MELO3C004093.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004093.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein ATL56
Locationchr05 : 23972176 .. 23972915 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACTCTTTTTCCTCGAACTCATACATCATTCAACCATATCCCCAATCCCCTAATTTCCTTCAAAATTCCACTCATCCCTCGCCCCCCAACAAACCCCAAATGCCCTTTCAACATTCTGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCTCCACCGCCTAAGCCTGAAACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACCGCCCTACTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGACGTTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGGTTTAGAAAAGGTCAGTGGTGTAGGAGACTTGGTGGGTGTGGACATGTTTATCACCGGAAGTGTATTGATTCGTGGTTAGTTAGGGTTTCTGCTTGTCCTCTTTGCCGACGATGTGTTCGGTTGGATATGGAAGAACATGAAATTGATTGCGTAAGTTCTCGGAACTTTGAGCTTTTTTATGCTCTGTAACTGCTTTTAACTTTAGTTTAGTTTCTTCTTTCTTTTGATTATGTTCCTCTTTTAGATGTATATATAGTTGAATCAATGTTATTCGATGAAGGTTTCTTTTGGT

mRNA sequence

ATACTCTTTTTCCTCGAACTCATACATCATTCAACCATATCCCCAATCCCCTAATTTCCTTCAAAATTCCACTCATCCCTCGCCCCCCAACAAACCCCAAATGCCCTTTCAACATTCTGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCTCCACCGCCTAAGCCTGAAACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACCGCCCTACTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGACGTTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGGTTTAGAAAAGGTCAGTGGTGTAGGAGACTTGGTGGGTGTGGACATGTTTATCACCGGAAGTGTATTGATTCGTGGTTAGTTAGGGTTTCTGCTTGTCCTCTTTGCCGACGATGTGTTCGGTTGGATATGGAAGAACATGAAATTGATTGCGTAAGTTCTCGGAACTTTGAGCTTTTTTATGCTCTGTAACTGCTTTTAACTTTAGTTTAGTTTCTTCTTTCTTTTGATTATGTTCCTCTTTTAGATGTATATATAGTTGAATCAATGTTATTCGATGAAGGTTTCTTTTGGT

Coding sequence (CDS)

TACTCTTTTTCCTCGAACTCATACATCATTCAACCATATCCCCAATCCCCTAATTTCCTTCAAAATTCCACTCATCCCTCGCCCCCCAACAAACCCCAAATGCCCTTTCAACATTCTGCCGCCGTGAGCGGCGACCCACTTCCCCACCCACCTCCACCGCCTAAGCCTGAAACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACCGCCCTACTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGACGTTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGGTTTAGAAAAGGTCAGTGGTGTAGGAGACTTGGTGGGTGTGGACATGTTTATCACCGGAAGTGTATTGATTCGTGGTTAGTTAGGGTTTCTGCTTGTCCTCTTTGCCGACGATGTGTTCGGTTGGATATGGAAGAACATGAAATTGATTGCGTAAGTTCTCGGAACTTTGAGCTTTTTTATGCTCTGTAA

Protein sequence

YSFSSNSYIIQPYPQSPNFLQNSTHPSPPNKPQMPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL
Homology
[Close]
BLAST of MELO3C004093.2 vs. NCBI nr
Match: KGN61089.1 (hypothetical protein Csa_2G047820 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80
Identity = 199/204 (97.55%), Postives = 199/204 (97.55%), Query Frame = 0 

Query: 8   YIIQPYPQSPNFLQNSTHPSPPNKPQMPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXX 67
           YIIQPYPQSPNFLQNSTHPSPPN PQMPFQ SAAVSG PLXXXXXXXXXXXXXXXXXXXX
Sbjct: 30  YIIQPYPQSPNFLQNSTHPSPPNNPQMPFQPSAAVSGHPLXXXXXXXXXXXXXXXXXXXX 89

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLL 127
           XXXXXXXXXXXXXXXXXXXXXXXXXXX SALHRRRRFHSR SQYSDSSSGFSHRDLKKLL
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLL 149

Query: 128 QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC 187
           QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC
Sbjct: 150 QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC 209

