MELO3C004518 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C004518
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDynein light chain-like protein
Locationchr5 : 27180720 .. 27182418 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATTCTCTTAGAGATCATAATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGTATTTATATATTTATCAGCTATACTGTTCACATTGACAAGTTTTGTTTAGTGGTTAGTTTTTCGTACAACTTCTCTCTTTCAACGTATCATTTGTTTTTTCTTTTCGATCTTAGTTGTTATGAAATCGACAAATAAAAGAACGATAAAACACAATATAAGAAACAATGTGTTAGTTATGTCTACAAAATGGATTGTAGAGAGAGTTCAGTGGGATTAGAGGGTTTACTGTATGTATGCAGTGAATCCCTTTAAACTCTAATGTCAAATTTACATATATTGATGGGATTTGATCATTTTAAAGTAAAACTAGTTTTTTGGCCTTTTTGGGCATTGGGAATTTCATATTGGATTTGGTCTTTTTGTGAGGAAACGTTGAAAGAAAAGGGCAGGCAGGAGCTCCTTTTAATTTGTTGCTTTCTTGATTTCCTTCTTTTGGTCATACTCAGAAAGAAAATCTAACAAAGTGAAACTGTCTTTCGTTCGAGTACGGAGATTCAAACCTTCGACTTTAAGAAAGAAATAATAAATGACAATTACTGTTTGAGTTAGGTTCACGTTTGCTCTCTAAACTCTATTTGTTGTTCACTTCCATCACTAAATCTGTGTATTAATTGTATAATCAGAAACTAAGTCTTTTGAGAGAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGTGTGTTAGATCAGTGATTAGCACATATTTTAAAGCTAATAATCTCATATATTTTCATTGAAATTGAAGCTCTTTTTTCTTATCCATGTGCATTTCTTGATACTTTACTCTTCCTAATTTCTCTTGCAATCATTTCGAAAGAATCTCACTCGTTACTAAATTATTGTAAACTGAGATTGGTTACGAGTCTTGAATCAAGAAACGGTAACAAGAGTGGTATTAAGTGACAAAGTTCAAAGGTGTTTTTCTTTCATAATTTAGCTAACTCAAAACACCATAAAATTAGATGATAAGAATAACTTTTAGAACAAATATTTGGTTTGACACACTACATTGATTCATACTGATTAAATTGGGGATTAATGGCAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGAGTTTTTGGTTCACAGAAAATGATGAATCTATGTAAAGCCATTTTA

mRNA sequence

ACATTCTCTTAGAGATCATAATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGAGTTTTTGGTTCACAGAAAATGATGAATCTATGTAAAGCCATTTTA

Coding sequence (CDS)

ATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGA

Protein sequence

MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSGGGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE*
Homology
[Close]
BLAST of MELO3C004518 vs. Swiss-Prot
Match: DYL_DICDI (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 101 VKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFG 160
           + V  +DMP+ MQ  A     ++++  E    + +A  IKKEFDK Y P WHCIVG SFG
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 67

Query: 161 SFVTHSTGCFLYFSMEKLYILLFR 185
           SFVTH T  F+YF++ K  +LLF+
Sbjct: 68  SFVTHETKNFIYFNINKHSVLLFK 89

[Close]
BLAST of MELO3C004518 vs. Swiss-Prot
Match: DYL1_HELCR (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-14
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DMPE MQ  A   A ++   LEKF+  K +A  IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMPEDMQQDAVDCATQA---LEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ +LLF++
Sbjct: 71  HETKHFIYFYLGQVAVLLFKS 88

[Close]
BLAST of MELO3C004518 vs. Swiss-Prot
Match: DYL1_MACFA (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A ++   LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQA---LEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C004518 vs. Swiss-Prot
Match: DYL1_RAT (Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A ++   LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQA---LEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C004518 vs. Swiss-Prot
Match: DYL1_RABIT (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A ++   LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQA---LEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C004518 vs. TrEMBL
Match: A0A0A0LKY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006120 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-98
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 1 

Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGG RNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH G
Sbjct: 1   MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  GGGAGGIG---EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120
           GGG GG+G   EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF
Sbjct: 61  GGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120

