-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLV 112

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 112

[Close]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match: sp|A2XF66|H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_010709 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 101/132 (76.52%), Postives = 106/132 (80.30%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAA---------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAPKAEKKPAEKKPAA           XXXXXXXXXXXXXXXXXXX              
Sbjct: 1   MAPKAEKKPAEKKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGDKKGRKKAKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPG 124
           EIQT+VRLVLPG
Sbjct: 121 EIQTSVRLVLPG 132

[Close]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match: sp|A3AGM4|H2B1_ORYSJ (Histone H2B.1 OS=Oryza sativa subsp. japonica OX=39947 GN=H2B1 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 101/132 (76.52%), Postives = 106/132 (80.30%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAA---------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAPKAEKKPAEKKPAA           XXXXXXXXXXXXXXXXXXX              
Sbjct: 1   MAPKAEKKPAEKKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGDKKGRKKAKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPG 124
           EIQT+VRLVLPG
Sbjct: 121 EIQTSVRLVLPG 132

[Close]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-32
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 52  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 111
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 59  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 118

Query: 112 EIQTAVRLVLPG 124
           EIQTAVRLVLPG
Sbjct: 119 EIQTAVRLVLPG 130

[Close]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match: sp|Q1S9I9|H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-32
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 52  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 111
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 57  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 116

Query: 112 EIQTAVRLVLPG 124
           EIQTAVRLVLPG
Sbjct: 117 EIQTAVRLVLPG 128

[Close]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match: sp|Q9LQQ4|H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 53  IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 112
           +ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE
Sbjct: 58  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117

Query: 113 IQTAVRLVLPG 124
           IQTAVRLVLPG
Sbjct: 118 IQTAVRLVLPG 128

[Close]
BLAST of MELO3C004866.2 vs. TrEMBL
Match: tr|A0A0A0LV55|A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. TrEMBL
Match: tr|A0A1S4E463|A0A1S4E463_CUCME (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. TrEMBL
Match: tr|A0A0A0LST8|A0A0A0LST8_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAAEE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 122

[Close]
BLAST of MELO3C004866.2 vs. TrEMBL
Match: tr|A0A2G5DDK7|A0A2G5DDK7_AQUCA (Histone H2B OS=Aquilegia coerulea OX=218851 GN=AQUCO_02200175v1 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 109/123 (88.62%), Postives = 112/123 (91.06%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIETYKIYI 60
           MAPKAEKKPAEKKPA   XXXXXXXXXXXXXXXXXXXXXXXX   X     ++ETYKIYI
Sbjct: 1   MAPKAEKKPAEKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKXKRSKKNVETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPG 124
           LPG
Sbjct: 121 LPG 123

[Close]
BLAST of MELO3C004866.2 vs. TrEMBL
Match: tr|A0A0D3BU25|A0A0D3BU25_BRAOL (Histone H2B OS=Brassica oleracea var. oleracea OX=109376 GN=106337286 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 110/128 (85.94%), Postives = 111/128 (86.72%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPA-----AEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIET 60
           MAPKA KKPAEKKPA     AEE XXXXXXXXXXXXXXXXXXXXXX          SIET
Sbjct: 1   MAPKAGKKPAEKKPAAAEKPAEEVXXXXXXXXXXXXXXXXXXXXXXIDKKKKRNKKSIET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPG 124
           AVRLVLPG
Sbjct: 121 AVRLVLPG 128

The following BLAST results are available for this feature:
BLAST of MELO3C004866.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139453.11.0e-3397.56PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis... [more]
XP_011654070.11.0e-3397.56PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2... [more]
XP_010487998.11.0e-3396.80PREDICTED: histone H2B.1 [Camelina sativa][more]
XP_010457984.11.0e-3396.80PREDICTED: histone H2B.1-like [Camelina sativa][more]
XP_016903018.11.0e-3397.56PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo][more]
BLAST of MELO3C004866.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59910.19.7e-3497.22Histone superfamily protein[more]
AT1G07790.11.3e-3398.59Histone superfamily protein[more]
AT3G46030.11.6e-3397.22Histone superfamily protein[more]
AT3G45980.11.6e-3397.22Histone superfamily protein[more]
AT5G02570.11.6e-3386.99Histone superfamily protein[more]
BLAST of MELO3C004866.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2XF66|H2B1_ORYSI1.0e-3276.52Histone H2B.1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_010709 PE=3 SV=1[more]
sp|A3AGM4|H2B1_ORYSJ1.0e-3276.52Histone H2B.1 OS=Oryza sativa subsp. japonica OX=39947 GN=H2B1 PE=1 SV=1[more]
sp|P40283|H2B11_ARATH1.7e-3297.22Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
sp|Q1S9I9|H2B1_MEDTR1.7e-3297.22Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
sp|Q9LQQ4|H2B1_ARATH2.3e-3298.59Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3[more]
BLAST of MELO3C004866.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LV55|A0A0A0LV55_CUCSA6.9e-3497.56Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1[more]
tr|A0A1S4E463|A0A1S4E463_CUCME6.9e-3497.56Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1[more]
tr|A0A0A0LST8|A0A0A0LST8_CUCSA6.9e-3497.56Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1[more]
tr|A0A2G5DDK7|A0A2G5DDK7_AQUCA1.5e-3388.62Histone H2B OS=Aquilegia coerulea OX=218851 GN=AQUCO_02200175v1 PE=3 SV=1[more]
tr|A0A0D3BU25|A0A0D3BU25_BRAOL2.6e-3385.94Histone H2B OS=Brassica oleracea var. oleracea OX=109376 GN=106337286 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR000558Histone_H2B
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005694 chromosome
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009507 chloroplast
cellular_component GO:0000788 nuclear nucleosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004866.2.1MELO3C004866.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 75..95
score: 75.74
coord: 56..74
score: 80.55
coord: 114..127
score: 64.22
coord: 97..114
score: 76.51
IPR000558Histone H2BSMARTSM00427h2b3coord: 46..134
e-value: 4.9E-48
score: 175.6
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..123
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 1..131
e-value: 5.1E-44
score: 151.3
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 27..123
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 6..119
e-value: 3.8E-22
score: 79.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availablePANTHERPTHR23428:SF97HISTONE H2B.11-RELATEDcoord: 1..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C004866.2CmaCh13G002590Cucurbita maxima (Rimu)cmamedB215
MELO3C004866.2CmoCh13G002650Cucurbita moschata (Rifu)cmomedB203
MELO3C004866.2CmoCh12G008220Cucurbita moschata (Rifu)cmomedB151
MELO3C004866.2Lsi03G000550Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004866.2Cp4.1LG07g06730Cucurbita pepo (Zucchini)cpemedB880
MELO3C004866.2Cp4.1LG20g07320Cucurbita pepo (Zucchini)cpemedB563
MELO3C004866.2Cla001860Watermelon (97103) v1medwmB165
MELO3C004866.2ClCG01G013820Watermelon (Charleston Gray)medwcgB127
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004866.2Cucumber (Gy14) v2cgybmedB009
MELO3C004866.2Cucumber (Gy14) v1cgymedB361
MELO3C004866.2Cucurbita maxima (Rimu)cmamedB161
MELO3C004866.2Wild cucumber (PI 183967)cpimedB011
MELO3C004866.2Cucumber (Chinese Long) v2cumedB010
MELO3C004866.2Silver-seed gourdcarmedB0174
MELO3C004866.2Cucumber (Chinese Long) v3cucmedB009
MELO3C004866.2Watermelon (97103) v2medwmbB127
MELO3C004866.2Wax gourdmedwgoB176