Query: 188 VRLDMEEHEIDCVSSRNFELFYAL 212
           VRLDMEEHEIDCVSSRNFELFYAL
Sbjct: 210 VRLDMEEHEIDCVSSRNFELFYAL 233

[Close]
BLAST of MELO3C004093.2 vs. NCBI nr
Match: XP_008452306.1 (PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 34  MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 93
           MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 94  XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 153
           XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 154 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 212
           QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]
BLAST of MELO3C004093.2 vs. NCBI nr
Match: XP_004149098.1 (PREDICTED: RING-H2 finger protein ATL56 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 1.0e-64
Identity = 174/178 (97.75%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 34  MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 93
           MPFQ SAAVSG PLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPFQPSAAVSGHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 94  XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 153
           X SALHRRRRFHSR SQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  XASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 154 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 212
           QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]
BLAST of MELO3C004093.2 vs. NCBI nr
Match: XP_022997472.1 (RING-H2 finger protein ATL56-like [Cucurbita maxima])

HSP 1 Score: 213.8 bits (543), Expect = 5.7e-52
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0 

Query: 96  SALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQW 155
           SALHR      RR+QY DSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKGQW
Sbjct: 63  SALHR------RRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKGQW 122

Query: 156 CRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 212
           CR+LGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEEH+I+CVS RN+E+FYAL
Sbjct: 123 CRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSPRNYEIFYAL 172

[Close]
BLAST of MELO3C004093.2 vs. NCBI nr
Match: XP_023546946.1 (RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.4 bits (542), Expect = 7.5e-52
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0 

Query: 96  SALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQW 155
           SALHR      RR+QY DSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKGQW
Sbjct: 63  SALHR------RRAQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKGQW 122

Query: 156 CRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 212
           CR+LGGCGHVYHRKCIDSWLVRVS CPLCRRCVRLDMEEH+I+CVSSRN+E+ YAL
Sbjct: 123 CRKLGGCGHVYHRKCIDSWLVRVSTCPLCRRCVRLDMEEHKINCVSSRNYEILYAL 172

[Close]
BLAST of MELO3C004093.2 vs. TAIR10
Match: AT4G30370.1 (RING/U-box superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 0 

Query: 99  HRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRR 158
           HR RR   RR +YSD   G S R +K+L QF++    + +   DC +C+DGFR+GQWCR+
Sbjct: 76  HRLRR--HRRHEYSD---GLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRK 135

Query: 159 LGGCGHVYHRKCIDSWLVRVSACPLCR 186
           L  CGHV+HRKC+D WL++VS CP+CR
Sbjct: 136 LPRCGHVFHRKCVDLWLIKVSTCPICR 157

[Close]
BLAST of MELO3C004093.2 vs. TAIR10
Match: AT2G18670.1 (RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 117 GFSHRDLKKLLQFRFSN-WVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWL 176
           G S R +KKL QF+FS        + DC +C DGFR+GQWCR L GCGHV+HRKC+D+WL
Sbjct: 83  GLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142

Query: 177 VRVSACPLCRRCVRL---DMEEHEI 198
           ++ S CP+CR  VRL   D +E E+
Sbjct: 143 LKASTCPICRARVRLWEEDPQEGEL 167

[Close]
BLAST of MELO3C004093.2 vs. TAIR10
Match: AT3G20395.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0 

Query: 131 FSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCR 186
           F N     ++  CSICL  + +G+  R+L  CGH +H  CID WL+R   CP+CR
Sbjct: 159 FYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213

[Close]
BLAST of MELO3C004093.2 vs. TAIR10
Match: AT1G74410.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.6e-10
Identity = 28/87 (32.18%), Postives = 45/87 (51.72%), Query Frame = 0 

Query: 104 FHSRRSQYSD-SSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGC 163
           +  R   Y +  + G S   L+KL  +  S+ +       C+ICL   + G+  R L  C
Sbjct: 136 YEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKC 195

Query: 164 GHVYHRKCIDSWLVRVSACPLCRRCVR 190
            H +H  C+D WL+R  +CP+CR+ V+
Sbjct: 196 DHTFHLVCVDKWLIRHGSCPICRQAVK 222