Query: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180
           RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK
Sbjct: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180

Query: 181 LYILLFRTKIQKAIE 193
           LYILLFRTKIQKAIE
Sbjct: 181 LYILLFRTKIQKAIE 194

[Close]
BLAST of MELO3C004518 vs. TrEMBL
Match: A0A061GPB7_THECC (Axonemal dynein light chain, putative OS=Theobroma cacao GN=TCM_038044 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.5e-53
Identity = 117/192 (60.94%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 5   NKQMKGFKS-FYKSRDGGGRN------VSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQ 64
           NK  KGF S FY S     +       V++ +PVS +S+ K  +   + + +   +  ++
Sbjct: 6   NKLKKGFLSTFYWSSTKSHKPKSEPAAVANIKPVSQNSLLK-KLENCHTIEQAGPRKIEK 65

Query: 65  HSGGGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 124
              GGG GG       G   +VEGRKSVSHVETNL SV +FLQVKVLVSDMP  MQ+ AF
Sbjct: 66  EGVGGGGGG-------GEAKLVEGRKSVSHVETNLSSVIAFLQVKVLVSDMPGFMQVHAF 125

Query: 125 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 184
           R ARR+YDSLEKFSSKHMAYN+KKEFDKVYGPAWHCIVGS+FGSFVTHSTGCFLYFSMEK
Sbjct: 126 RCARRTYDSLEKFSSKHMAYNMKKEFDKVYGPAWHCIVGSNFGSFVTHSTGCFLYFSMEK 185

Query: 185 LYILLFRTKIQK 190
           LYIL+F+TK+Q+
Sbjct: 186 LYILVFKTKVQR 189

[Close]
BLAST of MELO3C004518 vs. TrEMBL
Match: A0A0D2Q7D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G018800 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-52
Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 1 

Query: 5   NKQMKGFKS-FYKSRDGGGRNVSSREPVSTSSV---DKTSIYKYNWLGRKSKKATDQHSG 64
           +K++  F S FY+S      N  S++P S  +V   +  S+ +   L +       + +G
Sbjct: 8   HKKLGDFLSTFYRS------NAKSQKPKSEPAVLVNNNKSVSQSLLLNKLENGHAIEKAG 67

Query: 65  GGGA---GGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 124
             G    G  GEE  GG+ VVV+GRKSVSH+ETNL SV SFLQVKVLV+DMP  MQ+ AF
Sbjct: 68  RRGIEKEGTEGEEGGGGKVVVVQGRKSVSHIETNLSSVISFLQVKVLVADMPGFMQVHAF 127

Query: 125 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 184
           R ARR+YDSLEKFSS+H+AYNIKKEFDKVYGPAWHCIVGS+FGSFVTHSTGCFLYFSMEK
Sbjct: 128 RCARRTYDSLEKFSSRHVAYNIKKEFDKVYGPAWHCIVGSNFGSFVTHSTGCFLYFSMEK 187

Query: 185 LYILLFRTKIQK 190
           LYIL+F+TK+++
Sbjct: 188 LYILIFKTKVRR 193

[Close]
BLAST of MELO3C004518 vs. TrEMBL
Match: B9SEP6_RICCO (Axonemal dynein light chain, putative OS=Ricinus communis GN=RCOM_0221220 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-51
Identity = 114/187 (60.96%), Postives = 132/187 (70.59%), Query Frame = 1 

Query: 6   KQMKG--FKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSGGGG 65
           KQ +G    +FYKS         + +P    +V       +N   RK + +  + +    
Sbjct: 7   KQKRGNFLMNFYKSSS------KNYKPKIEPNVVINKPLSHNLFSRKLENSYQETTAAER 66

Query: 66  AGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRS 125
            G  G        V+VE RKSVSHVETNL SVASFLQVKVLV+DMP  MQI AFR ARR+
Sbjct: 67  VGERGN-------VMVEARKSVSHVETNLASVASFLQVKVLVTDMPGFMQIHAFRCARRT 126

Query: 126 YDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLF 185
           YDSL+KFSSKH+AYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYIL+F
Sbjct: 127 YDSLDKFSSKHIAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILVF 180

Query: 186 RTKIQKA 191
           +TK+QKA
Sbjct: 187 KTKVQKA 180

[Close]
BLAST of MELO3C004518 vs. TrEMBL
Match: A0A068UPZ2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031091001 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.9e-50
Identity = 113/200 (56.50%), Postives = 138/200 (69.00%), Query Frame = 1 

Query: 3   TLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYK-YNWLGRKSKKATDQHSGG 62
           T  KQ KG   +    D G    + ++P  +SS  K  I+   +W  R+SK   +    G
Sbjct: 7   TREKQKKGGVMYVYKLDSG----NLKKPSDSSSAKKGIIHSGISWGLRRSKTVREVVDHG 66

Query: 63  GGAGGIGEE----IMGGRK-----VVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIM 122
                + +E    +   RK      V  GRKSVSH+E N+ SVASFLQVKVLV+DMP  M
Sbjct: 67  RVKTSVEDETKEIVAESRKSVSSEAVAGGRKSVSHLEVNVASVASFLQVKVLVTDMPGFM 126

Query: 123 QIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLY 182
           Q+ AFR AR +YDSLEKFS+KHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTH+TGCFLY
Sbjct: 127 QVHAFRCARGTYDSLEKFSAKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHATGCFLY 186

Query: 183 FSMEKLYILLFRTKIQKAIE 193
           FSMEKLYIL+F+TK+++A+E
Sbjct: 187 FSMEKLYILVFKTKVERALE 202

[Close]
BLAST of MELO3C004518 vs. TAIR10
Match: AT5G20110.1 (AT5G20110.1 Dynein light chain type 1 family protein)

HSP 1 Score: 168.3 bits (425), Expect = 4.6e-42
Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 1 

Query: 80  EGRKSVSHVETN----LGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHM 139
           EGRKSVSHVE +    + + A  L V++L +DMP  MQ  AFR AR + DSLEKFSSKHM
Sbjct: 92  EGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHM 151

Query: 140 AYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKA 191
           A+N+KKEFDK YGPAWHCIVGSSFGSFVTHSTGCF+YFSM+KLY+LLF+TK++ A
Sbjct: 152 AFNLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKTKVRPA 206

[Close]
BLAST of MELO3C004518 vs. TAIR10
Match: AT1G23220.1 (AT1G23220.1 Dynein light chain type 1 family protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.0e-22
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 1 

Query: 101 VKVLVSDMPEIMQIQAFRTARRSYDSLE-KFSSKHMAYNIKKEFDKVYGPAWHCIVGSSF 160
           V+V  SDMP   Q +AF  +R   ++   K  +K +A+ +KK+FD  YGPAWHCIVG+SF
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 161 GSFVTHSTGCFLYFSMEKLYILLFRTKIQ 189
           GS+VTHSTG FLYF ++K+Y+LLF+T ++
Sbjct: 96  GSYVTHSTGGFLYFQIDKVYVLLFKTAVE 124

[Close]
BLAST of MELO3C004518 vs. TAIR10
Match: AT3G16120.1 (AT3G16120.1 Dynein light chain type 1 family protein)

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 1 

Query: 100 QVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSF 159
           + KV  +DMP  MQ+QA + A +S D  + F S  +A +IKKEFD+ YG  W C+VG++F
Sbjct: 5   KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNF 64

Query: 160 GSFVTHSTGCFLYFSMEKLYILLFR 185
           G F THS G F+YF +  L  L+F+
Sbjct: 65  GCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]
BLAST of MELO3C004518 vs. TAIR10
Match: AT4G27360.1 (AT4G27360.1 Dynein light chain type 1 family protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTH 165
           +DM + M+  A   A ++ D  +      +A  IKKEFD+ YG  W CIVG+ FGSFVTH
Sbjct: 11  TDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVTH 70

Query: 166 STGCFLYFSMEKLYILLFRTKI 188
            +GCF++FS+  L ILLF+  +
Sbjct: 71  CSGCFIHFSVGSLTILLFKGSV 92

[Close]
BLAST of MELO3C004518 vs. TAIR10
Match: AT4G15930.1 (AT4G15930.1 Dynein light chain type 1 family protein)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-15
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 1 

Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM + MQ +A   A  ++   EK+S  K +A NIKKEFDK +G  WHCIVG +FGS+VT
Sbjct: 45  ADMKDDMQKEAIEIAISAF---EKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVT 104

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF +++  +LLF++
Sbjct: 105 HETNHFVYFYLDQKAVLLFKS 122

[Close]
BLAST of MELO3C004518 vs. NCBI nr
Match: gi|659071014|ref|XP_008457739.1| (PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.0e-104
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKAIE
Sbjct: 181 LLFRTKIQKAIE 192

[Close]
BLAST of MELO3C004518 vs. NCBI nr
Match: gi|700205547|gb|KGN60666.1| (hypothetical protein Csa_2G006120 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 3.3e-98
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 1 

Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGG RNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH G
Sbjct: 1   MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  GGGAGGIG---EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120
           GGG GG+G   EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF
Sbjct: 61  GGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120

Query: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180
           RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK
Sbjct: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180

Query: 181 LYILLFRTKIQKAIE 193
           LYILLFRTKIQKAIE
Sbjct: 181 LYILLFRTKIQKAIE 194

[Close]
BLAST of MELO3C004518 vs. NCBI nr
Match: gi|778673957|ref|XP_004139419.2| (PREDICTED: LOW QUALITY PROTEIN: dynein light chain, cytoplasmic [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 4.8e-65
Identity = 143/192 (74.48%), Postives = 145/192 (75.52%), Query Frame = 1 

Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGG RN                   + W  R           
Sbjct: 1   MATLNKQMKGFKSFYKSRDGG-RN-------------------WRWWCR----------- 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           G   G  G +  GG     EGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GHPRGDNGRKKSGGX----EGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 157

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKAIE
Sbjct: 181 LLFRTKIQKAIE 157

[Close]
BLAST of MELO3C004518 vs. NCBI nr
Match: gi|1009170825|ref|XP_015866406.1| (PREDICTED: uncharacterized protein LOC107403987 [Ziziphus jujuba])

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 129/207 (62.32%), Postives = 144/207 (69.57%), Query Frame = 1 

Query: 1   MATLNKQMK---GFKSFYKSRDGGGRNVSSREPVSTSSVDKTSI-YKYNWLGRKS---KK 60
           MAT+N++      F S YK   G      S+     S VDK  I    +WL RK    K+
Sbjct: 1   MATINEKHPKRGSFMSIYKPSSGNRIKTESKP----SLVDKNYINVSRSWLFRKQRGRKE 60

Query: 61  ATDQHSGG---GGAGGIGEEIMGGR-----KVVVEGRKSVSHVETNLGSVASFLQVKVLV 120
           A DQ   G     A    EE  GG+      VVVE RKSVSHVETNL SVASFLQVKVLV
Sbjct: 61  AEDQFGSGREPAAAARNNEEERGGQGREEGMVVVEARKSVSHVETNLASVASFLQVKVLV 120

Query: 121 SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTH 180
           SDMP  MQ+ AFR  RR+YDSLEKFS+KHMAYN+KKEFDKVYGPAWHCIVGS+FGSFVTH
Sbjct: 121 SDMPGFMQVHAFRCCRRTYDSLEKFSAKHMAYNMKKEFDKVYGPAWHCIVGSNFGSFVTH 180

Query: 181 STGCFLYFSMEKLYILLFRTKIQKAIE 193
           STGCFLYFSMEKLYILLF+TK+QKA +
Sbjct: 181 STGCFLYFSMEKLYILLFKTKVQKAAD 203

[Close]
BLAST of MELO3C004518 vs. NCBI nr
Match: gi|702306723|ref|XP_010049977.1| (PREDICTED: serine/arginine-rich splicing factor SR34A isoform X1 [Eucalyptus grandis])

HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55
Identity = 121/206 (58.74%), Postives = 139/206 (67.48%), Query Frame = 1 

Query: 6   KQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKY---NWLGRKS------KKATD 65
           K++  F +FYK     G   + R      S       KY    W  RKS      K+  D
Sbjct: 8   KKLGSFMNFYKPSAVAGATSTGRIDCVAKSDPSAFTNKYITRGWTLRKSRNCPESKRGGD 67