[Close]
BLAST of MELO3C004093.2 vs. TAIR10
Match: AT5G66070.2 (RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0 

Query: 115 SSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSW 174
           S G +   L ++ + R ++  +P   + CS+CL  F+ G+  R L  C H++H  CID W
Sbjct: 174 SKGLTGDSLNRIPKVRITD-TSPEI-VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 233

Query: 175 LVRVSACPLCRR 187
           L R ++CPLCRR
Sbjct: 234 LRRHASCPLCRR 243

[Close]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match: sp|Q9M0C3|ATL14_ARATH (RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 0 

Query: 99  HRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRR 158
           HR RR   RR +YSD   G S R +K+L QF++    + +   DC +C+DGFR+GQWCR+
Sbjct: 76  HRLRR--HRRHEYSD---GLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRK 135

Query: 159 LGGCGHVYHRKCIDSWLVRVSACPLCR 186
           L  CGHV+HRKC+D WL++VS CP+CR
Sbjct: 136 LPRCGHVFHRKCVDLWLIKVSTCPICR 157

[Close]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match: sp|Q9ZV51|ATL56_ARATH (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.6e-21
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 117 GFSHRDLKKLLQFRFSN-WVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWL 176
           G S R +KKL QF+FS        + DC +C DGFR+GQWCR L GCGHV+HRKC+D+WL
Sbjct: 83  GLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142

Query: 177 VRVSACPLCRRCVRL---DMEEHEI 198
           ++ S CP+CR  VRL   D +E E+
Sbjct: 143 LKASTCPICRARVRLWEEDPQEGEL 167

[Close]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match: sp|Q8LBA0|NIPL2_ARATH (NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 28/87 (32.18%), Postives = 45/87 (51.72%), Query Frame = 0 

Query: 104 FHSRRSQYSD-SSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGC 163
           +  R   Y +  + G S   L+KL  +  S+ +       C+ICL   + G+  R L  C
Sbjct: 136 YEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKC 195

Query: 164 GHVYHRKCIDSWLVRVSACPLCRRCVR 190
            H +H  C+D WL+R  +CP+CR+ V+
Sbjct: 196 DHTFHLVCVDKWLIRHGSCPICRQAVK 222

[Close]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match: sp|Q9FKX5|NIPL1_ARATH (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0 

Query: 115 SSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSW 174
           S G +   L ++ + R ++  +P   + CS+CL  F+ G+  R L  C H++H  CID W
Sbjct: 150 SKGLTGDSLNRIPKVRITD-TSPEI-VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 209

Query: 175 LVRVSACPLCRR 187
           L R ++CPLCRR
Sbjct: 210 LRRHASCPLCRR 219

[Close]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 29/90 (32.22%), Postives = 43/90 (47.78%), Query Frame = 0 

Query: 99  HRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRR 158
           H    F S   + S +  G +   +K +  +++ +        DCS+CL  F + +  R 
Sbjct: 98  HNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRL 157

Query: 159 LGGCGHVYHRKCIDSWLVRVSACPLCRRCV 189
           L  C H +H  CID+WL   S CPLCR  V
Sbjct: 158 LPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187

[Close]
BLAST of MELO3C004093.2 vs. TrEMBL
Match: tr|A0A0A0LJ61|A0A0A0LJ61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.5e-80
Identity = 199/204 (97.55%), Postives = 199/204 (97.55%), Query Frame = 0 

Query: 8   YIIQPYPQSPNFLQNSTHPSPPNKPQMPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXX 67
           YIIQPYPQSPNFLQNSTHPSPPN PQMPFQ SAAVSG PLXXXXXXXXXXXXXXXXXXXX
Sbjct: 30  YIIQPYPQSPNFLQNSTHPSPPNNPQMPFQPSAAVSGHPLXXXXXXXXXXXXXXXXXXXX 89

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLL 127
           XXXXXXXXXXXXXXXXXXXXXXXXXXX SALHRRRRFHSR SQYSDSSSGFSHRDLKKLL
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLL 149

Query: 128 QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC 187
           QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC
Sbjct: 150 QFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRC 209

Query: 188 VRLDMEEHEIDCVSSRNFELFYAL 212
           VRLDMEEHEIDCVSSRNFELFYAL
Sbjct: 210 VRLDMEEHEIDCVSSRNFELFYAL 233

[Close]
BLAST of MELO3C004093.2 vs. TrEMBL
Match: tr|A0A1S3BTK8|A0A1S3BTK8_CUCME (RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-67
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 34  MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 93
           MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPFQHSAAVSGDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 94  XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 153
           XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  XXSALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

Query: 154 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 212
           QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL
Sbjct: 121 QWCRRLGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLDMEEHEIDCVSSRNFELFYAL 178

[Close]
BLAST of MELO3C004093.2 vs. TrEMBL
Match: tr|A0A067KDU1|A0A067KDU1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07823 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 107 RRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCGHVY 166
           R S  S+S++G S +DLKKL QF+ S    P ++ DC +CLDG ++GQWCR+L GCGHV+
Sbjct: 64  RHSGPSNSTNGLSFKDLKKLPQFKISKKSKPEAEADCVVCLDGIKQGQWCRKLIGCGHVF 123

Query: 167 HRKCIDSWLVRVSACPLCRRCVRLDME 194
           HRKC+D+WLV+VSACP+CR  V L  E
Sbjct: 124 HRKCVDAWLVKVSACPICRTRVHLGSE 150

[Close]
BLAST of MELO3C004093.2 vs. TrEMBL
Match: tr|A0A2C9VMD0|A0A2C9VMD0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G025800 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.8e-23
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 104 FHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCG 163
           FH R S  SDS+ G S + LKKL QF+FS    P  + DC +CL+G R+GQWCR+L  CG
Sbjct: 66  FH-RHSGPSDSADGLSPKGLKKLPQFKFSRRTKPEDEADCVVCLEGIRQGQWCRKLIACG 125

Query: 164 HVYHRKCIDSWLVRVSACPLCRRCVRLD 192
           HV+HRKCID+WL++VSACP+CR  V LD
Sbjct: 126 HVFHRKCIDAWLIKVSACPVCRTRVWLD 152

[Close]
BLAST of MELO3C004093.2 vs. TrEMBL
Match: tr|H8ZJ02|H8ZJ02_MANES (RING-H2 zinc finger protein OS=Manihot esculenta OX=3983 GN=RZF PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.3e-23
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 104 FHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGQWCRRLGGCG 163
           FH R S  SDS+ G S + LKKL QF+FS    P  + DC +CL+G R+GQWCR+L  CG
Sbjct: 66  FH-RHSGPSDSAVGLSPKGLKKLPQFKFSRRTKPEDEADCVVCLEGIRQGQWCRKLIACG 125

Query: 164 HVYHRKCIDSWLVRVSACPLCRRCVRLD 192
           HV+HRKCID+WL++VSACP+CR  V LD
Sbjct: 126 HVFHRKCIDAWLIKVSACPVCRTRVWLD 152