Query: 66  QH----------SGGGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVS 125
           Q            GGGG+GG G    G   +VVE RKSVSHVETNL SV +FLQVKV+V+
Sbjct: 68  QQLVSANSGRGGDGGGGSGGGGGGGGGNANMVVEARKSVSHVETNLASVVAFLQVKVMVA 127

Query: 126 DMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHS 185
           DMP  MQ+ AFR ARR+YDSLEKFSSKHMAYN+KKEFDKVYGPAWHCIVGS+FGSFVTH+
Sbjct: 128 DMPGFMQVHAFRCARRTYDSLEKFSSKHMAYNMKKEFDKVYGPAWHCIVGSNFGSFVTHA 187

Query: 186 TGCFLYFSMEKLYILLFRTKIQKAIE 193
           TGCFLYFSMEKLYILLF+TK+QKA +
Sbjct: 188 TGCFLYFSMEKLYILLFKTKVQKATD 213

The following BLAST results are available for this feature:
BLAST of MELO3C004518 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DYL_DICDI1.3e-1447.62Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB PE=3 SV=1[more]
DYL1_HELCR1.7e-1451.85Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina PE=3 SV=... [more]
DYL1_MACFA1.4e-1349.38Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1 PE=3 SV=1[more]
DYL1_RAT1.4e-1349.38Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1 PE=1 SV=1[more]
DYL1_RABIT1.4e-1349.38Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus GN=DYNLL1 PE=1 SV=1[more]
BLAST of MELO3C004518 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKY0_CUCSA2.3e-9894.87Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006120 PE=4 SV=1[more]
A0A061GPB7_THECC6.5e-5360.94Axonemal dynein light chain, putative OS=Theobroma cacao GN=TCM_038044 PE=4 SV=1[more]
A0A0D2Q7D6_GOSRA4.2e-5259.90Uncharacterized protein OS=Gossypium raimondii GN=B456_009G018800 PE=4 SV=1[more]
B9SEP6_RICCO4.6e-5160.96Axonemal dynein light chain, putative OS=Ricinus communis GN=RCOM_0221220 PE=4 S... [more]
A0A068UPZ2_COFCA3.9e-5056.50Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031091001 PE=4 SV=1[more]
BLAST of MELO3C004518 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20110.14.6e-4269.57 Dynein light chain type 1 family protein[more]
AT1G23220.14.0e-2252.81 Dynein light chain type 1 family protein[more]
AT3G16120.15.1e-1747.06 Dynein light chain type 1 family protein[more]
AT4G27360.11.6e-1545.12 Dynein light chain type 1 family protein[more]
AT4G15930.18.2e-1548.15 Dynein light chain type 1 family protein[more]
BLAST of MELO3C004518 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071014|ref|XP_008457739.1|3.0e-104100.00PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo][more]
gi|700205547|gb|KGN60666.1|3.3e-9894.87hypothetical protein Csa_2G006120 [Cucumis sativus][more]
gi|778673957|ref|XP_004139419.2|4.8e-6574.48PREDICTED: LOW QUALITY PROTEIN: dynein light chain, cytoplasmic [Cucumis sativus... [more]
gi|1009170825|ref|XP_015866406.1|1.2e-5562.32PREDICTED: uncharacterized protein LOC107403987 [Ziziphus jujuba][more]
gi|702306723|ref|XP_010049977.1|3.4e-5558.74PREDICTED: serine/arginine-rich splicing factor SR34A isoform X1 [Eucalyptus gra... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0030286dynein complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0030286 dynein complex
cellular_component GO:0031514 motile cilium
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004518T1MELO3C004518T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2GENE3DG3DSA:3.30.740.10coord: 101..185
score: 1.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 69..190
score: 1.3
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 101..185
score: 1.2
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 96..185
score: 2.1
NoneNo IPR availablePANTHERPTHR11886:SF51SUBFAMILY NOT NAMEDcoord: 69..190
score: 1.3
NoneNo IPR availableunknownSSF54648DLCcoord: 98..185
score: 1.57