The following BLAST results are available for this feature:
BLAST of MELO3C004093.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61089.13.8e-8097.55hypothetical protein Csa_2G047820 [Cucumis sativus][more]
XP_008452306.12.8e-67100.00PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo][more]
XP_004149098.11.0e-6497.75PREDICTED: RING-H2 finger protein ATL56 [Cucumis sativus][more]
XP_022997472.15.7e-5284.48RING-H2 finger protein ATL56-like [Cucurbita maxima][more]
XP_023546946.17.5e-5284.48RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C004093.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30370.11.2e-2252.87RING/U-box superfamily protein[more]
AT2G18670.12.0e-2254.12RING/U-box superfamily protein[more]
AT3G20395.11.7e-1043.64RING/U-box superfamily protein[more]
AT1G74410.16.6e-1032.18RING/U-box superfamily protein[more]
AT5G66070.28.7e-1038.89RING/U-box superfamily protein[more]
BLAST of MELO3C004093.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M0C3|ATL14_ARATH2.1e-2152.87RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1[more]
sp|Q9ZV51|ATL56_ARATH3.6e-2154.12RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1[more]
sp|Q8LBA0|NIPL2_ARATH1.2e-0832.18NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV... [more]
sp|Q9FKX5|NIPL1_ARATH1.6e-0838.89NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV... [more]
sp|Q9LF64|ATL52_ARATH2.0e-0832.22RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
BLAST of MELO3C004093.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ61|A0A0A0LJ61_CUCSA2.5e-8097.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 PE=4 SV=1[more]
tr|A0A1S3BTK8|A0A1S3BTK8_CUCME1.9e-67100.00RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1[more]
tr|A0A067KDU1|A0A067KDU1_JATCU1.7e-2357.47Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07823 PE=4 SV=1[more]
tr|A0A2C9VMD0|A0A2C9VMD0_MANES4.8e-2359.09Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G025800 PE=4 SV=... [more]
tr|H8ZJ02|H8ZJ02_MANES8.3e-2359.09RING-H2 zinc finger protein OS=Manihot esculenta OX=3983 GN=RZF PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004093.2.1MELO3C004093.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 143..184
e-value: 1.7E-7
score: 40.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 142..185
e-value: 3.6E-12
score: 46.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 143..185
score: 12.312
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..194
e-value: 1.1E-17
score: 65.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..55
NoneNo IPR availablePANTHERPTHR14155:SF93RING-H2 FINGER PROTEIN ATL19-RELATEDcoord: 50..189
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 50..189
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 123..192

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C004093.2Csa2G047820Cucumber (Chinese Long) v2cumedB132
MELO3C004093.2CSPI02G05570Wild cucumber (PI 183967)cpimedB132
MELO3C004093.2Cucsa.089780Cucumber (Gy14) v1cgymedB104
MELO3C004093.2CmaCh12G009980Cucurbita maxima (Rimu)cmamedB192
MELO3C004093.2CmaCh05G006650Cucurbita maxima (Rimu)cmamedB831
MELO3C004093.2CmoCh05G006980Cucurbita moschata (Rifu)cmomedB822
MELO3C004093.2CmoCh12G010080Cucurbita moschata (Rifu)cmomedB183
MELO3C004093.2Lsi11G007210Bottle gourd (USVL1VR-Ls)lsimedB123
MELO3C004093.2Cp4.1LG07g08400Cucurbita pepo (Zucchini)cpemedB915
MELO3C004093.2Cp4.1LG11g05930Cucurbita pepo (Zucchini)cpemedB129
MELO3C004093.2CsGy2G005710Cucumber (Gy14) v2cgybmedB118
MELO3C004093.2Cla022861Watermelon (97103) v1medwmB411
MELO3C004093.2ClCG11G012570Watermelon (Charleston Gray)medwcgB362
MELO3C004093.2Cla97C11G218430Watermelon (97103) v2medwmbB360
MELO3C004093.2Bhi06G001176Wax gourdmedwgoB456
MELO3C004093.2Carg23480Silver-seed gourdcarmedB0494
MELO3C004093.2Carg08354Silver-seed gourdcarmedB0062
MELO3C004093.2CsaV3_2G007920Cucumber (Chinese Long) v3cucmedB134
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004093.2Cucumber (Gy14) v2cgybmedB064
MELO3C004093.2Cucurbita maxima (Rimu)cmamedB081
MELO3C004093.2Cucurbita maxima (Rimu)cmamedB142
MELO3C004093.2Cucurbita moschata (Rifu)cmomedB075
MELO3C004093.2Cucurbita moschata (Rifu)cmomedB132
MELO3C004093.2Cucurbita pepo (Zucchini)cpemedB403
MELO3C004093.2Cucurbita pepo (Zucchini)cpemedB760
MELO3C004093.2Wild cucumber (PI 183967)cpimedB067
MELO3C004093.2Cucumber (Chinese Long) v2cumedB070
MELO3C004093.2Watermelon (Charleston Gray)medwcgB388
MELO3C004093.2Watermelon (97103) v1medwmB427
MELO3C004093.2Cucumber (Chinese Long) v3cucmedB075
MELO3C004093.2Watermelon (97103) v2medwmbB389
MELO3C004093.2Wax gourdmedwgoB494