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C004518Csa2G006120Cucumber (Chinese Long) v2cumeB140
MELO3C004518Cla016724Watermelon (97103) v1mewmB421
MELO3C004518ClCG11G002920Watermelon (Charleston Gray)mewcgB372
MELO3C004518Cla97C11G209390Watermelon (97103) v2mewmbB373
MELO3C004518Bhi06G001676Wax gourdmewgoB461
MELO3C004518CSPI02G01600Wild cucumber (PI 183967)cpimeB140
MELO3C004518Cucsa.131960Cucumber (Gy14) v1cgymeB216
MELO3C004518CmaCh05G013040Cucurbita maxima (Rimu)cmameB735
MELO3C004518CmaCh12G012180Cucurbita maxima (Rimu)cmameB172
MELO3C004518CmoCh12G012460Cucurbita moschata (Rifu)cmomeB161
MELO3C004518Lsi11G003040Bottle gourd (USVL1VR-Ls)lsimeB116
MELO3C004518Cp4.1LG11g10930Cucurbita pepo (Zucchini)cpemeB099
MELO3C004518Cp4.1LG07g11370Cucurbita pepo (Zucchini)cpemeB778
MELO3C004518CsGy2G001620Cucumber (Gy14) v2cgybmeB121
MELO3C004518Carg10895Silver-seed gourdcarmeB0577
MELO3C004518Carg17514Silver-seed gourdcarmeB0258
MELO3C004518CsaV3_2G002750Cucumber (Chinese Long) v3cucmeB142
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004518Cucurbita pepo (Zucchini)cpemeB343
MELO3C004518Cucurbita pepo (Zucchini)cpemeB632
MELO3C004518Cucurbita pepo (Zucchini)cpemeB633
MELO3C004518Cucurbita pepo (Zucchini)cpemeB772
MELO3C004518Bottle gourd (USVL1VR-Ls)lsimeB219
MELO3C004518Bottle gourd (USVL1VR-Ls)lsimeB418
MELO3C004518Bottle gourd (USVL1VR-Ls)lsimeB442
MELO3C004518Cucumber (Gy14) v2cgybmeB066
MELO3C004518Cucumber (Gy14) v2cgybmeB492
MELO3C004518Silver-seed gourdcarmeB0039
MELO3C004518Silver-seed gourdcarmeB0133
MELO3C004518Silver-seed gourdcarmeB0209
MELO3C004518Cucumber (Chinese Long) v3cucmeB079
MELO3C004518Cucumber (Chinese Long) v3cucmeB146
MELO3C004518Cucumber (Chinese Long) v3cucmeB575
MELO3C004518Watermelon (97103) v2mewmbB398
MELO3C004518Watermelon (97103) v2mewmbB404
MELO3C004518Watermelon (97103) v2mewmbB415
MELO3C004518Wax gourdmewgoB488
MELO3C004518Wax gourdmewgoB491
MELO3C004518Melon (DHL92) v3.5.1memeB088
MELO3C004518Melon (DHL92) v3.5.1memeB104
MELO3C004518Melon (DHL92) v3.5.1memeB124
MELO3C004518Cucurbita maxima (Rimu)cmameB074
MELO3C004518Cucurbita maxima (Rimu)cmameB129
MELO3C004518Cucurbita maxima (Rimu)cmameB136
MELO3C004518Cucurbita moschata (Rifu)cmomeB067
MELO3C004518Cucurbita moschata (Rifu)cmomeB121
MELO3C004518Cucurbita moschata (Rifu)cmomeB126
MELO3C004518Cucurbita moschata (Rifu)cmomeB724
MELO3C004518Wild cucumber (PI 183967)cpimeB076
MELO3C004518Wild cucumber (PI 183967)cpimeB563
MELO3C004518Cucumber (Chinese Long) v2cumeB076
MELO3C004518Cucumber (Chinese Long) v2cumeB556
MELO3C004518Watermelon (Charleston Gray)mewcgB361
MELO3C004518Watermelon (Charleston Gray)mewcgB396
MELO3C004518Watermelon (Charleston Gray)mewcgB401
MELO3C004518Watermelon (Charleston Gray)mewcgB406
MELO3C004518Watermelon (97103) v1mewmB395
MELO3C004518Watermelon (97103) v1mewmB400
MELO3C004518Watermelon (97103) v1mewmB409
MELO3C004518Watermelon (97103) v1mewmB439